KEGG   PATHWAY: osa04146
Entry
osa04146                    Pathway                                
Name
Peroxisome - Oryza sativa japonica (Japanese rice)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
osa04146  Peroxisome
osa04146

Other DBs
GO: 0005777
Organism
Oryza sativa japonica (Japanese rice) [GN:osa]
Gene
107276049  [KO:K13347]
107276062  [KO:K00306] [EC:1.5.3.1 1.5.3.7]
107276319  [KO:K13356] [EC:1.2.1.84]
107278422  [KO:K13356] [EC:1.2.1.84]
129493522  [KO:K13237] [EC:1.3.1.124]
4324062  [KO:K00232] [EC:1.3.3.6]
4324176  [KO:K00031] [EC:1.1.1.42]
4324180  [KO:K01897] [EC:6.2.1.3]
4324393  [KO:K01897] [EC:6.2.1.3]
4324427  [KO:K13348]
4324471  [KO:K25819]
4324491  2-HPCL; 2-hydroxyacyl-CoA lyase [KO:K12261] [EC:4.1.2.63]
4326266  [KO:K01640] [EC:4.1.3.4]
4327186  [KO:K13348]
4327213  [KO:K00031] [EC:1.1.1.42]
4327232  [KO:K12663] [EC:5.3.3.21]
4327296  [KO:K00306] [EC:1.5.3.1 1.5.3.7]
4328073  CAT-A; catalase isozyme A [KO:K03781] [EC:1.11.1.6]
4328136  [KO:K13335]
4328774  [KO:K13354]
4328779  [KO:K13347]
4328861  [KO:K13341]
4330220  [KO:K13337]
4331150  [KO:K07513] [EC:2.3.1.16]
4331509  [KO:K03781] [EC:1.11.1.6]
4331746  [KO:K13356] [EC:1.2.1.84]
4332082  [KO:K04565] [EC:1.15.1.1]
4332347  [KO:K13354]
4332846  SODCC.1; superoxide dismutase [Cu-Zn] 1 isoform X1 [KO:K04565] [EC:1.15.1.1]
4333171  OsJ_11360; xanthine dehydrogenase isoform 1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
4333336  [KO:K13348]
4333863  OsJ_12289; phytanoyl-CoA dioxygenase 1 [KO:K00477] [EC:1.14.11.18]
4334349  GLO1; glycolate oxidase 1 [KO:K11517] [EC:1.1.3.15]
4334764  [KO:K01897] [EC:6.2.1.3]
4335559  [KO:K13356] [EC:1.2.1.84]
4335562  [KO:K13356] [EC:1.2.1.84]
4336353  [KO:K00031] [EC:1.1.1.42]
4337006  [KO:K13339]
4337048  GLO3; glycolate oxidase 3 isoform 1 [KO:K11517] [EC:1.1.3.15]
4337525  [KO:K13343]
4337574  [KO:K25819]
4337714  [KO:K01897] [EC:6.2.1.3]
4337904  [KO:K00232] [EC:1.3.3.6]
4338276  [KO:K06664]
4338395  [KO:K01897] [EC:6.2.1.3]
4338417  OsJ_18067; superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
4338691  [KO:K13354]
4339087  OsJ_18897; phytanoyl-CoA dioxygenase 2 isoform X1 [KO:K00477] [EC:1.14.11.18]
4339674  [KO:K00031] [EC:1.1.1.42]
4339846  [KO:K00232] [EC:1.3.3.6]
4339922  OsJ_19901; superoxide dismutase [Fe] 1, chloroplastic [KO:K04564] [EC:1.15.1.1]
4340074  [KO:K03426] [EC:3.6.1.22]
4340091  [KO:K04564] [EC:1.15.1.1]
4340187  [KO:K01897] [EC:6.2.1.3]
4340972  [KO:K00232] [EC:1.3.3.6]
4340976  [KO:K00232] [EC:1.3.3.6]
4340986  [KO:K00232] [EC:1.3.3.6]
4342124  CAT-B; catalase isozyme B [KO:K03781] [EC:1.11.1.6]
4342419  [KO:K13344]
4342420  GLO5; glycolate oxidase 5 [KO:K11517] [EC:1.1.3.15]
4343871  [KO:K13346]
4343872  [KO:K13346]
4343908  GLO4; peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [KO:K11517] [EC:1.1.3.15]
4344210  SODCC.2; superoxide dismutase [Cu-Zn] 2 [KO:K04565] [EC:1.15.1.1]
4345945  [KO:K13342]
4345962  [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
4346288  [KO:K13338]
4346301  [KO:K13356] [EC:1.2.1.84]
4346329  P0543D10.3; superoxide dismutase [Cu-Zn], chloroplastic [KO:K04565] [EC:1.15.1.1]
4346360  [KO:K13347]
4346459  [KO:K11147] [EC:1.1.-.-]
4346691  [KO:K13336]
4346967  [KO:K01578] [EC:4.1.1.9]
4347528  [KO:K13354]
4347887  [KO:K13356] [EC:1.2.1.84]
4348331  [KO:K00869] [EC:2.7.1.36]
4348804  [KO:K07513] [EC:2.3.1.16]
4348849  [KO:K13345]
4349678  [KO:K13347]
4349718  [KO:K01640] [EC:4.1.3.4]
4349764  [KO:K01897] [EC:6.2.1.3]
4349889  [KO:K01897] [EC:6.2.1.3]
4350728  [KO:K01897] [EC:6.2.1.3]
4350881  [KO:K00232] [EC:1.3.3.6]
4351434  [KO:K01640] [EC:4.1.3.4]
4351483  [KO:K01897] [EC:6.2.1.3]
4351610  [KO:K01897] [EC:6.2.1.3]
4352306  [KO:K13348]
4352447  [KO:K00306] [EC:1.5.3.1 1.5.3.7]
9267826  [KO:K13356] [EC:1.2.1.84]
9268894  [KO:K13343]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
osa00071  Fatty acid degradation
osa00230  Purine metabolism
osa00564  Glycerophospholipid metabolism
osa00565  Ether lipid metabolism
osa00900  Terpenoid backbone biosynthesis
KO pathway
ko04146   

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