KEGG   PATHWAY: tmn03040
Entry
tmn03040                    Pathway                                
Name
Spliceosome - Phaeoacremonium minimum
Description
After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.
Class
Genetic Information Processing; Transcription
Pathway map
tmn03040  Spliceosome
tmn03040

Other DBs
GO: 0005681
Organism
Phaeoacremonium minimum [GN:tmn]
Gene
UCRPA7_1346  [KO:K12860]
UCRPA7_1361  [KO:K12879]
UCRPA7_148  [KO:K12843]
UCRPA7_1583  [KO:K12813] [EC:3.6.4.13]
UCRPA7_1607  [KO:K10599] [EC:2.3.2.27]
UCRPA7_1669  [KO:K12830]
UCRPA7_1670  [KO:K12874]
UCRPA7_1671  [KO:K12878]
UCRPA7_168  [KO:K12829]
UCRPA7_1683  [KO:K12873]
UCRPA7_1736  [KO:K12863]
UCRPA7_1746  [KO:K12868]
UCRPA7_1752  [KO:K12834]
UCRPA7_1771  [KO:K12855]
UCRPA7_2061  [KO:K12833]
UCRPA7_2067  [KO:K12858] [EC:3.6.4.13]
UCRPA7_2306  [KO:K12839]
UCRPA7_2366  [KO:K12627]
UCRPA7_2434  [KO:K12811] [EC:3.6.4.13]
UCRPA7_2442  [KO:K12854] [EC:3.6.4.13]
UCRPA7_2590  [KO:K12840]
UCRPA7_2654  [KO:K12819]
UCRPA7_3029  [KO:K11092]
UCRPA7_3043  [KO:K06063]
UCRPA7_3082  [KO:K12847]
UCRPA7_318  [KO:K12861]
UCRPA7_3452  [KO:K12845]
UCRPA7_3460  [KO:K11097]
UCRPA7_3555  [KO:K13025] [EC:3.6.4.13]
UCRPA7_3556  [KO:K12827]
UCRPA7_3663  [KO:K12876]
UCRPA7_3758  [KO:K12852]
UCRPA7_3861  [KO:K12823] [EC:3.6.4.13]
UCRPA7_4032  [KO:K12828]
UCRPA7_4033  [KO:K12837]
UCRPA7_4039  [KO:K12621]
UCRPA7_4108  [KO:K11984]
UCRPA7_4401  [KO:K12818] [EC:3.6.4.13]
UCRPA7_4567  [KO:K11095]
UCRPA7_473  [KO:K12623]
UCRPA7_4874  [KO:K12849]
UCRPA7_4897  [KO:K12870]
UCRPA7_5008  [KO:K12857]
UCRPA7_5356  [KO:K12856]
UCRPA7_5410  [KO:K12812] [EC:3.6.4.13]
UCRPA7_5483  [KO:K12832]
UCRPA7_5542  [KO:K12859]
UCRPA7_555  [KO:K11094]
UCRPA7_557  [KO:K12867]
UCRPA7_5965  [KO:K12864]
UCRPA7_6149  [KO:K03283]
UCRPA7_6304  [KO:K12825]
UCRPA7_6365  [KO:K12817]
UCRPA7_6404  [KO:K12883]
UCRPA7_6534  [KO:K12862]
UCRPA7_6601  [KO:K12881]
UCRPA7_6671  [KO:K11086 K22138]
UCRPA7_6710  [KO:K11087]
UCRPA7_6891  [KO:K11096]
UCRPA7_6948  [KO:K12624]
UCRPA7_7018  [KO:K12826]
UCRPA7_7084  [KO:K12877]
UCRPA7_7210  [KO:K12815] [EC:3.6.4.13]
UCRPA7_7250  [KO:K11094]
UCRPA7_7406  [KO:K12816]
UCRPA7_7435  [KO:K12626]
UCRPA7_7572  [KO:K12836]
UCRPA7_7607  [KO:K12821]
UCRPA7_7613  [KO:K12625]
UCRPA7_7639  [KO:K12869]
UCRPA7_7640  [KO:K12844]
UCRPA7_7644  [KO:K12880]
UCRPA7_765  [KO:K12842]
UCRPA7_7695  [KO:K12662]
UCRPA7_7810  [KO:K11088]
UCRPA7_7818  [KO:K12846]
UCRPA7_7853  [KO:K12882]
UCRPA7_7854  [KO:K12831]
UCRPA7_853  [KO:K12820] [EC:3.6.4.13]
UCRPA7_8542  [KO:K11099]
UCRPA7_855  [KO:K11098]
UCRPA7_8588  [KO:K12733] [EC:5.2.1.8]
UCRPA7_8732  [KO:K12872]
UCRPA7_9  [KO:K11093]
UCRPA7_916  [KO:K03283]
UCRPA7_922  [KO:K12881]
UCRPA7_942  [KO:K12871]
Reference
  Authors
Wahl MC, Will CL, Luhrmann R
  Title
The spliceosome: design principles of a dynamic RNP machine.
  Journal
Cell 136:701-18 (2009)
DOI:10.1016/j.cell.2009.02.009
Reference
  Authors
Morris DP, Greenleaf AL
  Title
The splicing factor, Prp40, binds the phosphorylated carboxyl-terminal domain of RNA polymerase II.
  Journal
J Biol Chem 275:39935-43 (2000)
DOI:10.1074/jbc.M004118200
Reference
  Authors
Chen YI, Moore RE, Ge HY, Young MK, Lee TD, Stevens SW
  Title
Proteomic analysis of in vivo-assembled pre-mRNA splicing complexes expands the catalog of participating factors.
  Journal
Nucleic Acids Res 35:3928-44 (2007)
DOI:10.1093/nar/gkm347
Reference
  Authors
Ritchie DB, Schellenberg MJ, MacMillan AM
  Title
Spliceosome structure: piece by piece.
  Journal
Biochim Biophys Acta 1789:624-33 (2009)
DOI:10.1016/j.bbagrm.2009.08.010
KO pathway
ko03040   

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