Entry
Name
Endocytosis - Molossus molossus (Pallas's mastiff bat)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Molossus molossus (Pallas's mastiff bat) [GN:
mmf ]
Gene
118625997 ZFYVE9; zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
118641786 ZFYVE16; zinc finger FYVE domain-containing protein 16 [KO:K04679 ]
118618734 SMAD2; mothers against decapentaplegic homolog 2 isoform X1 [KO:K04500 ]
118635958 SH3KBP1; SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
118625223 BIN1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
118626586 EPS15; epidermal growth factor receptor substrate 15 isoform X1 [KO:K12472 ]
118643566 EPS15L1; epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
118626635 LDLRAP1; low density lipoprotein receptor adapter protein 1 [KO:K12474 ]
118619836 WASL; neural Wiskott-Aldrich syndrome protein isoform X1 [KO:K23612 ]
118620002 ACTR3B; LOW QUALITY PROTEIN: actin-related protein 3B [KO:K18584 ]
118641961 ARPC1A; actin-related protein 2/3 complex subunit 1A isoform X1 [KO:K05757 ]
118635289 LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 2-like [KO:K05758 ]
118637223 LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 2-like [KO:K05758 ]
118625144 ARPC2; actin-related protein 2/3 complex subunit 2 isoform X1 [KO:K05758 ]
118633033 ARPC4; actin-related protein 2/3 complex subunit 4 isoform X1 [KO:K05755 ]
118635357 actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
118629871 ARPC5L; actin-related protein 2/3 complex subunit 5-like protein isoform X1 [KO:K05754 ]
118620064 WIPF3; WAS/WASL-interacting protein family member 3 isoform X1 [KO:K19475 ]
118625168 WIPF1; WAS/WASL-interacting protein family member 1 isoform X1 [KO:K19475 ]
118627194 DNAJC6; putative tyrosine-protein phosphatase auxilin isoform X1 [KO:K09526 ]
118619877 CAPZA2; F-actin-capping protein subunit alpha-2 isoform X1 [KO:K10364 ]
118620081 LOW QUALITY PROTEIN: F-actin-capping protein subunit alpha-1-like [KO:K10364 ]
118626495 CAPZB; F-actin-capping protein subunit beta isoform X1 [KO:K10365 ]
118640242 VPS29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
118640193 VPS26B; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
118632399 VPS26A; vacuolar protein sorting-associated protein 26A [KO:K18466 ]
118638517 VPS35; vacuolar protein sorting-associated protein 35 isoform X1 [KO:K18468 ]
118634370 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
118638465 STAM; signal transducing adapter molecule 1 isoform X1 [KO:K04705 ]
118625457 STAM2; signal transducing adapter molecule 2 isoform X1 [KO:K04705 ]
118628221 TSG101; tumor susceptibility gene 101 protein isoform X1 [KO:K12183 ]
118643280 VPS28; vacuolar protein sorting-associated protein 28 homolog [KO:K12184 ]
118640154 VPS37B; vacuolar protein sorting-associated protein 37B [KO:K12185 ]
118629044 VPS37C; vacuolar protein sorting-associated protein 37C isoform X1 [KO:K12185 ]
118642606 VPS37D; vacuolar protein sorting-associated protein 37D [KO:K12185 ]
118622836 VPS37A; vacuolar protein sorting-associated protein 37A [KO:K12185 ]
118622571 VPS36; vacuolar protein-sorting-associated protein 36 [KO:K12190 ]
118634281 VPS25; vacuolar protein-sorting-associated protein 25 [KO:K12189 ]
118627796 CHMP4A; LOW QUALITY PROTEIN: charged multivesicular body protein 4a [KO:K12194 ]
118616218 CHMP7; charged multivesicular body protein 7 isoform X1 [KO:K15053 ]
118618778 VPS4B; vacuolar protein sorting-associated protein 4B isoform X1 [KO:K12196 ]
118639229 VPS4A; vacuolar protein sorting-associated protein 4A isoform X1 [KO:K12196 ]
118621184 VTA1; vacuolar protein sorting-associated protein VTA1 homolog isoform X1 [KO:K12199 ]
118631369 LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein VTA1 homolog [KO:K12199 ]
118633030 programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
118620944 IGF2R; cation-independent mannose-6-phosphate receptor isoform X1 [KO:K06564 ]
118624074 IL2RB; interleukin-2 receptor subunit beta isoform X1 [KO:K05069 ]
118621148 class I histocompatibility antigen, Gogo-B*0103 alpha chain-like isoform X1 [KO:K06751 ]
118621233 saoe class I histocompatibility antigen, A alpha chain-like [KO:K06751 ]
118639188 patr class I histocompatibility antigen, A-126 alpha chain-like [KO:K06751 ]
118639189 patr class I histocompatibility antigen, A-126 alpha chain-like isoform X1 [KO:K06751 ]
118633879 RABEP1; rab GTPase-binding effector protein 1 isoform X1 [KO:K12480 ]
118632592 RUFY2; RUN and FYVE domain-containing protein 2 isoform X1 [KO:K12482 ]
118638001 VPS45; vacuolar protein sorting-associated protein 45 isoform X1 [KO:K12479 ]
118622505 RAB11FIP1; rab11 family-interacting protein 1 isoform X1 [KO:K12484 ]
118630766 RAB11FIP5; rab11 family-interacting protein 5 isoform X1 [KO:K12484 ]
118632442 RAB11FIP2; rab11 family-interacting protein 2 isoform X1 [KO:K12484 ]
118638707 PARD6A; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
118638912 LOW QUALITY PROTEIN: cell division control protein 42 homolog [KO:K04393 ]
118627143 SMAP2; stromal membrane-associated protein 2 isoform X1 [KO:K12486 ]
118620941 SMAP1; stromal membrane-associated protein 1 isoform X1 [KO:K12486 ]
118626341 ASAP3; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 [KO:K12488 ]
118630748 ASAP2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
118631397 ASAP1; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12488 ]
118617411 ACAP2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12489 ]
118634491 ACAP1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12489 ]
118643412 ACAP3; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12489 ]
118628024 ARAP1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
118618782 ARAP2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K18440 ]
118615668 ARAP3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 [KO:K12490 ]
118625477 AGAP1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12491 ]
118620109 AGAP3; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
118623857 AGAP2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
118618901 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [KO:K12492 ]
118627651 ARFGAP2; ADP-ribosylation factor GTPase-activating protein 2 [KO:K12493 ]
118624497 ARFGAP3; ADP-ribosylation factor GTPase-activating protein 3 isoform X1 [KO:K12493 ]
118622270 PSD3; PH and SEC7 domain-containing protein 3 isoform X1 [KO:K12494 ]
118630640 PSD4; PH and SEC7 domain-containing protein 4 isoform X1 [KO:K12494 ]
118632004 PSD; PH and SEC7 domain-containing protein 1 isoform X1 [KO:K12494 ]
118635953 IQSEC2; IQ motif and SEC7 domain-containing protein 2 isoform X1 [KO:K12495 ]
118624499 IQSEC3; IQ motif and SEC7 domain-containing protein 3 isoform X1 [KO:K12495 ]
118617055 IQSEC1; IQ motif and SEC7 domain-containing protein 1 isoform X1 [KO:K12495 ]
118618216 ARFGEF2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 [KO:K18442 ]
118631781 ARFGEF1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
118632540 GBF1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [KO:K18443 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
mmf04060 Cytokine-cytokine receptor interaction
mmf04070 Phosphatidylinositol signaling system
mmf04130 SNARE interactions in vesicular transport
KO pathway
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