KEGG   PATHWAY: achc04622
Entry
achc04622                   Pathway                                
Name
RIG-I-like receptor signaling pathway - Aquila chrysaetos chrysaetos (golden eagle)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
achc04622  RIG-I-like receptor signaling pathway
achc04622

Organism
Aquila chrysaetos chrysaetos (golden eagle) [GN:achc]
Gene
115334063  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
115334319  STING1; stimulator of interferon genes protein isoform X2 [KO:K12654]
115334335  IL12B; interleukin-12 subunit beta isoform X1 [KO:K05425]
115334823  MAPK13; mitogen-activated protein kinase 13 isoform X1 [KO:K04441] [EC:2.7.11.24]
115334828  [KO:K04441] [EC:2.7.11.24]
115335051  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
115335250  ATG5; autophagy protein 5 isoform X1 [KO:K08339]
115335375  TRAF2; TNF receptor-associated factor 2 isoform X1 [KO:K03173] [EC:2.3.2.27]
115335388  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
115335437  SIKE1; suppressor of IKBKE 1 isoform X1 [KO:K12656]
115336293  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
115336480  [KO:K05414]
115336539  ATG12; ubiquitin-like protein ATG12 [KO:K08336]
115336860  DDX58; antiviral innate immune response receptor RIG-I isoform X1 [KO:K12646] [EC:5.6.2.6]
115336915  MAP3K1; mitogen-activated protein kinase kinase kinase 1 isoform X2 [KO:K04416] [EC:2.7.11.25]
115337094  [KO:K05415]
115337096  [KO:K05415]
115337097  [KO:K05415]
115337413  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
115338180  [KO:K02581]
115338184  [KO:K02581]
115338798  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
115338912  AZI2; 5-azacytidine-induced protein 2 [KO:K12651]
115339312  ZNFX1; NFX1-type zinc finger-containing protein 1 isoform X2 [KO:K27391]
115340258  [KO:K10030]
115340259  [KO:K10030]
115340262  [KO:K10030]
115340268  [KO:K10030]
115340369  [KO:K08601] [EC:3.4.19.12]
115340642  [KO:K27391]
115340812  RNF125; LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF125 [KO:K12170] [EC:2.3.2.27]
115341221  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 isoform X1 [KO:K10652] [EC:2.3.2.27]
115341473  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
115341623  MAPK11; mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
115341838  MAPK12; mitogen-activated protein kinase 12 isoform X1 [KO:K04441] [EC:2.7.11.24]
115342550  [KO:K04398] [EC:3.4.22.61]
115342625  IFIH1; interferon-induced helicase C domain-containing protein 1 isoform X1 [KO:K12647] [EC:5.6.2.6]
115342910  TANK; TRAF family member-associated NF-kappa-B activator isoform X1 [KO:K12650]
115343323  CASP10; caspase-10 isoform X1 [KO:K04400] [EC:3.4.22.63]
115343326  [KO:K04398] [EC:3.4.22.61]
115343574  DDX3X; ATP-dependent RNA helicase DDX3X isoform X2 [KO:K11594] [EC:5.6.2.7]
115344346  MAVS; mitochondrial antiviral-signaling protein [KO:K12648]
115344587  TBKBP1; TANK-binding kinase 1-binding protein 1 isoform X1 [KO:K12652]
115344958  NLRX1; NLR family member X1 isoform X2 [KO:K12653]
115345144  DHX58; probable ATP-dependent RNA helicase DHX58 isoform X1 [KO:K12649] [EC:5.6.2.6]
115345654  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein [KO:K03171]
115345697  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD isoform X1 [KO:K08601] [EC:3.4.19.12]
115346426  ADAR; double-stranded RNA-specific adenosine deaminase [KO:K12968] [EC:3.5.4.37]
115347215  IL12A; LOW QUALITY PROTEIN: interleukin-12 subunit alpha [KO:K05406]
115347976  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
115348407  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
115348471  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
115350500  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
115351571  TKFC; triokinase/FMN cyclase [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
115351998  FADD; FAS-associated death domain protein [KO:K02373]
115352198  IRF7; interferon regulatory factor 7 isoform X2 [KO:K09447]
115352265  TRAF3; TNF receptor-associated factor 3 isoform X1 [KO:K03174]
115353096  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
115353383  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
121232898  [KO:K04416] [EC:2.7.11.25]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
achc04010  MAPK signaling pathway
achc04120  Ubiquitin mediated proteolysis
achc04210  Apoptosis
KO pathway
ko04622   

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