GFIT result for
cohn
|
GFIT result for
cohn
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| cohn:KCTCHS21_40110 (283 a.a.) |
-- |
ligB; SPBc2 prophage-derived DNA ligase-like protein LigB | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > cchl:FPL14_27395(283) | 283 | 63.3 | 1292 | 1 | -- | ATP-dependent DNA ligase | |||
| > cheb:HH215_34750(284) | 283 | 64.3 | 1252 | 1 | <- | ATP-dependent DNA ligase | |||
| > pcel:HUB94_00285(282) | 283 | 52.7 | 1049 | 1 | -- | ATP-dependent DNA ligase | |||
| > pib:BBD41_03215(288) | 286 | 48.3 | 936 | 3 | -- | ATP-dependent DNA ligase | |||
| > paun:MJA45_18315(?) | 281 | 49.8 | 927 | 0 | -- | - | |||
| > psab:PSAB_20545(289) | 291 | 49.8 | 914 | 2 | -- | ligB; ATP-dependent DNA ligase | |||
| > ppo:PPM_2737(286) | 288 | 47.6 | 895 | 3 | -- | ligB3; ATP-dependent DNA ligase | |||
| > pjd:Pjdr2_1127(287) | 281 | 44.8 | 889 | 1 | -- | ATP dependent DNA ligase | |||
| > ppab:KET34_10625(?) | 288 | 45.1 | 883 | 0 | -- | - | |||
| > plen:EIM92_01115(287) | 288 | 46.5 | 879 | 1 | -- | ATP-dependent DNA ligase | |||
| > pmq:PM3016_2376(284) | 286 | 47.2 | 879 | 3 | -- | ATP dependent DNA ligase | |||
| > pmw:B2K_12050(284) | 286 | 47.2 | 879 | 3 | -- | ATP-dependent DNA ligase | |||
| > pspn:L1F29_24585(?) | 283 | 44.9 | 878 | 0 | -- | - | |||
| > pms:KNP414_02090(284) | 286 | 47.2 | 874 | 3 | -- | ATP dependent DNA ligase | |||
| > gym:GYMC10_0669(288) | 292 | 47.6 | 859 | 1 | -- | ATP dependent DNA ligase | |||
| > pnp:IJ22_10880(287) | 285 | 44.9 | 857 | 1 | -- | ATP-dependent DNA ligase | |||
| > ptri:KDC22_14590(287) | 290 | 44.1 | 841 | 1 | -- | ATP-dependent DNA ligase | |||
| > pgm:PGRAT_14595(287) | 290 | 43.8 | 839 | 1 | -- | ATP-dependent DNA ligase | |||
| > paen:P40081_15495(287) | 289 | 44.6 | 837 | 2 | -- | ATP-dependent DNA ligase | |||
| > pdh:B9T62_15530(287) | 290 | 42.8 | 830 | 2 | -- | ATP-dependent DNA ligase | |||
| > pson:JI735_01345(291) | 291 | 42.6 | 805 | 2 | -- | ATP-dependent DNA ligase | |||
| > pui:PUW25_27360(287) | 287 | 42.5 | 784 | 1 | -- | RNA ligase family protein | |||
| > pprt:ET464_05550(290) | 282 | 41.1 | 706 | 0 | <- | hypothetical protein | |||
| > bon:A361_10965(271) | 285 | 39.3 | 661 | 2 | -- | ATP-dependent DNA ligase | |||
| > hamy:MUO15_20960(?) | 287 | 38.7 | 642 | 0 | -- | - | |||
| > gaj:MY490_01485(283) | 288 | 36.5 | 607 | 1 | -- | hypothetical protein | |||
| > pchi:PC41400_14640(272) | 282 | 38.3 | 606 | 2 | -- | DNA ligase | |||
| > ndt:L1999_02135(273) | 288 | 36.1 | 603 | 2 | -- | ATP-dependent DNA ligase | |||
| > ncm:QNK12_06440(274) | 289 | 37.7 | 602 | 0 | -- | ATP-dependent DNA ligase | |||
| > bcl:ABC2809(277) | 285 | 35.1 | 598 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > ppm:PPSC2_28365(288) | 285 | 36.5 | 595 | 1 | -- | hypothetical protein | |||
| > csoa:LIS82_07425(273) | 285 | 37.9 | 594 | 2 | -- | ATP-dependent DNA ligase | |||
| > cpss:M5V91_29800(?) | 287 | 36.9 | 589 | 0 | -- | - | |||
| > prz:GZH47_32380(273) | 288 | 38.5 | 582 | 1 | -- | DNA ligase | |||
| > acit:HPK19_19530(283) | 288 | 34.7 | 581 | 1 | -- | ATP-dependent DNA ligase | |||
| > pbac:HUB98_05725(270) | 271 | 37.3 | 580 | 1 | -- | hypothetical protein | |||
| > psua:FLK61_00230(270) | 284 | 36.6 | 579 | 0 | -- | ATP-dependent DNA ligase | |||
| > bao:BAMF_0926(270) | 280 | 37.1 | 563 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
| > bson:S101395_02792(270) | 280 | 36.4 | 548 | 1 | -- | ligD; DNA ligase (ATP) | |||
| > pthi:NDS46_31860(289) | 287 | 36.2 | 546 | 1 | -- | DNA polymerase LigD | |||
| > bteq:G4P54_09600(270) | 280 | 36.4 | 543 | 1 | -- | ATP-dependent DNA ligase | |||
| > bacs:AUL54_20235(270) | 280 | 36.1 | 540 | 1 | -- | ATP-dependent DNA ligase | |||
| > baz:BAMTA208_06575(270) | 280 | 36.1 | 540 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bql:LL3_02285(270) | 280 | 36.1 | 540 | 1 | -- | ligB; SPBc2 prophage-derived DNA ligase-like protein ligB | |||
| > bxh:BAXH7_01346(270) | 280 | 36.1 | 540 | 1 | -- | yoqV; hypothetical protein | |||
| > bamy:V529_20630(270) | 280 | 36.1 | 539 | 2 | -- | ligB; ATP-dependent DNA ligase | |||
| > bgy:BGLY_2023(270) | 280 | 36.1 | 539 | 1 | -- | ATP-dependent DNA ligase | |||
| > dai:Desaci_4757(289) | 287 | 37.3 | 539 | 1 | -- | ATP dependent DNA ligase-like protein | |||
| > psop:KP014_20345(275) | 287 | 34.8 | 539 | 1 | -- | DNA ligase | |||
| > bamb:BAPNAU_1647(270) | 280 | 36.4 | 536 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bama:RBAU_2060(270) | 280 | 35.7 | 532 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
| > bld:BLi01538(269) | 283 | 35.7 | 532 | 1 | -- | ligB; phage ATP-dependent DNA ligase LigB | |||
| > bli:BL00865(269) | 283 | 35.7 | 532 | 1 | -- | ligB; DNA ligase,phage related | |||
| > bacl:BS34A_22670(270) | 280 | 36.1 | 531 | 1 | -- | ligB; DNA ligase-like protein LigB | |||
| > bsh:BSU6051_20500(270) | 280 | 36.1 | 531 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase LigB | |||
| > bsq:B657_20500(270) | 280 | 36.1 | 531 | 1 | -- | ligB; Bacteriophage SPbeta DNA ligase | |||
| > bsu:BSU20500(270) | 280 | 36.1 | 531 | 1 | -- | ligB; DNA ligase-like protein LigB | |||
| > bsul:BSUA_02207(270) | 280 | 36.1 | 531 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bsut:BSUB_02207(270) | 280 | 36.1 | 531 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bya:BANAU_1788(270) | 280 | 36.1 | 531 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > vg:1261486(270) | 280 | 36.1 | 531 | 87 | -- | yoqV, SPBc2p117; Bacillus phage SPBc2; SPBc2 prophage-derived DNA ligase-like protein LigB | |||
| > rmf:D5E69_22740(281) | 286 | 36.7 | 528 | 0 | -- | ATP-dependent DNA ligase | |||
| > afas:NZD89_27935(280) | 281 | 34.5 | 527 | 5 | -- | hypothetical protein | |||
| > dfg:B0537_11885(280) | 279 | 36.6 | 527 | 0 | -- | hypothetical protein | |||
| > plw:D5F53_33225(292) | 289 | 32.2 | 522 | 1 | -- | hypothetical protein | |||
| > bsaf:BSL056_08940(270) | 280 | 34.6 | 520 | 1 | -- | ATP-dependent DNA ligase | |||
| > lfb:C1X05_12435(302) | 253 | 37.9 | 520 | 2 | -- | hypothetical protein | |||
| > bqy:MUS_2008(265) | 269 | 36.4 | 517 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bbe:BBR47_29440(153) | 141 | 52.5 | 512 | 1 | -- | hypothetical protein | |||
| > bpf:BpOF4_20089(222) | 227 | 38.3 | 488 | 0 | -- | ligB; ATP-dependent DNA ligase | |||
| > pvo:PVOR_28629(194) | 191 | 42.9 | 487 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > pkp:SK3146_00720(?) | 192 | 40.6 | 483 | 0 | -- | - | |||
| > salq:SYNTR_0294(313) | 288 | 33.0 | 463 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ifn:GM661_13815(291) | 299 | 32.4 | 449 | 0 | -- | hypothetical protein | |||
| > tum:CBW65_10305(351) | 289 | 31.8 | 449 | 1 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afw:Anae109_0939(847) | 296 | 33.1 | 444 | 78 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hals:D7D81_16705(291) | 300 | 33.0 | 443 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > adau:NZD86_09185(294) | 283 | 32.9 | 431 | 1 | -- | DNA ligase | |||
| > palb:EJC50_29255(305) | 289 | 31.5 | 427 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mpd:MCP_2126(334) | 291 | 30.6 | 416 | 1 | -- | putative ATP-dependent DNA ligase | |||
| > tid:Thein_1426(302) | 284 | 29.9 | 413 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bjp:RN69_20745(315) | 297 | 31.0 | 410 | 7 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bju:BJ6T_42720(315) | 297 | 31.0 | 410 | 9 | -- | hypothetical protein | |||
| > ahb:bsdtb5_21830(316) | 294 | 27.6 | 409 | 0 | -- | ATP-dependent DNA ligase | |||
| > aarg:Aargi30884_24150(309) | 291 | 30.2 | 408 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppeo:ABE82_26745(297) | 269 | 31.6 | 408 | 1 | -- | hypothetical protein | |||
| > bgw:VE98_C0001G0251(307) | 289 | 31.5 | 406 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase, DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bco:Bcell_3193(314) | 289 | 30.8 | 405 | 1 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppoy:RE92_25010(297) | 269 | 31.2 | 403 | 1 | -- | hypothetical protein | |||
| > aory:AMOR_35880(844) | 296 | 30.4 | 398 | 58 | -- | ATP-dependent DNA ligase | |||
| > pxl:BS614_10440(316) | 302 | 31.1 | 398 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > swo:Swol_1123(309) | 287 | 32.1 | 396 | 0 | -- | K01971 | ligD | DNA ligase, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lse:F1C12_01125(818) | 295 | 32.5 | 395 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aog:LH407_01905(?) | 302 | 33.1 | 394 | 0 | -- | - | |||
| > pamy:P9222_30915(316) | 302 | 31.5 | 394 | 0 | -- | RNA ligase family protein | |||
| > absi:A9CBEGH2_21710(309) | 289 | 29.1 | 393 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > leif:HF024_11835(820) | 292 | 31.5 | 393 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lcg:L3BBH23_14170(311) | 295 | 29.8 | 392 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gek:kuro4_16810(312) | 284 | 30.6 | 389 | 0 | -- | ATP-dependent DNA ligase | |||
| > tbo:Thebr_0487(307) | 281 | 28.8 | 389 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |