SSDB Best Search Result

Entry:serj:SGUI_1450 (282 a.a.)
Name:ATP-dependent DNA ligase clustered with Ku protein, LigD
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 106 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
nca:Noca_1237 ATP dependent DNA ligase                  K01971     304     1041     0.589      280     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      959     0.545      277     
ase:ACPL_519 DNA ligase (ATP)                           K01971     301      929     0.514      276     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808      903     0.538      277     
stp:Strop_3967 DNA primase, small subunit               K01971     302      887     0.491      277     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      874     0.495      277     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      870     0.495      279     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      865     0.497      288     
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670      853     0.524      267     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      853     0.491      281     
sen:SACE_3549 DNA ligase (ATP)                          K01971     302      849     0.498      273     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      831     0.484      281     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      827     0.480      281     
msm:MSMEG_5570 DNA ligase                               K01971     755      806     0.478      272     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      790     0.481      266     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      783     0.473      277     
sma:SAVERM_2946 putative DNA ligase                     K01971     293      782     0.498      257     
sco:SCO5308 conserved hypothetical protein              K01971     293      781     0.485      264     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      780     0.466      281     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      780     0.466      281     
sgu:SGLAU_22865 DNA polymerase LigD, polymerase domain- K01971     290      770     0.489      264     
sct:SCAT_5459 conserved protein of unknown function     K01971     298      756     0.449      272     
sgr:SGR_2196 conserved hypothetical protein             K01971     296      727     0.478      268     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      572     0.385      260     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      568     0.365      271     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      548     0.357      266     
sro:Sros_6714 DNA primase small subunit                            334      530     0.352      273     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      529     0.356      275     
chy:CHY_0025 conserved hypothetical protein             K01971     293      523     0.339      271     
ssy:SLG_04290 putative DNA ligase                       K01971     835      506     0.346      254     
scl:sce3523 unnamed protein product; High confidence in K01971     762      504     0.364      264     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      502     0.326      261     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      496     0.327      260     
mta:Moth_2067 conserved hypothetical protein            K01971     312      481     0.321      274     
sno:Snov_0819 DNA ligase D                              K01971     842      480     0.335      266     
pde:Pden_4186 conserved hypothetical protein            K01971     330      474     0.353      238     
swi:Swit_5282 DNA ligase D                              K01971     658      472     0.330      264     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      466     0.328      265     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836      455     0.333      255     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      446     0.333      273     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      445     0.330      264     
cpy:Cphy_1729 DNA ligase D                              K01971     813      445     0.301      279     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      443     0.324      272     
phe:Phep_1702 DNA ligase D                              K01971     877      437     0.320      266     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      436     0.299      254     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      433     0.343      265     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      426     0.314      283     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      426     0.343      265     
oih:OB3034 hypothetical conserved protein               K01971     595      425     0.322      273     
dsy:DSY0616 hypothetical protein                        K01971     818      413     0.274      266     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      413     0.340      265     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      411     0.313      265     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      409     0.303      271     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      409     0.313      259     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      406     0.311      257     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      406     0.309      275     
xau:Xaut_4365 DNA ligase D                              K01971     886      403     0.310      271     
rle:pRL120229 putative DNA ligase family protein        K01971     881      403     0.306      271     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      403     0.297      286     
ppu:PP_3260 DNA ligase D                                K01971     833      393     0.322      255     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      393     0.300      260     
brh:RBRH_02846 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971     309      385     0.323      260     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884      365     0.282      259     
rpa:TX73_018915 DNA ligase D                            K01971     914      356     0.280      257     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      350     0.291      278     
ksk:KSE_05320 hypothetical protein                      K01971     173      259     0.346      130     
ecb:100072864 calcium uniporter regulatory subunit MCUb K22829     467      140     0.306      186     
cpoc:100725386 phosphatidylinositol 4,5-bisphosphate 3- K21289    1092      132     0.242      244     
ani:ANIA_04975 hypothetical protein                     K00306     441      128     0.354      96      
rno:298947 phosphatidylinositol 4,5-bisphosphate 3-kina K21289    1102      127     0.239      251     
ocu:100344144 phosphatidylinositol 4,5-bisphosphate 3-k K21289    1102      122     0.236      254     
bth:BT_4443 N-acetylmuramoyl alanine amidase            K01448     218      121     0.284      134     
ncr:NCU04366 hypothetical protein                                  255      120     0.281      128     
osa:4339287 uncharacterized protein                     K19787     494      120     0.246      203     
cjc:100394268 phosphatidylinositol 4,5-bisphosphate 3-k K21289    1102      119     0.220      246     
ljo:LJ_0202 methionyl-tRNA synthetase                   K01874     658      119     0.265      181     
vg:80537698 Circular ssDNA virus sp.; Rep                          311      117     0.274      164     
hsa:5294 phosphatidylinositol 4,5-bisphosphate 3-kinase K21289    1102      116     0.215      246     
fca:101096215 phosphatidylinositol 4,5-bisphosphate 3-k K21289    1130      116     0.239      222     
rcu:8282190 protein GDAP2 homolog isoform X1            K24997     561      116     0.241      257     
ptr:463649 phosphatidylinositol 4,5-bisphosphate 3-kina K21289    1102      116     0.215      246     
mmu:30955 phosphatidylinositol 4,5-bisphosphate 3-kinas K21289    1102      115     0.223      247     
gmx:100793020 1-aminocyclopropane-1-carboxylate synthas K20772     480      114     0.244      221     
cge:113838162 endogenous retrovirus group K member 113             541      113     0.261      180     
mtr:120575772 UDP-glucose flavonoid 3-O-glucosyltransfe            490      113     0.301      133     
mcc:698857 phosphatidylinositol 4,5-bisphosphate 3-kina K21289    1102      113     0.215      246     
lma:LMJF_31_1140 putative monoglyceride lipase          K01054     311      112     0.330      91      
cit:102613666 ACT domain-containing protein ACR8 isofor            444      111     0.240      229     
lil:LA_2892 hypothetical protein                                   328      110     0.382      55      
bvu:BVU_3940 phosphate ABC transporter, phosphate-bindi K02040     272      109     0.289      114     
maj:MAA_10100 hypothetical protein                                 313      108     0.286      161     
cin:100186093 uncharacterized protein LOC100186093      K28846     386      108     0.250      276     
smo:SELMODRAFT_112263 hypothetical protein                         401      107     0.299      137     
mdo:100024047 cytidine monophosphate-N-acetylneuraminic K08080     581      107     0.315      108     
sly:101259303 B3 domain-containing transcription factor K09287     319      106     0.262      149     
cel:CELE_Y73F8A.19 Copine C-terminal domain-containing             610      106     0.295      105     
sty:STY1036 putative prophage antitermination protein              265      105     0.326      86      
stm:STM1022 Gifsy-2 prophage putative molecular chapero            265      105     0.326      86      
sot:102596128 uncharacterized LOC102596128                         620      104     0.273      143     
sce:YDR236C riboflavin kinase                           K00861     218      104     0.302      96      
cdn:BN940_00431 Periplasmic divalent cation tolerance p K03926     134      101     0.331      121     
fvr:FVEG_15972 hypothetical protein                                308      100     0.228      197     
mba:Mbar_A0433 acetyl-CoA decarbonylase/synthase epsilo K00195     170      100     0.250      108     
ttm:Tthe_2056 phosphodiesterase, MJ0936 family          K07095     183       95     0.321      53      
xla:121403335 C-X-C motif chemokine 11-1-like                       99       89     0.284      74      
aae:aq_1187 putative protein                                       167       86     0.231      117     

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