GFIT result for
bamb
|
GFIT result for
bamb
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| bamb:BAPNAU_1647 (270 a.a.) |
-- |
ligB; ATP-dependent DNA ligase | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > bya:BANAU_1788(270) | 270 | 97.0 | 1758 | 1 | <> | ligB; ATP-dependent DNA ligase | |||
| > baz:BAMTA208_06575(270) | 270 | 97.0 | 1753 | 1 | -> | ligB; ATP-dependent DNA ligase | |||
| > bql:LL3_02285(270) | 270 | 97.0 | 1753 | 1 | -> | ligB; SPBc2 prophage-derived DNA ligase-like protein ligB | |||
| > bxh:BAXH7_01346(270) | 270 | 97.0 | 1753 | 1 | -> | yoqV; hypothetical protein | |||
| > bacs:AUL54_20235(270) | 270 | 96.7 | 1744 | 1 | -> | ATP-dependent DNA ligase | |||
| > bqy:MUS_2008(265) | 265 | 97.0 | 1723 | 1 | -> | ligB; ATP-dependent DNA ligase | |||
| > bama:RBAU_2060(270) | 270 | 94.1 | 1722 | 1 | -> | ligB; bacteriophage SPbeta DNA ligase | |||
| > bteq:G4P54_09600(270) | 270 | 86.7 | 1616 | 1 | -> | ATP-dependent DNA ligase | |||
| > bacl:BS34A_22670(270) | 270 | 86.3 | 1601 | 1 | -> | ligB; DNA ligase-like protein LigB | |||
| > bsh:BSU6051_20500(270) | 270 | 86.3 | 1601 | 1 | -> | ligB; bacteriophage SPbeta DNA ligase LigB | |||
| > bsq:B657_20500(270) | 270 | 86.3 | 1601 | 1 | -> | ligB; Bacteriophage SPbeta DNA ligase | |||
| > bsu:BSU20500(270) | 270 | 86.3 | 1601 | 1 | -> | ligB; DNA ligase-like protein LigB | |||
| > bsul:BSUA_02207(270) | 270 | 86.3 | 1601 | 1 | -> | ligB; ATP-dependent DNA ligase | |||
| > bsut:BSUB_02207(270) | 270 | 86.3 | 1601 | 1 | -> | ligB; ATP-dependent DNA ligase | |||
| > vg:1261486(270) | 270 | 86.3 | 1601 | 87 | -- | yoqV, SPBc2p117; Bacillus phage SPBc2; SPBc2 prophage-derived DNA ligase-like protein LigB | |||
| > bamy:V529_20630(270) | 270 | 86.7 | 1600 | 2 | -> | ligB; ATP-dependent DNA ligase | |||
| > bsaf:BSL056_08940(270) | 269 | 81.4 | 1537 | 1 | -- | ATP-dependent DNA ligase | |||
| > psua:FLK61_00230(270) | 269 | 72.9 | 1384 | 0 | -- | ATP-dependent DNA ligase | |||
| > bgy:BGLY_2023(270) | 269 | 71.7 | 1344 | 1 | -- | ATP-dependent DNA ligase | |||
| > bson:S101395_02792(270) | 269 | 72.5 | 1342 | 1 | -- | ligD; DNA ligase (ATP) | |||
| > bao:BAMF_0926(270) | 269 | 62.5 | 1188 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
| > bld:BLi01538(269) | 269 | 61.3 | 1146 | 1 | -- | ligB; phage ATP-dependent DNA ligase LigB | |||
| > bli:BL00865(269) | 269 | 61.3 | 1146 | 1 | -- | ligB; DNA ligase,phage related | |||
| > csoa:LIS82_07425(273) | 273 | 55.7 | 997 | 2 | -- | ATP-dependent DNA ligase | |||
| > biq:AN935_09895(177) | 180 | 79.4 | 969 | 1 | -- | ATP-dependent DNA ligase | |||
| > ncm:QNK12_06440(274) | 272 | 50.7 | 930 | 0 | -- | ATP-dependent DNA ligase | |||
| > hamy:MUO15_20960(?) | 271 | 52.0 | 928 | 0 | -- | - | |||
| > bon:A361_28375(282) | 277 | 51.3 | 893 | 2 | -- | hypothetical protein | |||
| > cpss:M5V91_29800(?) | 277 | 51.3 | 893 | 0 | -- | - | |||
| > ndt:L1999_02135(273) | 275 | 50.9 | 880 | 2 | -- | ATP-dependent DNA ligase | |||
| > pbac:HUB98_05725(270) | 272 | 47.4 | 796 | 1 | -- | hypothetical protein | |||
| > psop:KP014_20345(275) | 277 | 46.6 | 775 | 1 | -- | DNA ligase | |||
| > bcl:ABC2809(277) | 275 | 43.6 | 750 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > ppo:PPM_2737(286) | 282 | 41.8 | 654 | 3 | -- | ligB3; ATP-dependent DNA ligase | |||
| > pdh:B9T62_15530(287) | 283 | 39.9 | 645 | 2 | -- | ATP-dependent DNA ligase | |||
| > pchi:PC41400_14640(272) | 268 | 42.5 | 637 | 2 | -- | DNA ligase | |||
| > paen:P40081_15495(287) | 287 | 39.0 | 630 | 2 | -- | ATP-dependent DNA ligase | |||
| > pcel:HUB94_00285(282) | 279 | 39.4 | 628 | 1 | -- | ATP-dependent DNA ligase | |||
| > gym:GYMC10_0669(288) | 284 | 39.8 | 623 | 1 | -- | ATP dependent DNA ligase | |||
| > ptri:KDC22_14590(287) | 285 | 37.9 | 622 | 1 | -> | ATP-dependent DNA ligase | |||
| > pgm:PGRAT_14595(287) | 284 | 38.7 | 615 | 1 | -- | ATP-dependent DNA ligase | |||
| > psab:PSAB_20545(289) | 285 | 40.4 | 611 | 2 | -- | ligB; ATP-dependent DNA ligase | |||
| > pui:PUW25_27360(287) | 282 | 38.7 | 605 | 1 | -- | RNA ligase family protein | |||
| > dai:Desaci_4757(289) | 281 | 39.1 | 601 | 1 | -- | ATP dependent DNA ligase-like protein | |||
| > pson:JI735_01345(291) | 291 | 37.5 | 595 | 2 | -- | ATP-dependent DNA ligase | |||
| > prz:GZH47_32380(273) | 270 | 39.3 | 594 | 1 | -- | DNA ligase | |||
| > pib:BBD41_03215(288) | 282 | 38.7 | 593 | 3 | -- | ATP-dependent DNA ligase | |||
| > pjd:Pjdr2_1127(287) | 280 | 36.4 | 593 | 1 | -- | ATP dependent DNA ligase | |||
| > cchl:FPL14_27395(283) | 280 | 38.6 | 590 | 1 | -- | ATP-dependent DNA ligase | |||
| > plen:EIM92_01115(287) | 283 | 37.5 | 589 | 1 | -- | ATP-dependent DNA ligase | |||
| > ppab:KET34_10625(?) | 282 | 36.2 | 588 | 0 | -- | - | |||
| > pnp:IJ22_10880(287) | 281 | 37.4 | 586 | 1 | -- | ATP-dependent DNA ligase | |||
| > bpf:BpOF4_20089(222) | 216 | 43.5 | 579 | 0 | -- | ligB; ATP-dependent DNA ligase | |||
| > pms:KNP414_02090(284) | 281 | 37.7 | 575 | 3 | -- | ATP dependent DNA ligase | |||
| > pmq:PM3016_2376(284) | 281 | 37.7 | 573 | 3 | -- | ATP dependent DNA ligase | |||
| > pmw:B2K_12050(284) | 281 | 37.7 | 573 | 3 | -- | ATP-dependent DNA ligase | |||
| > cheb:HH215_34750(284) | 279 | 38.4 | 570 | 1 | -- | ATP-dependent DNA ligase | |||
| > pspn:L1F29_24585(?) | 281 | 35.6 | 567 | 0 | -- | - | |||
| > paun:MJA45_18315(?) | 277 | 39.0 | 565 | 0 | -- | - | |||
| > plw:D5F53_33225(292) | 279 | 35.1 | 560 | 1 | -- | hypothetical protein | |||
| > lfb:C1X05_12435(302) | 252 | 38.1 | 551 | 2 | -- | hypothetical protein | |||
| > cohn:KCTCHS21_40110(283) | 280 | 36.4 | 536 | 1 | -- | ligB; SPBc2 prophage-derived DNA ligase-like protein LigB | |||
| > gaj:MY490_01485(283) | 286 | 33.9 | 534 | 1 | -- | hypothetical protein | |||
| > acit:HPK19_19530(283) | 285 | 34.0 | 529 | 1 | -- | ATP-dependent DNA ligase | |||
| > rmf:D5E69_22740(281) | 277 | 37.5 | 508 | 0 | -- | ATP-dependent DNA ligase | |||
| > bkw:BkAM31D_12620(242) | 194 | 41.2 | 501 | 1 | -- | Putative DNA ligase-like protein/MT0965 | |||
| > grs:C7S20_09415(822) | 292 | 33.6 | 498 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lyb:C3943_17795(291) | 285 | 34.7 | 495 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > zpr:ZPR_3654(811) | 292 | 31.8 | 494 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afla:FHG64_05770(821) | 291 | 31.6 | 485 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pthi:NDS46_31860(289) | 281 | 34.5 | 485 | 1 | -- | DNA polymerase LigD | |||
| > smis:LDL76_08210(818) | 291 | 32.3 | 479 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lys:LBYS11_16190(291) | 270 | 34.4 | 478 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > salt:AO058_01020(819) | 291 | 32.0 | 469 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > liu:OU989_23080(?) | 285 | 31.9 | 467 | 0 | -- | - | |||
| > lpak:GDS87_11990(292) | 284 | 33.8 | 466 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ifn:GM661_13815(291) | 278 | 31.3 | 463 | 0 | -- | hypothetical protein | |||
| > asl:Aeqsu_3115(807) | 293 | 32.4 | 458 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cmr:Cycma_1183(808) | 295 | 31.9 | 456 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gfo:GFO_0300(802) | 293 | 33.4 | 454 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dfg:B0537_11885(280) | 222 | 37.4 | 453 | 0 | -- | hypothetical protein | |||
| > grl:LPB144_07705(802) | 290 | 32.1 | 453 | 0 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fpb:NLJ00_16410(849) | 295 | 30.8 | 452 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hals:D7D81_16705(291) | 278 | 30.6 | 449 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gfl:GRFL_2087(804) | 291 | 32.0 | 448 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lagr:FJQ98_16255(292) | 284 | 33.8 | 448 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sahn:JRG66_00755(807) | 294 | 29.9 | 446 | 3 | -- | ligD; DNA ligase D | |||
| > cant:NCTC13489_00767(844) | 292 | 30.1 | 445 | 1 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > absi:A9CBEGH2_21710(309) | 292 | 30.5 | 439 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aarg:Aargi30884_24150(309) | 293 | 30.4 | 436 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppm:PPSC2_28365(288) | 279 | 34.1 | 436 | 1 | -- | hypothetical protein | |||
| > aev:EI546_13595(809) | 293 | 29.0 | 435 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cbae:COR50_04325(644) | 294 | 31.6 | 434 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > fec:QNH15_11745(159) | 149 | 45.0 | 434 | 0 | -- | RNA ligase family protein | |||
| > camu:CA2015_1090(810) | 295 | 31.5 | 433 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afas:NZD89_20915(302) | 287 | 32.1 | 432 | 5 | -- | DNA ligase | |||
| > anp:FK178_09475(818) | 292 | 29.1 | 432 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > csac:SIO70_22240(?) | 300 | 32.0 | 431 | 0 | -- | - | |||
| > psn:Pedsa_1057(822) | 294 | 31.0 | 431 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ofo:BRW83_1415(318) | 295 | 30.2 | 429 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |