GFIT result for
pnp
|
GFIT result for
pnp
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| pnp:IJ22_10880 (287 a.a.) |
-- |
ATP-dependent DNA ligase | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > paun:MJA45_18315(?) | 279 | 53.8 | 1028 | 0 | -- | - | |||
| > pib:BBD41_03215(288) | 287 | 50.9 | 993 | 3 | -- | ATP-dependent DNA ligase | |||
| > ppo:PPM_2737(286) | 284 | 49.6 | 971 | 3 | -- | ligB3; ATP-dependent DNA ligase | |||
| > ppab:KET34_10625(?) | 284 | 48.6 | 959 | 0 | -- | - | |||
| > psab:PSAB_20545(289) | 287 | 49.5 | 949 | 2 | -- | ligB; ATP-dependent DNA ligase | |||
| > paen:P40081_15495(287) | 281 | 48.0 | 932 | 2 | -- | ATP-dependent DNA ligase | |||
| > plen:EIM92_01115(287) | 287 | 45.6 | 929 | 1 | -- | ATP-dependent DNA ligase | |||
| > pdh:B9T62_15530(287) | 286 | 46.5 | 919 | 2 | -- | ATP-dependent DNA ligase | |||
| > pms:KNP414_02090(284) | 284 | 47.9 | 912 | 3 | -- | ATP dependent DNA ligase | |||
| > pgm:PGRAT_14595(287) | 286 | 47.2 | 911 | 1 | -- | ATP-dependent DNA ligase | |||
| > pmq:PM3016_2376(284) | 284 | 47.5 | 910 | 3 | -- | ATP dependent DNA ligase | |||
| > pmw:B2K_12050(284) | 284 | 47.5 | 910 | 3 | -- | ATP-dependent DNA ligase | |||
| > gym:GYMC10_0669(288) | 281 | 47.7 | 909 | 1 | -- | ATP dependent DNA ligase | |||
| > ptri:KDC22_14590(287) | 286 | 45.5 | 904 | 1 | -- | ATP-dependent DNA ligase | |||
| > pcel:HUB94_00285(282) | 286 | 47.2 | 897 | 1 | -- | ATP-dependent DNA ligase | |||
| > cchl:FPL14_27395(283) | 285 | 44.9 | 868 | 1 | -- | ATP-dependent DNA ligase | |||
| > pson:JI735_01345(291) | 284 | 46.5 | 865 | 2 | -- | ATP-dependent DNA ligase | |||
| > cohn:KCTCHS21_40110(283) | 285 | 44.9 | 857 | 1 | -- | ligB; SPBc2 prophage-derived DNA ligase-like protein LigB | |||
| > pui:PUW25_27360(287) | 284 | 44.7 | 849 | 1 | -- | RNA ligase family protein | |||
| > cheb:HH215_34750(284) | 285 | 43.5 | 813 | 1 | -- | ATP-dependent DNA ligase | |||
| > pjd:Pjdr2_1127(287) | 283 | 41.3 | 778 | 1 | -- | ATP dependent DNA ligase | |||
| > pspn:L1F29_24585(?) | 285 | 40.4 | 772 | 0 | -- | - | |||
| > pkp:SK3146_00720(?) | 192 | 57.3 | 762 | 0 | -- | - | |||
| > hamy:MUO15_20960(?) | 283 | 36.0 | 680 | 0 | -- | - | |||
| > pprt:ET464_05550(290) | 281 | 39.1 | 635 | 0 | -- | hypothetical protein | |||
| > bon:A361_28375(282) | 289 | 36.7 | 626 | 2 | -- | hypothetical protein | |||
| > cpss:M5V91_29800(?) | 289 | 36.7 | 626 | 0 | -- | - | |||
| > csoa:LIS82_07425(273) | 284 | 37.3 | 618 | 2 | -- | ATP-dependent DNA ligase | |||
| > pthi:NDS46_31860(289) | 288 | 36.8 | 608 | 1 | -- | DNA polymerase LigD | |||
| > ncm:QNK12_06440(274) | 285 | 35.8 | 606 | 0 | -- | ATP-dependent DNA ligase | |||
| > gaj:MY490_01485(283) | 279 | 34.4 | 603 | 1 | -- | hypothetical protein | |||
| > acit:HPK19_19530(283) | 280 | 34.6 | 602 | 1 | -- | ATP-dependent DNA ligase | |||
| > bsaf:BSL056_08940(270) | 281 | 35.9 | 598 | 1 | -- | ATP-dependent DNA ligase | |||
| > baz:BAMTA208_06575(270) | 281 | 37.7 | 596 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bql:LL3_02285(270) | 281 | 37.7 | 596 | 1 | -- | ligB; SPBc2 prophage-derived DNA ligase-like protein ligB | |||
| > bxh:BAXH7_01346(270) | 281 | 37.7 | 596 | 1 | -- | yoqV; hypothetical protein | |||
| > bacs:AUL54_20235(270) | 281 | 37.4 | 591 | 1 | -- | ATP-dependent DNA ligase | |||
| > ndt:L1999_02135(273) | 287 | 36.6 | 588 | 2 | -- | ATP-dependent DNA ligase | |||
| > pchi:PC41400_14640(272) | 281 | 37.0 | 587 | 2 | -- | DNA ligase | |||
| > bamb:BAPNAU_1647(270) | 281 | 37.4 | 586 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bya:BANAU_1788(270) | 281 | 37.7 | 586 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bama:RBAU_2060(270) | 281 | 36.7 | 580 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
| > bson:S101395_02792(270) | 281 | 35.6 | 580 | 1 | -- | ligD; DNA ligase (ATP) | |||
| > bteq:G4P54_09600(270) | 281 | 35.9 | 575 | 1 | -- | ATP-dependent DNA ligase | |||
| > bao:BAMF_0926(270) | 281 | 36.7 | 574 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
| > ppm:PPSC2_28365(288) | 286 | 35.7 | 573 | 1 | -- | hypothetical protein | |||
| > bamy:V529_20630(270) | 281 | 36.3 | 572 | 2 | -- | ligB; ATP-dependent DNA ligase | |||
| > bacl:BS34A_22670(270) | 281 | 35.9 | 570 | 1 | -- | ligB; DNA ligase-like protein LigB | |||
| > bsh:BSU6051_20500(270) | 281 | 35.9 | 570 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase LigB | |||
| > bsq:B657_20500(270) | 281 | 35.9 | 570 | 1 | -- | ligB; Bacteriophage SPbeta DNA ligase | |||
| > bsu:BSU20500(270) | 281 | 35.9 | 570 | 1 | -- | ligB; DNA ligase-like protein LigB | |||
| > bsul:BSUA_02207(270) | 281 | 35.9 | 570 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bsut:BSUB_02207(270) | 281 | 35.9 | 570 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > vg:1261486(270) | 281 | 35.6 | 570 | 87 | -- | yoqV, SPBc2p117; Bacillus phage SPBc2; SPBc2 prophage-derived DNA ligase-like protein LigB | |||
| > lfb:C1X05_12435(302) | 247 | 38.1 | 566 | 2 | -- | hypothetical protein | |||
| > dfg:B0537_11885(280) | 279 | 37.3 | 560 | 0 | -- | hypothetical protein | |||
| > bgy:BGLY_2023(270) | 281 | 34.9 | 559 | 1 | -- | ATP-dependent DNA ligase | |||
| > bqy:MUS_2008(265) | 276 | 37.3 | 559 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > prz:GZH47_32380(273) | 281 | 34.2 | 559 | 1 | -- | DNA ligase | |||
| > bcl:ABC2809(277) | 283 | 34.6 | 552 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > psua:FLK61_00230(270) | 284 | 32.7 | 545 | 0 | -- | ATP-dependent DNA ligase | |||
| > rmf:D5E69_22740(281) | 282 | 36.2 | 542 | 0 | -- | ATP-dependent DNA ligase | |||
| > pvo:PVOR_28629(194) | 189 | 45.0 | 530 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > psop:KP014_20345(275) | 283 | 34.3 | 524 | 1 | -- | DNA ligase | |||
| > bld:BLi01538(269) | 286 | 35.3 | 521 | 1 | -- | ligB; phage ATP-dependent DNA ligase LigB | |||
| > bli:BL00865(269) | 286 | 35.3 | 521 | 1 | -- | ligB; DNA ligase,phage related | |||
| > hals:D7D81_16705(291) | 294 | 28.9 | 494 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ifn:GM661_13815(291) | 294 | 28.6 | 491 | 0 | -- | hypothetical protein | |||
| > pbac:HUB98_05725(270) | 284 | 33.5 | 490 | 1 | -- | hypothetical protein | |||
| > dai:Desaci_4757(289) | 282 | 34.8 | 482 | 1 | -- | ATP dependent DNA ligase-like protein | |||
| > plw:D5F53_33225(292) | 280 | 30.4 | 482 | 1 | -- | hypothetical protein | |||
| > tit:Thit_1868(307) | 295 | 31.5 | 481 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tmt:Tmath_1843(307) | 295 | 31.5 | 481 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tbo:Thebr_0487(307) | 296 | 31.4 | 480 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tpd:Teth39_0475(307) | 296 | 31.4 | 480 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tex:Teth514_0952(307) | 296 | 31.4 | 479 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > thx:Thet_1965(307) | 296 | 31.4 | 479 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > twi:Thewi_2144(307) | 295 | 31.5 | 478 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tki:TKV_c19040(307) | 295 | 31.5 | 476 | 0 | -- | K01971 | ligD | ligD; end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpf:BpOF4_20089(222) | 229 | 34.5 | 464 | 0 | -- | ligB; ATP-dependent DNA ligase | |||
| > lyb:C3943_17795(291) | 287 | 29.3 | 456 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aaut:ACETAC_00730(307) | 297 | 30.3 | 453 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > csd:Clst_1550(303) | 280 | 31.4 | 452 | 0 | -- | K01971 | ligD | ligD2; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > css:Cst_c16050(303) | 280 | 31.4 | 452 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afas:NZD89_20915(302) | 280 | 31.8 | 449 | 5 | -- | DNA ligase | |||
| > afw:Anae109_0939(847) | 301 | 30.2 | 447 | 78 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lys:LBYS11_16190(291) | 286 | 28.3 | 447 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ehn:H9Q80_17575(310) | 286 | 30.8 | 443 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > absi:A9CBEGH2_21710(309) | 287 | 32.8 | 441 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aarg:Aargi30884_24150(309) | 288 | 32.6 | 440 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kme:H0A61_01694(308) | 304 | 33.6 | 440 | 1 | -- | K01971 | ligD | ligD; Multifunctional non-homologous end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lagr:FJQ98_16255(292) | 287 | 28.6 | 439 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ciu:G4D55_10655(310) | 286 | 31.8 | 438 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > erb:A4V01_12235(310) | 286 | 31.1 | 436 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbaj:LRS13_17790(?) | 301 | 30.6 | 436 | 0 | -- | - | |||
| > aba:Acid345_0779(608) | 297 | 29.6 | 434 | 4 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aza:AZKH_2968(851) | 305 | 30.8 | 434 | 0 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dti:Desti_0132(536) | 301 | 28.9 | 433 | 0 | -- | DNA ligase D/DNA polymerase LigD | |||
| > dfo:Dform_00676(320) | 304 | 28.3 | 430 | 0 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hor:Hore_03420(285) | 291 | 29.6 | 430 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |