KEGG   PATHWAY: psiu04512
Entry
psiu04512                   Pathway                                
Name
ECM-receptor interaction - Phocoena sinus (vaquita)
Description
The extracellular matrix (ECM) consists of a complex mixture of structural and functional macromolecules and serves an important role in tissue and organ morphogenesis and in the maintenance of cell and tissue structure and function. Specific interactions between cells and the ECM are mediated by transmembrane molecules, mainly integrins and perhaps also proteoglycans, CD36, or other cell-surface-associated components. These interactions lead to a direct or indirect control of cellular activities such as adhesion, migration, differentiation, proliferation, and apoptosis. In addition, integrins function as mechanoreceptors and provide a force-transmitting physical link between the ECM and the cytoskeleton. Integrins are a family of glycosylated, heterodimeric transmembrane adhesion receptors that consist of noncovalently bound alpha- and beta-subunits.
Class
Environmental Information Processing; Signaling molecules and interaction
Pathway map
psiu04512  ECM-receptor interaction
psiu04512

Other DBs
GO: 0005201
Organism
Phocoena sinus (vaquita) [GN:psiu]
Gene
116759245  COL1A2; collagen alpha-2(I) chain isoform X1 [KO:K06236]
116745191  COL1A1; collagen alpha-1(I) chain isoform X1 [KO:K06236]
116760999  COL2A1; collagen alpha-1(II) chain [KO:K19719]
116747864  COL4A5; collagen alpha-5(IV) chain isoform X1 [KO:K06237]
116748067  COL4A6; collagen alpha-6(IV) chain isoform X1 [KO:K06237]
116756400  COL4A4; collagen alpha-4(IV) chain isoform X1 [KO:K06237]
116756805  COL4A3; collagen alpha-3(IV) chain [KO:K06237]
116743163  COL4A2; collagen alpha-2(IV) chain [KO:K06237]
116743164  COL4A1; collagen alpha-1(IV) chain [KO:K06237]
116753029  COL6A5; LOW QUALITY PROTEIN: collagen alpha-5(VI) chain [KO:K06238]
116753030  COL6A6; collagen alpha-6(VI) chain [KO:K06238]
116753075  COL6A1; collagen alpha-1(VI) chain [KO:K06238]
116756922  COL6A3; collagen alpha-3(VI) chain isoform X1 [KO:K06238]
116752834  COL6A2; LOW QUALITY PROTEIN: collagen alpha-2(VI) chain [KO:K06238]
116743487  COL9A2; collagen alpha-2(IX) chain [KO:K08131]
116739831  COL9A3; collagen alpha-3(IX) chain [KO:K08131]
116763458  COL9A1; collagen alpha-1(IX) chain isoform X1 [KO:K08131]
116763252  LAMA2; LOW QUALITY PROTEIN: laminin subunit alpha-2 [KO:K05637]
116765008  LAMA1; laminin subunit alpha-1 [KO:K05637]
116739717  LAMA5; laminin subunit alpha-5 isoform X1 [KO:K06240]
116765156  LAMA3; LOW QUALITY PROTEIN: laminin subunit alpha-3 [KO:K06240]
116763363  LAMA4; laminin subunit alpha-4 isoform X1 [KO:K06241]
116759601  LAMB1; laminin subunit beta-1 isoform X1 [KO:K05636]
116761805  LAMB2; laminin subunit beta-2 isoform X1 [KO:K06243]
116741523  LAMB3; laminin subunit beta-3 isoform X1 [KO:K06244]
116750559  LAMC1; laminin subunit gamma-1 isoform X1 [KO:K05635]
116756094  LAMC2; laminin subunit gamma-2 isoform X1 [KO:K06246]
116756082  LAMC3; laminin subunit gamma-3 [KO:K06247]
116745178  CHAD; chondroadherin [KO:K06248]
116759789  RELN; reelin isoform X1 [KO:K06249] [EC:3.4.21.-]
116748587  THBS1; LOW QUALITY PROTEIN: thrombospondin-1 [KO:K16857]
116749562  THBS3; thrombospondin-3 isoform X1 [KO:K04659]
116763676  THBS2; thrombospondin-2 isoform X1 [KO:K04659]
116751864  COMP; cartilage oligomeric matrix protein [KO:K04659]
116752206  THBS4; thrombospondin-4 [KO:K04659]
116756945  FN1; fibronectin isoform X1 [KO:K05717]
116754469  SPP1; osteopontin [KO:K06250]
116745287  VTN; vitronectin [KO:K06251]
116760986  TNR; tenascin-R [KO:K06252]
116755484  TNC; tenascin isoform X1 [KO:K06252]
116762928  TNXB; tenascin-X isoform X1 [KO:K06252]
116764929  TNN; tenascin-N [KO:K06252]
116754760  NPNT; nephronectin isoform X1 [KO:K06824]
116754349  FRAS1; extracellular matrix protein FRAS1 isoform X1 [KO:K23379]
116755921  FREM1; FRAS1-related extracellular matrix protein 1 isoform X1 [KO:K23380]
116743198  FREM2; FRAS1-related extracellular matrix protein 2 [KO:K23380]
116753833  DSPP; dentin sialophosphoprotein [KO:K23573]
116760832  VWF; von Willebrand factor isoform X1 [KO:K03900]
116754579  IBSP; bone sialoprotein 2 [KO:K06253]
116754605  DMP1; dentin matrix acidic phosphoprotein 1 isoform X1 [KO:K23328]
116754442  MEPE; matrix extracellular phosphoglycoprotein isoform X1 [KO:K26442]
116761348  AGRN; agrin isoform X1 [KO:K06254]
116744715  HSPG2; basement membrane-specific heparan sulfate proteoglycan core protein isoform X1 [KO:K06255]
116750743  ITGA1; integrin alpha-1 isoform X1 [KO:K06480]
116750842  ITGA2; integrin alpha-2 [KO:K06481]
116746301  ITGA2B; integrin alpha-IIb isoform X1 [KO:K06476]
116745368  ITGA3; integrin alpha-3 isoform X1 [KO:K06482]
116756296  ITGA4; integrin alpha-4 isoform X1 [KO:K06483]
116760042  ITGA5; integrin alpha-5 isoform X1 [KO:K06484]
116756709  ITGA6; integrin alpha-6 isoform X1 [KO:K06485]
116760594  ITGA7; integrin alpha-7 isoform X1 [KO:K06583]
116749001  ITGA8; integrin alpha-8 isoform X1 [KO:K06584]
116762719  ITGA9; integrin alpha-9 [KO:K06585]
116745510  ITGA10; integrin alpha-10 [KO:K06586]
116748382  ITGA11; LOW QUALITY PROTEIN: integrin alpha-11 [KO:K06587]
116757071  ITGAV; integrin alpha-V isoform X1 [KO:K06487]
116748884  ITGB1; integrin beta-1 isoform X1 [KO:K05719]
116746035  ITGB3; integrin beta-3 [KO:K06493]
116746323  ITGB4; integrin beta-4 isoform X1 [KO:K06525]
116752555  ITGB5; integrin beta-5 isoform X1 [KO:K06588]
116757047  ITGB6; integrin beta-6 isoform X1 [KO:K06589]
116760356  ITGB7; integrin beta-7 [KO:K06590]
116759316  ITGB8; integrin beta-8 isoform X1 [KO:K06591]
116757557  CD44; CD44 antigen isoform X1 [KO:K06256]
116764682  SDC1; syndecan-1 [KO:K06257]
116740404  SDC4; LOW QUALITY PROTEIN: syndecan-4 [KO:K16338]
116749277  SV2B; synaptic vesicle glycoprotein 2B isoform X1 [KO:K06258]
116751246  SV2C; synaptic vesicle glycoprotein 2C isoform X1 [KO:K06258]
116742641  SV2A; synaptic vesicle glycoprotein 2A isoform X1 [KO:K06258]
116759325  platelet glycoprotein 4-like isoform X1 [KO:K06259]
116759529  platelet glycoprotein 4 [KO:K06259]
116753318  GP5; platelet glycoprotein V [KO:K06260]
116746316  GP1BA; platelet glycoprotein Ib alpha chain [KO:K06261]
116738864  GP1BB; platelet glycoprotein Ib beta chain [KO:K06262]
116761921  GP9; platelet glycoprotein IX isoform X1 [KO:K06263]
116743815  GP6; platelet glycoprotein VI isoform X1 [KO:K06264]
116762000  DAG1; dystroglycan [KO:K06265]
116752792  CD47; leukocyte surface antigen CD47 isoform X1 [KO:K06266]
116751293  HMMR; hyaluronan mediated motility receptor isoform X1 [KO:K06267]
Compound
G10505  Hyaluronic acid
Reference
  Authors
van der Flier A, Sonnenberg A.
  Title
Function and interactions of integrins.
  Journal
Cell Tissue Res 305:285-98 (2001)
DOI:10.1007/s004410100417
Reference
  Authors
Reddy KV, Mangale SS.
  Title
Integrin receptors: the dynamic modulators of endometrial function.
  Journal
Tissue Cell 35:260-73 (2003)
DOI:10.1016/S0040-8166(03)00039-9
Reference
  Authors
Milner R, Campbell IL.
  Title
The integrin family of cell adhesion molecules has multiple functions within the CNS.
  Journal
J Neurosci Res 69:286-91 (2002)
DOI:10.1002/jnr.10321
Reference
  Authors
Cichy J, Pure E.
  Title
The liberation of CD44.
  Journal
J Cell Biol 161:839-43 (2003)
DOI:10.1083/jcb.200302098
Reference
PMID:7698997
  Authors
Elenius K, Jalkanen M.
  Title
Function of the syndecans--a family of cell surface proteoglycans.
  Journal
J Cell Sci 107 ( Pt 11):2975-82 (1994)
Reference
  Authors
Son YJ, Scranton TW, Sunderland WJ, Baek SJ, Miner JH, Sanes JR, Carlson SS.
  Title
The synaptic vesicle protein SV2 is complexed with an alpha5-containing laminin on the nerve terminal surface.
  Journal
J Biol Chem 275:451-60 (2000)
DOI:10.1074/jbc.275.1.451
Reference
  Authors
Sid B, Sartelet H, Bellon G, El Btaouri H, Rath G, Delorme N, Haye B, Martiny L.
  Title
Thrombospondin 1: a multifunctional protein implicated in the regulation of tumor growth.
  Journal
Crit Rev Oncol Hematol 49:245-58 (2004)
DOI:10.1016/j.critrevonc.2003.09.009
Reference
  Authors
Canobbio I, Balduini C, Torti M.
  Title
Signalling through the platelet glycoprotein Ib-V-IX complex.
  Journal
Cell Signal 16:1329-44 (2004)
DOI:10.1016/j.cellsig.2004.05.008
Reference
  Authors
Nieswandt B, Brakebusch C, Bergmeier W, Schulte V, Bouvard D, Mokhtari-Nejad R, Lindhout T, Heemskerk JW, Zirngibl H, Fassler R.
  Title
Glycoprotein VI but not alpha2beta1 integrin is essential for platelet interaction with collagen.
  Journal
EMBO J 20:2120-30 (2001)
DOI:10.1093/emboj/20.9.2120
Reference
  Authors
Martin PT.
  Title
Dystroglycan glycosylation and its role in matrix binding in skeletal muscle.
  Journal
Glycobiology 13:55R-66R (2003)
DOI:10.1093/glycob/cwg076
Reference
  Authors
Toole BP.
  Title
Hyaluronan: from extracellular glue to pericellular cue.
  Journal
Nat Rev Cancer 4:528-39 (2004)
DOI:10.1038/nrc1391
Reference
  Authors
Bosman FT, Stamenkovic I.
  Title
Functional structure and composition of the extracellular matrix.
  Journal
J Pathol 200:423-8 (2003)
DOI:10.1002/path.1437
Reference
  Authors
van der Ven AT, Vivante A, Hildebrandt F
  Title
Novel Insights into the Pathogenesis of Monogenic Congenital Anomalies of the Kidney and Urinary Tract.
  Journal
J Am Soc Nephrol 29:36-50 (2018)
DOI:10.1681/ASN.2017050561
Related
pathway
psiu04510  Focal adhesion
KO pathway
ko04512   
LinkDB

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