KEGG   PATHWAY: cel00510
Entry
cel00510                    Pathway                                
Name
N-Glycan biosynthesis - Caenorhabditis elegans (nematode)
Description
N-glycans or asparagine-linked glycans are major constituents of glycoproteins in eukaryotes. N-glycans are covalently attached to asparagine with the consensus sequence of Asn-X-Ser/Thr by an N-glycosidic bond, GlcNAc b1- Asn. Biosynthesis of N-glycans begins on the cytoplasmic face of the ER membrane with the transferase reaction of UDP-GlcNAc and the lipid-like precursor P-Dol (dolichol phosphate) to generate GlcNAc a1- PP-Dol. After sequential addition of monosaccharides by ALG glycosyltransferases [MD:M00055], the N-glycan precursor is attached by the OST (oligosaccharyltransferase) complex to the polypeptide chain that is being synthesized and translocated through the ER membrane. The protein-bound N-glycan precursor is subsequently trimmed, extended, and modified in the ER and Golgi by a complex series of reactions catalyzed by membrane-bound glycosidases and glycosyltransferases. N-glycans thus synthesized are classified into three types: high-mannose type, complex type, and hybrid type. Defects in N-glycan biosynthesis lead to a variety of human diseases known as congenital disorders of glycosylation [DS:H00118 H00119].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
cel00510  N-Glycan biosynthesis
cel00510

Module
cel_M00072  N-glycosylation by oligosaccharyltransferase [PATH:cel00510]
cel_M00073  N-glycan precursor trimming [PATH:cel00510]
Other DBs
GO: 0006487
Organism
Caenorhabditis elegans (nematode) [GN:cel]
Gene
CELE_B0024.13  srdf-3; Polyprenal reductase [KO:K12345] [EC:1.3.1.22 1.3.1.94]
CELE_B0361.8  algn-11; GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [KO:K03844] [EC:2.4.1.131]
CELE_B0416.6  gly-13; Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [KO:K00726] [EC:2.4.1.101]
CELE_C03E10.4  gly-20; Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [KO:K00736] [EC:2.4.1.143]
CELE_C08B11.8  algn-6; putative dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [KO:K03848] [EC:2.4.1.267]
CELE_C08H9.3  algn-8; Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase [KO:K03849] [EC:2.4.1.265]
CELE_C10F3.6  fut-8; Alpha-(1,6)-fucosyltransferase [KO:K00717] [EC:2.4.1.68]
CELE_C14A4.3  algn-9; Alpha-1,2-mannosyltransferase algn-9 [KO:K03846] [EC:2.4.1.259 2.4.1.261]
CELE_C52E4.5  mans-2; Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5 [KO:K01230] [EC:3.2.1.113]
CELE_C55B7.2  gly-2; Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [KO:K00744] [EC:2.4.1.155]
CELE_D2030.1  mans-1; alpha-1,2-Mannosidase [KO:K01230] [EC:3.2.1.113]
CELE_F09E5.2  algn-2; Alpha-1,3/1,6-mannosyltransferase ALG2 [KO:K03843] [EC:2.4.1.132 2.4.1.257]
CELE_F13H10.4  mogs-1; Mannosyl-oligosaccharide glucosidase [KO:K01228] [EC:3.2.1.106]
CELE_F28D1.11  dpm-3; putative dolichol-phosphate mannosyltransferase subunit 3 [KO:K09659]
CELE_F40F9.6  aagr-3; Glucosidase II subunit alpha [KO:K05546] [EC:3.2.1.207]
CELE_F48E3.1  gly-12; Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [KO:K00726] [EC:2.4.1.101]
CELE_F52D1.1  aagr-4; Glycoside hydrolase family 31 N-terminal domain-containing protein [KO:K05546] [EC:3.2.1.207]
CELE_F57B10.10  dad-1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit dad-1 [KO:K12668]
CELE_F58H1.1  aman-2; Alpha-mannosidase [KO:K01231] [EC:3.2.1.114]
CELE_H43I07.3  algn-5; Dolichyl-phosphate beta-glucosyltransferase [KO:K00729] [EC:2.4.1.117]
CELE_K09E4.2  algn-3; Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [KO:K03845] [EC:2.4.1.258]
CELE_M01A10.3  ostd-1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [KO:K12667]
CELE_M01F1.1  gly-14; Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [KO:K00726] [EC:2.4.1.101]
CELE_M02B7.4  algn-14; UDP-N-acetylglucosamine transferase subunit ALG14 [KO:K07441] [EC:2.4.1.141]
CELE_R10D12.12  algn-13; UDP-N-acetylglucosamine transferase subunit ALG13 [KO:K07432] [EC:2.4.1.141]
CELE_T03G11.4  mans-3; alpha-1,2-Mannosidase [KO:K23741]
CELE_T09A5.11  ostb-1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [KO:K12670]
CELE_T12A2.2  stt-3; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3 [KO:K07151] [EC:2.4.99.18]
CELE_T22D1.4  ribo-1; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [KO:K12666]
CELE_T24D1.4  algn-10; Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase [KO:K03850] [EC:2.4.1.256]
CELE_T26A5.4  algn-1; Chitobiosyldiphosphodolichol beta-mannosyltransferase [KO:K03842] [EC:2.4.1.142]
CELE_Y56A3A.36  dolk-1; dolichol kinase [KO:K00902] [EC:2.7.1.108]
CELE_Y57E12AM.1  tmem-258; Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit TMEM258 [KO:K26502]
CELE_Y60A3A.14  algn-7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [KO:K01001] [EC:2.7.8.15]
CELE_Y66H1A.2  dpm-1; Dolichol-phosphate mannosyltransferase subunit 1 [KO:K00721] [EC:2.4.1.83]
CELE_Y73E7A.7  bre-4; Beta-1,4-N-acetylgalactosaminyltransferase bre-4 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
CELE_ZC410.3  mans-4; alpha-1,2-Mannosidase [KO:K01230] [EC:3.2.1.113]
CELE_ZC513.5  algn-12; Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [KO:K03847] [EC:2.4.1.260]
CELE_ZK686.3  ZK686.3; putative dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 [KO:K19478]
Compound
C00096  GDP-mannose
C00110  Dolichyl phosphate
C00381  Dolichol
C00621  Dolichyl diphosphate
C01246  Dolichyl beta-D-glucosyl phosphate
C03021  Protein asparagine
C03862  Dolichyl phosphate D-mannose
C06081  Polyprenol
C22974  ditrans,polycis-Polyprenal
C22975  Dolichal
G00001  N-Acetyl-D-glucosaminyldiphosphodolichol
G00002  N,N'-Chitobiosyldiphosphodolichol
G00003  
G00004  
G00005  
G00006  
G00007  
G00008  
G00009  
G00010  
G00011  
G00012  
G00013  
G00014  
G00015  
G00016  Core fucose
G00017  
G00018  DS 3
G00019  
G00020  
G00021  
G00022  
G00171  
G10526  
G10595  
G10596  
G10597  
G10598  
G10599  
G10694  
Reference
PMID:9111134
  Authors
Schutzbach JS.
  Title
The role of the lipid matrix in the biosynthesis of dolichyl-linked oligosaccharides.
  Journal
Glycoconj J 14:175-82 (1997)
DOI:10.1023/A:1018533620002
Reference
  Authors
Oriol R, Martinez-Duncker I, Chantret I, Mollicone R, Codogno P.
  Title
Common origin and evolution of glycosyltransferases using Dol-P-monosaccharides as donor substrate.
  Journal
Mol Biol Evol 19:1451-63 (2002)
DOI:10.1093/oxfordjournals.molbev.a004208
Reference
  Authors
Thiel C, Schwarz M, Peng J, Grzmil M, Hasilik M, Braulke T, Kohlschutter A, von Figura K, Lehle L, Korner C.
  Title
A new type of congenital disorders of glycosylation (CDG-Ii) provides new insights into the early steps of dolichol-linked oligosaccharide biosynthesis.
  Journal
J Biol Chem 278:22498-505 (2003)
DOI:10.1074/jbc.M302850200
Reference
  Authors
Cipollo JF, Trimble RB, Chi JH, Yan Q, Dean N.
  Title
The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum.
  Journal
J Biol Chem 276:21828-40 (2001)
DOI:10.1074/jbc.M010896200
Reference
  Authors
Frank CG, Aebi M.
  Title
ALG9 mannosyltransferase is involved in two different steps of lipid-linked oligosaccharide biosynthesis.
  Journal
Glycobiology 15:1156-63 (2005)
DOI:10.1093/glycob/cwj002
Reference
  Authors
O'Reilly MK, Zhang G, Imperiali B.
  Title
In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesis.
  Journal
Biochemistry 45:9593-603 (2006)
DOI:10.1021/bi060878o
Related
pathway
cel00051  Fructose and mannose metabolism
cel00511  Other glycan degradation
cel00513  Various types of N-glycan biosynthesis
cel00515  Mannose type O-glycan biosynthesis
cel00520  Amino sugar and nucleotide sugar metabolism
cel00533  Glycosaminoglycan biosynthesis - keratan sulfate
cel00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
cel00900  Terpenoid backbone biosynthesis
KO pathway
ko00510   

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