PATHWAY: mmu04142 Help
Entry
Name
Lysosome - Mus musculus (house mouse)
Description
Lysosomes are membrane-delimited organelles in animal cells serving as the cell's main digestive compartment to which all sorts of macromolecules are delivered for degradation. They contain more than 40 hydrolases in an acidic environment (pH of about 5). After synthesis in the ER, lysosomal enzymes are decorated with mannose-6-phosphate residues, which are recognized by mannose-6-phosphate receptors in the trans-Golgi network. They are packaged into clathrin-coated vesicles and are transported to late endosomes. Substances for digestion are acquired by the lysosomes via a series of processes including endocytosis, phagocytosis, and autophagy.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Mus musculus (house mouse) [GN:
mmu ]
Gene
11975 Atp6v0a1; ATPase, H+ transporting, lysosomal V0 subunit A1 [KO:K02154 ]
21871 Atp6v0a2; ATPase, H+ transporting, lysosomal V0 subunit A2 [KO:K02154 ]
27060 Tcirg1; T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 [KO:K02154 ]
140494 Atp6v0a4; ATPase, H+ transporting, lysosomal V0 subunit A4 [KO:K02154 ]
11972 Atp6v0d1; ATPase, H+ transporting, lysosomal V0 subunit D1 [KO:K02146 ]
242341 Atp6v0d2; ATPase, H+ transporting, lysosomal V0 subunit D2 [KO:K02146 ]
108664 Atp6v1h; ATPase, H+ transporting, lysosomal V1 subunit H [KO:K02144 ]
54411 Atp6ap1; ATPase, H+ transporting, lysosomal accessory protein 1 [KO:K03662 ]
11984 Atp6v0c; ATPase, H+ transporting, lysosomal V0 subunit C [KO:K02155 ]
114143 Atp6v0b; ATPase, H+ transporting, lysosomal V0 subunit B [KO:K03661 ]
16541 Napsa; napsin A aspartic peptidase [KO:K08565 ] [EC:3.4.23.-]
14667 Gm2a; GM2 ganglioside activator protein [KO:K12383 ]
16783 Lamp1; lysosomal-associated membrane protein 1 [KO:K06528 ]
16784 Lamp2; lysosomal-associated membrane protein 2 [KO:K06528 ]
239739 Lamp3; lysosomal-associated membrane protein 3 [KO:K06562 ]
12492 Scarb2; scavenger receptor class B, member 2 [KO:K12384 ]
18145 Npc1; NPC intracellular cholesterol transporter 1 [KO:K12385 ]
67963 Npc2; NPC intracellular cholesterol transporter 2 [KO:K13443 ]
235504 Slc17a5; solute carrier family 17 (anion/sugar transporter), member 5 [KO:K12301 ]
18173 Slc11a1; solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 [KO:K12347 ]
18174 Slc11a2; solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 [KO:K21398 ]
114128 Laptm4b; lysosomal-associated protein transmembrane 4B [KO:K12387 ]
17775 Laptm4a; lysosomal-associated protein transmembrane 4A [KO:K12387 ]
16792 Laptm5; lysosomal-associated protein transmembrane 5 [KO:K12387 ]
11305 Abca2; ATP-binding cassette, sub-family A member 2 [KO:K05642 ]
56325 Abcb9; ATP-binding cassette, sub-family B member 9 [KO:K05656 ]
12752 Cln3; CLN3 lysosomal/endosomal transmembrane protein, battenin [KO:K12389 ]
72175 Mfsd8; major facilitator superfamily domain containing 8 [KO:K12307 ]
432486 Gnptab; N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits [KO:K08239 ] [EC:2.7.8.17 ]
214505 Gnptg; N-acetylglucosamine-1-phosphotransferase, gamma subunit [KO:K10087 ]
27426 Nagpa; N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [KO:K01125 ] [EC:3.1.4.45 ]
16004 Igf2r; insulin-like growth factor 2 receptor [KO:K06564 ]
17113 M6pr; mannose-6-phosphate receptor, cation dependent [KO:K10089 ]
11765 Ap1g1; adaptor protein complex AP-1, gamma 1 subunit [KO:K12391 ]
11766 Ap1g2; adaptor protein complex AP-1, gamma 2 subunit [KO:K12391 ]
11764 Ap1b1; adaptor protein complex AP-1, beta 1 subunit [KO:K12392 ]
11767 Ap1m1; adaptor-related protein complex AP-1, mu subunit 1 [KO:K12393 ]
11768 Ap1m2; adaptor protein complex AP-1, mu 2 subunit [KO:K12393 ]
108012 Ap1s2; adaptor-related protein complex 1, sigma 2 subunit [KO:K12394 ]
11769 Ap1s1; adaptor protein complex AP-1, sigma 1 [KO:K12394 ]
252903 Ap1s3; adaptor-related protein complex AP-1, sigma 3 [KO:K12395 ]
11776 Ap3d1; adaptor-related protein complex 3, delta 1 subunit [KO:K12396 ]
11774 Ap3b1; adaptor-related protein complex 3, beta 1 subunit [KO:K12397 ]
11775 Ap3b2; adaptor-related protein complex 3, beta 2 subunit [KO:K12397 ]
55946 Ap3m1; adaptor-related protein complex 3, mu 1 subunit [KO:K12398 ]
64933 Ap3m2; adaptor-related protein complex 3, mu 2 subunit [KO:K12398 ]
11778 Ap3s2; adaptor-related protein complex 3, sigma 2 subunit [KO:K12399 ]
11777 Ap3s1; adaptor-related protein complex 3, sigma 1 subunit [KO:K12399 ]
108011 Ap4e1; adaptor-related protein complex AP-4, epsilon 1 [KO:K12400 ]
67489 Ap4b1; adaptor-related protein complex AP-4, beta 1 [KO:K12401 ]
11781 Ap4m1; adaptor-related protein complex AP-4, mu 1 [KO:K12402 ]
11782 Ap4s1; adaptor-related protein complex AP-4, sigma 1 [KO:K12403 ]
106039 Gga1; golgi associated, gamma adaptin ear containing, ARF binding protein 1 [KO:K12404 ]
260302 Gga3; golgi associated, gamma adaptin ear containing, ARF binding protein 3 [KO:K12404 ]
74105 Gga2; golgi associated, gamma adaptin ear containing, ARF binding protein 2 [KO:K12404 ]
Compound
Reference
Authors
Eskelinen EL, Tanaka Y, Saftig P
Title
At the acidic edge: emerging functions for lysosomal membrane proteins.
Journal
Reference
Authors
Neufeld EF
Title
Lysosomal storage diseases.
Journal
Reference
Authors
von Figura K, Hasilik A
Title
Lysosomal enzymes and their receptors.
Journal
Reference
Authors
Janvier K, Bonifacino JS
Title
Role of the endocytic machinery in the sorting of lysosome-associated membrane proteins.
Journal
Reference
Authors
Vergarajauregui S, Puertollano R
Title
Mucolipidosis type IV: the importance of functional lysosomes for efficient autophagy.
Journal
Reference
Authors
Jaskolka MC, Winkley SR, Kane PM
Title
RAVE and Rabconnectin-3 Complexes as Signal Dependent Regulators of Organelle Acidification.
Journal
Reference
Authors
Majdoul S, Compton AA
Title
Lessons in self-defence: inhibition of virus entry by intrinsic immunity.
Journal
Related pathway
mmu04130 SNARE interactions in vesicular transport
KO pathway
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