KEGG   PATHWAY: ko05321
Entry
ko05321                     Pathway                                
Name
Inflammatory bowel disease
Description
Inflammatory bowel disease (IBD), which includes Crohn disease (CD) and ulcerative colitis (UC), is characterized by chronic inflammation of the gastrointestinal tract due to environmental and genetic factors, infectious microbes, and the dysregulated immune system. Although many environmental factors (for example, geographic locations, smoking, etc.) affect the development of IBD, the most crucial might be the luminal (external) environment of the epithelial cells. There are pathogens that are found in increasing frequency in IBD. The microbial components such as flagellin, peptidoglycan, and lipopolysaccharide are recognized by receptors such as toll-like receptors (TLRs) and nucleotide-binding oligomerization domain (NOD) proteins, and also by antigen-presenting cells (APCs) in genetically susceptible host. The TLR recognition triggers the activation of NF-kappaB, leading to an inflammatory response. APC-expressed gene NOD2 has been associated with Crohn disease. In case of mutations of NOD2, negative regulation of IL-12 production is reduced with the stimulation of muramyl dipeptide (MDP), leading to CD. In addition, the APC mediates the differentiation of naive T cells into effector T cells (Th1, Th17, Th2) and natural killer T (NKT) cells. Th1 and Th17 cells produce high levels of IFN-gamma and IL-17, -22, respectively, both of which promote CD. In contrast, Th2 cells produce IL-4, -5, -10, which together with IL-13 from NKT induce UC.
Class
Human Diseases; Immune disease
Pathway map
ko05321  Inflammatory bowel disease
ko05321

Disease
H01227  Inflammatory bowel disease (IBD)
Orthology
K02580  NFKB1; nuclear factor NF-kappa-B p105 subunit
K03156  TNF, TNFA; tumor necrosis factor superfamily, member 2
K04383  IL1A; interleukin 1 alpha
K04446  NFATC1, NFAT2, NFATC; nuclear factor of activated T-cells, cytoplasmic 1
K04448  JUN; transcription factor AP-1
K04500  SMAD2; mothers against decapentaplegic homolog 2
K04519  IL1B; interleukin 1 beta
K04687  IFNG; interferon gamma
K04692  STAT3; signal transducer and activator of transcription 3
K04735  RELA; transcription factor p65
K05063  IL12RB1, CD212; interleukin 12 receptor beta-1
K05064  IL12RB2; interleukin 12 receptor beta-2
K05065  IL23R; interleukin 23 receptor
K05070  IL2RG, CD132; interleukin 2 receptor gamma
K05071  IL4R, CD124; interleukin 4 receptor
K05075  IL21R, CD360; interleukin 21 receptor
K05132  IFNGR1, CD119; interferon gamma receptor 1
K05133  IFNGR2; interferon gamma receptor 2
K05173  IL18R1, IL1RRP, CD218a; interleukin 18 receptor 1
K05174  IL18RAP, ACPL, CD218b; interleukin 18 receptor accessory protein
K05405  IL6; interleukin 6
K05406  IL12A; interleukin 12A
K05425  IL12B; interleukin 12B
K05426  IL23A; interleukin 23 subunit alpha
K05428  IL5; interleukin 5
K05429  IL2; interleukin 2
K05430  IL4; interleukin 4
K05434  IL21; interleukin 21
K05435  IL13; interleukin 13
K05443  IL10, CSIF; interleukin 10
K05445  IL22, IL-TIF; interleukin 22
K05482  IL18, IL1F4; interleukin 18
K05489  IL17A, CTLA8; interleukin 17A
K05494  IL17F, ML1; interleukin 17F
K06752  MHC2; MHC class II antigen
K08532  NR1F1, RORA; RAR-related orphan receptor alpha
K08534  NR1F3, RORC; RAR-related orphan receptor gamma
K09035  CMAF, MAF; transcription factor Maf
K10159  TLR2, CD282; toll-like receptor 2
K10160  TLR4, CD284; toll-like receptor 4
K10163  FOXP3, IPEX; forkhead box P3
K10165  NOD2, CARD15; nucleotide-binding oligomerization domain-containing protein 2
K10166  TBX21; T-box protein 21
K10168  TLR5; toll-like receptor 5
K10784  TRAV; T cell receptor alpha chain V region
K10785  TRBV; T-cell receptor beta chain V region
K11220  STAT1; signal transducer and activator of transcription 1
K11222  STAT4; signal transducer and activator of transcription 4
K11225  STAT6; signal transducer and activator of transcription 6
K13375  TGFB1; transforming growth factor beta-1
K13376  TGFB2; transforming growth factor beta-2
K13377  TGFB3; transforming growth factor beta-3
K17895  GATA3; GATA-binding protein 3
K23605  SMAD3; mothers against decapentaplegic homolog 3
Reference
  Authors
Melmed GY, Targan SR
  Title
Future biologic targets for IBD: potentials and pitfalls.
  Journal
Nat Rev Gastroenterol Hepatol 7:110-7 (2010)
DOI:10.1038/nrgastro.2009.218
Reference
  Authors
Shih DQ, Targan SR
  Title
Immunopathogenesis of inflammatory bowel disease.
  Journal
World J Gastroenterol 14:390-400 (2008)
DOI:10.3748/wjg.14.390
Reference
  Authors
Baumgart DC, Carding SR
  Title
Inflammatory bowel disease: cause and immunobiology.
  Journal
Lancet 369:1627-40 (2007)
DOI:10.1016/S0140-6736(07)60750-8
Reference
  Authors
Strober W, Murray PJ, Kitani A, Watanabe T
  Title
Signalling pathways and molecular interactions of NOD1 and NOD2.
  Journal
Nat Rev Immunol 6:9-20 (2006)
DOI:10.1038/nri1747
Reference
  Authors
Matricon J, Barnich N, Ardid D
  Title
Immunopathogenesis of inflammatory bowel disease.
  Journal
Self Nonself 1:299-309 (2010)
DOI:10.4161/self.1.4.13560
Reference
  Authors
Agnello D, Lankford CS, Bream J, Morinobu A, Gadina M, O'Shea JJ, Frucht DM
  Title
Cytokines and transcription factors that regulate T helper cell differentiation: new players and new insights.
  Journal
J Clin Immunol 23:147-61 (2003)
DOI:10.1023/A:1023381027062
Reference
  Authors
Glimcher LH, Murphy KM
  Title
Lineage commitment in the immune system: the T helper lymphocyte grows up.
  Journal
Genes Dev 14:1693-711 (2000)
DOI:10.1101/gad.14.14.1693
Reference
  Authors
Neurath MF, Finotto S, Glimcher LH
  Title
The role of Th1/Th2 polarization in mucosal immunity.
  Journal
Nat Med 8:567-73 (2002)
DOI:10.1038/nm0602-567
Reference
  Authors
Afkarian M, Sedy JR, Yang J, Jacobson NG, Cereb N, Yang SY, Murphy TL, Murphy KM
  Title
T-bet is a STAT1-induced regulator of IL-12R expression in naive CD4+ T cells.
  Journal
Nat Immunol 3:549-57 (2002)
DOI:10.1038/ni794
Reference
  Authors
Sartor RB
  Title
Microbial influences in inflammatory bowel diseases.
  Journal
Gastroenterology 134:577-94 (2008)
DOI:10.1053/j.gastro.2007.11.059
Reference
PMID:9759857
  Authors
Yoshimoto T, Takeda K, Tanaka T, Ohkusu K, Kashiwamura S, Okamura H, Akira S, Nakanishi K
  Title
IL-12 up-regulates IL-18 receptor expression on T cells, Th1 cells, and B cells: synergism with IL-18 for IFN-gamma production.
  Journal
J Immunol 161:3400-7 (1998)
Reference
  Authors
Hur SJ, Kang SH, Jung HS, Kim SC, Jeon HS, Kim IH, Lee JD
  Title
Review of natural products actions on cytokines in inflammatory bowel disease.
  Journal
Nutr Res 32:801-16 (2012)
DOI:10.1016/j.nutres.2012.09.013
Reference
  Authors
Bettelli E, Korn T, Oukka M, Kuchroo VK
  Title
Induction and effector functions of T(H)17 cells.
  Journal
Nature 453:1051-7 (2008)
DOI:10.1038/nature07036
Reference
  Authors
Ivanov II, Zhou L, Littman DR
  Title
Transcriptional regulation of Th17 cell differentiation.
  Journal
Semin Immunol 19:409-17 (2007)
DOI:10.1016/j.smim.2007.10.011
Reference
  Authors
Di Cesare A, Di Meglio P, Nestle FO
  Title
The IL-23/Th17 axis in the immunopathogenesis of psoriasis.
  Journal
J Invest Dermatol 129:1339-50 (2009)
DOI:10.1038/jid.2009.59
Reference
  Authors
Jetten AM
  Title
Retinoid-related orphan receptors (RORs): critical roles in development, immunity, circadian rhythm, and cellular metabolism.
  Journal
Nucl Recept Signal 7:e003 (2009)
DOI:10.1621/nrs.07003
Reference
  Authors
Bene L, Falus A, Baffy N, Fulop AK
  Title
Cellular and molecular mechanisms in the two major forms of inflammatory bowel disease.
  Journal
Pathol Oncol Res 17:463-72 (2011)
DOI:10.1007/s12253-011-9397-4
Related
pathway
ko04060  Cytokine-cytokine receptor interaction
ko04612  Antigen processing and presentation
ko04620  Toll-like receptor signaling pathway
ko04621  NOD-like receptor signaling pathway
ko04630  JAK-STAT signaling pathway
ko04659  Th17 cell differentiation
ko04660  T cell receptor signaling pathway

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