KEGG   PATHWAY: myum04640
Entry
myum04640                   Pathway                                
Name
Hematopoietic cell lineage - Myotis yumanensis (Yuma myotis)
Description
Blood-cell development progresses from a hematopoietic stem cell (HSC), which can undergo either self-renewal or differentiation into a multilineage committed progenitor cell: a common lymphoid progenitor (CLP) or a common myeloid progenitor (CMP). A CLP gives rise to the lymphoid lineage of white blood cells or leukocytes-the natural killer (NK) cells and the T and B lymphocytes. A CMP gives rise to the myeloid lineage, which comprises the rest of the leukocytes, the erythrocytes (red blood cells), and the megakaryocytes that produce platelets important in blood clotting. Cells undergoing these differentiation process express a stage- and lineage-specific set of surface markers. Therefore cellular stages are identified by the specific expression patterns of these genes.
Class
Organismal Systems; Immune system
Pathway map
myum04640  Hematopoietic cell lineage
myum04640

Organism
Myotis yumanensis (Yuma myotis) [GN:myum]
Gene
138992591  IL5RA; interleukin-5 receptor subunit alpha [KO:K05067]
138992948  IL7; interleukin-7 isoform X1 [KO:K05431]
138994073  ITGB3; integrin beta-3 isoform X1 [KO:K06493]
138994286  CD7; T-cell antigen CD7 [KO:K06457]
138994464  GP1BA; platelet glycoprotein Ib alpha chain [KO:K06261]
138994774  ITGA3; integrin alpha-3 [KO:K06482]
138995032  CSF3; granulocyte colony-stimulating factor [KO:K05423]
138995118  ITGA2B; integrin alpha-IIb isoform X1 [KO:K06476]
138995363  [KO:K06448]
138995374  [KO:K06448]
138995399  CD2; T-cell surface antigen CD2 [KO:K06449]
138995403  [KO:K06448]
138995457  CSF1; macrophage colony-stimulating factor 1 isoform X1 [KO:K05453]
138995541  [KO:K06448]
138995589  [KO:K06448]
138995661  [KO:K06448]
138995770  CD34; hematopoietic progenitor cell antigen CD34 isoform X1 [KO:K06474]
138995803  FCGR1A; high affinity immunoglobulin gamma Fc receptor I [KO:K06498]
138995804  KIT; mast/stem cell growth factor receptor Kit isoform X1 [KO:K05091] [EC:2.7.10.1]
138995861  [KO:K06448]
138995877  CR1; complement receptor type 1 isoform X1 [KO:K04011]
138995878  CR2; complement receptor type 2 isoform X1 [KO:K04012]
138995881  CD55; complement decay-accelerating factor isoform X1 [KO:K04006]
138995889  [KO:K04012]
138996027  IL6R; interleukin-6 receptor subunit alpha isoform X1 [KO:K05055]
138996187  [KO:K06448]
138996845  CD22; B-cell receptor CD22 isoform X1 [KO:K06467]
138997444  CD38; ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 isoform X1 [KO:K01242] [EC:3.2.2.6 2.4.99.20]
138997696  GP1BB; platelet glycoprotein Ib beta chain [KO:K06262]
138998646  ANPEP; aminopeptidase N [KO:K11140] [EC:3.4.11.2]
138999308  [KO:K06856]
138999617  [KO:K06473]
138999620  [KO:K06473]
138999787  FLT3LG; LOW QUALITY PROTEIN: fms-related tyrosine kinase 3 ligand [KO:K05454]
138999788  CD37; leukocyte antigen CD37 [KO:K06475]
139000540  CSF2RA; granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X1 [KO:K05066]
139000558  IL3RA; interleukin-3 receptor subunit alpha [KO:K04737]
139000572  [KO:K05066]
139001728  CSF3R; granulocyte colony-stimulating factor receptor [KO:K05061]
139002665  THPO; LOW QUALITY PROTEIN: thrombopoietin [KO:K06854]
139003944  TFRC; transferrin receptor protein 1 [KO:K06503]
139003982  GP5; platelet glycoprotein V [KO:K06260]
139004165  MME; neprilysin [KO:K01389] [EC:3.4.24.11]
139005705  CD4; T-cell surface glycoprotein CD4 [KO:K06454]
139006358  IL2RA; interleukin-2 receptor subunit alpha [KO:K05068]
139006772  FLT3; receptor-type tyrosine-protein kinase FLT3 [KO:K05092] [EC:2.7.10.1]
139006857  KITLG; kit ligand isoform X1 [KO:K05461]
139007066  ITGA5; integrin alpha-5 [KO:K06484]
139007416  CD9; CD9 antigen [KO:K06460]
139008193  EPO; erythropoietin [KO:K05437]
139008478  ITGA2; integrin alpha-2 [KO:K06481]
139008480  ITGA1; integrin alpha-1 [KO:K06480]
139008523  IL7R; interleukin-7 receptor subunit alpha isoform X1 [KO:K05072]
139009252  [KO:K05071]
139009268  CD19; B-lymphocyte antigen CD19 isoform X1 [KO:K06465]
139009354  ITGAM; integrin alpha-M [KO:K06461]
139009366  [KO:K05071]
139009533  IL9R; interleukin-9 receptor [KO:K05073]
139010119  IL4; interleukin-4 [KO:K05430]
139010121  IL3; interleukin-3 [KO:K04736]
139010328  CSF1R; macrophage colony-stimulating factor 1 receptor [KO:K05090] [EC:2.7.10.1]
139010406  CD14; monocyte differentiation antigen CD14 [KO:K04391]
139010500  IL5; interleukin-5 [KO:K05428]
139010596  GYPA; glycophorin-A isoform X1 [KO:K06575]
139010959  EPOR; erythropoietin receptor isoform X1 [KO:K05079]
139011287  FCER2; low affinity immunoglobulin epsilon Fc receptor [KO:K06468]
139011682  CSF2; granulocyte-macrophage colony-stimulating factor [KO:K05427]
139012600  [KO:K06752]
139012601  [KO:K06752]
139012602  [KO:K06752]
139012604  [KO:K06752]
139012605  [KO:K06752]
139012606  [KO:K06752]
139012607  [KO:K06752]
139012608  [KO:K06752]
139012635  [KO:K06752]
139012640  [KO:K06752]
139012644  [KO:K06752]
139012645  [KO:K06752]
139012647  [KO:K06752]
139012648  [KO:K06752]
139012649  [KO:K06752]
139012650  [KO:K06752]
139012651  [KO:K06752]
139013270  [KO:K06752]
139013271  [KO:K06752]
139013272  [KO:K06752]
139013273  [KO:K06752]
139013297  TNF; tumor necrosis factor isoform X1 [KO:K03156]
139014434  GP9; platelet glycoprotein IX [KO:K06263]
139014935  [KO:K06448]
139014936  [KO:K06448]
139015186  ITGA4; integrin alpha-4 isoform X1 [KO:K06483]
139015231  ITGA6; integrin alpha-6 isoform X1 [KO:K06485]
139015408  [KO:K06448]
139015409  [KO:K06448]
139015509  [KO:K06448]
139015510  [KO:K06448]
139015511  [KO:K06448]
139015512  [KO:K06448]
139015513  [KO:K06448]
139016471  CD36; platelet glycoprotein 4 [KO:K06259]
139016984  IL6; interleukin-6 [KO:K05405]
139017560  CD3E; T-cell surface glycoprotein CD3 epsilon chain isoform X1 [KO:K06451]
139017562  CD3D; T-cell surface glycoprotein CD3 delta chain [KO:K06450]
139017769  CD5; T-cell surface glycoprotein CD5 [KO:K06455]
139017859  [KO:K04008]
139018326  CD3G; T-cell surface glycoprotein CD3 gamma chain [KO:K06452]
139018853  [KO:K04008]
139018864  CD44; CD44 antigen isoform X1 [KO:K06256]
139018981  [KO:K06466]
139019495  CD8B; T-cell surface glycoprotein CD8 beta chain [KO:K06459]
139019504  IL1B; interleukin-1 beta [KO:K04519]
139019505  IL1A; interleukin-1 alpha [KO:K04383]
139019531  IL1R2; interleukin-1 receptor type 2 [KO:K04387]
139020075  CD8A; T-cell surface glycoprotein CD8 alpha chain [KO:K06458]
139020135  IL1R1; interleukin-1 receptor type 1 isoform X1 [KO:K04386]
139021090  IL11RA; interleukin-11 receptor subunit alpha [KO:K05056]
139021481  DNTT; DNA nucleotidylexotransferase [KO:K00977] [EC:2.7.7.31]
Reference
  Authors
Janeway CA Jr, Travers P, Walport M, Shlomchik MJ
  Title
Immunobiology - International editon: The immune system in health and disease
  Journal
Harcourt Publishers Ltd, a subsidiary of Harcourt International Ltd (2001)
Reference
  Authors
Abe T
  Title
[Atlas of malignancies in hematopoietic organ - Morphology, immunology, chromosome and gene] (In Japanese)
  Journal
Nihonijishinhousya (2000)
Reference
  Authors
Rothenberg EV, Taghon T.
  Title
Molecular genetics of T cell development.
  Journal
Annu Rev Immunol 23:601-49 (2005)
DOI:10.1146/annurev.immunol.23.021704.115737
Reference
  Authors
Ceredig R, Rolink T.
  Title
A positive look at double-negative thymocytes.
  Journal
Nat Rev Immunol 2:888-97 (2002)
DOI:10.1038/nri937
Reference
  Authors
de Bruijn MF, Speck NA.
  Title
Core-binding factors in hematopoiesis and immune function.
  Journal
Oncogene 23:4238-48 (2004)
DOI:10.1038/sj.onc.1207763
Reference
  Authors
Radtke F, Wilson A, Mancini SJ, MacDonald HR.
  Title
Notch regulation of lymphocyte development and function.
  Journal
Nat Immunol 5:247-53 (2004)
DOI:10.1038/ni1045
Reference
  Authors
Spits H.
  Title
Development of alphabeta T cells in the human thymus.
  Journal
Nat Rev Immunol 2:760-72 (2002)
DOI:10.1038/nri913
Reference
PMID:9927518
  Authors
Di Santo JP, Aifantis I, Rosmaraki E, Garcia C, Feinberg J, Fehling HJ, Fischer A, von Boehmer H, Rocha B.
  Title
The common cytokine receptor gamma chain and the pre-T cell receptor provide independent but critically overlapping signals in early alpha/beta T cell development.
  Journal
J Exp Med 189:563-74 (1999)
DOI:10.1084/jem.189.3.563
Reference
  Authors
Mak TW, Penninger JM, Ohashi PS.
  Title
Knockout mice: a paradigm shift in modern immunology.
  Journal
Nat Rev Immunol 1:11-9 (2001)
DOI:10.1038/35095551
Reference
  Authors
Shapiro-Shelef M, Calame K.
  Title
Regulation of plasma-cell development.
  Journal
Nat Rev Immunol 5:230-42 (2005)
DOI:10.1038/nri1572
Reference
  Authors
Maillard I, Adler SH, Pear WS.
  Title
Notch and the immune system.
  Journal
Immunity 19:781-91 (2003)
DOI:10.1016/S1074-7613(03)00325-X
Reference
  Authors
Alpdogan O, van den Brink MR.
  Title
IL-7 and IL-15: therapeutic cytokines for immunodeficiency.
  Journal
Trends Immunol 26:56-64 (2005)
DOI:10.1016/j.it.2004.11.002
KO pathway
ko04640   

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