GFIT result for T01335

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ppm:PPSC2_28365
(288 a.a.)
 
--
 
K10747  LIG1  [tr:E3ELD0_PAEPS] hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> ppo:PPM_p0233(296)29143.6843(232)2-- K10747  LIG1 ligB; DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> ppoy:RE92_25010(297)29343.3819(358)1-- K10747  LIG1 hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pdh:B9T62_15530(287)28941.2666(42)0-- K10747  LIG1 ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> paen:P40081_15495(287)28940.1644(314)2-- K10747  LIG1 ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pgm:PGRAT_14595(287)28940.1643(348)1-- K10747  LIG1  [tr:A0A089MB43_9BACL] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> psab:PSAB_20545(289)29037.9616(272)2-- K10747  LIG1  [tr:X4ZRA5_9BACL] ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bon:A361_10965(271)28539.3611(90)0-- K10747  LIG1  [tr:A0A160MA54_9BACI] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> gym:GYMC10_0669(288)28939.1604(307)1-- K10747  LIG1  [tr:D3ECS8_GEOS4] ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pnp:IJ22_10880(287)28635.7573(111)0-- K10747  LIG1  [tr:A0A0U2W7V3_9BACL] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pjd:Pjdr2_1127(287)28434.2561(278)1-- K10747  LIG1  [tr:C6CVU1_PAESJ] ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pms:KNP414_02090(284)28835.1519(146)3-- K10747  LIG1  [tr:F8FRU4_PAEMK] ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pmq:PM3016_2376(284)28835.4518(147)3-- K10747  LIG1  [tr:H6NKV8_9BACL] ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pmw:B2K_12050(284)28835.4518(147)3-- K10747  LIG1  [tr:I0BGE7_9BACL] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> tki:TKV_c19040(307)30333.3499()0-- K01971  ligD  [tr:A0A097ATC0_THEKI] ligD; end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbo:Thebr_0487(307)30333.3498()0-- K01971  ligD  [tr:E8UVF1_THEBF] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tex:Teth514_0952(307)30333.3498()0-- K01971  ligD  [tr:B0K5X7_THEPX] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> thx:Thet_1965(307)30333.3498()0-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tpd:Teth39_0475(307)30333.3498()0-- K01971  ligD  [tr:B0KD43_THEP3] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> twi:Thewi_2144(307)30333.0494()0-- K01971  ligD  [tr:G2MTV9_9THEO] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tit:Thit_1868(307)30433.2480()0-- K01971  ligD  [tr:D3T4F8_THEIA] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmt:Tmath_1843(307)30433.2480()0-- K01971  ligD  [tr:D7ARJ9_THEM3] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bco:Bcell_3193(314)30731.9474(53)1-- K01971  ligD  [tr:E6U0J0_BACCJ] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tto:Thethe_00683(307)30433.2461()0-- K01971  ligD  [tr:L0IHR9_THETR] ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bao:BAMF_0926(270)28034.3460(227)1-- K10747  LIG1  [tr:E1UPG9_BACAS] ligB; bacteriophage SPbeta DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> dfg:B0537_11885(280)29032.1456
0--     [tr:A0A1S6IY53_9FIRM] hypothetical protein
> ppeo:ABE82_01735(320)20937.8454()0-- K01971  ligD  [tr:A0A0K2F2V8_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bgy:BGLY_2023(270)27934.1453(213)0-- K10747  LIG1  [tr:A0A1C3SDA5_9BACI] ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bcl:ABC2809(277)29032.1452(244)1-- K10747  LIG1  [tr:Q5WE67_BACSK] ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> ppy:PPE_00335(320)20937.3450()0-- K01971  ligD  [tr:E0RC42_PAEP6] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppol:X809_01490(320)20936.8448()0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppq:PPSQR21_003370(320)20938.8448()0-- K01971  ligD cDC9; ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpf:BpOF4_20089(222)22933.6446(229)0-- K10747  LIG1  [tr:D3G0Z1_BACPE] ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> ttm:Tthe_0704(307)30432.6441()0-- K01971  ligD  [tr:D9TTK2_THETC] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> baz:BAMTA208_06575(270)27933.7440(207)1-- K10747  LIG1 ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bql:LL3_02285(270)27933.7440(207)1-- K10747  LIG1 ligB; SPBc2 prophage-derived DNA ligase-like protein ligB; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bxh:BAXH7_01346(270)27933.7440(207)1-- K10747  LIG1 yoqV; hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> dai:Desaci_4757(289)28731.7439(228)1-- K10747  LIG1  [tr:I4DCQ9_DESAJ] ATP dependent DNA ligase-like protein; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bamb:BAPNAU_1647(270)27934.1436(221)1-- K10747  LIG1 ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bbe:BBR47_36460(311)20934.0433(119)1-- K01971  ligD  [tr:C0ZFR4_BREBN] ligB; putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lsp:Bsph_p130(282)28830.2433(134)2-- K01971  ligD  [tr:B1I0K1_LYSSC] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bya:BANAU_1788(270)27933.0428(227)1-- K10747  LIG1 ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> txy:Thexy_0579(307)30430.9427()0-- K01971  ligD  [tr:F6BHW1_THEXL] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tsh:Tsac_1306(307)30431.6426()0-- K01971  ligD  [tr:I3VUX2_THESW] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bama:RBAU_2060(270)27932.6425(206)1-- K10747  LIG1  [tr:S6G209_9BACI] ligB; bacteriophage SPbeta DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> dec:DCF50_p2126(313)29128.9424()0-- K01971  ligD  [tr:K4L6R4_9FIRM] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ded:DHBDCA_p2112(313)29128.9424()0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ntr:B0W44_14255(311)30829.2423()0-- K01971  ligD  [tr:A0A1U9K9N4_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bamy:V529_20630(270)27933.0422(209)2-- K10747  LIG1 ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pih:UB51_23710(316)29730.0422()0-- K01971  ligD  [tr:A0A0D3VFK1_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bld:BLi01538(269)28232.3420(162)1-- K10747  LIG1 ligB; phage ATP-dependent DNA ligase LigB; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bli:BL00865(269)28232.3420(162)1-- K10747  LIG1  [tr:Q65KH5_BACLD] ligB; DNA ligase,phage related; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bqy:MUS_2008(265)27833.5418(217)1-- K10747  LIG1  [tr:I2C5Q1_BACAM] ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bacl:BS34A_22670(270)27932.6417(167)1-- K10747  LIG1 ligB; DNA ligase-like protein LigB; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bsh:BSU6051_20500(270)27932.6417(167)1-- K10747  LIG1 ligB; bacteriophage SPbeta DNA ligase LigB; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bsq:B657_20500(270)27932.6417(167)1-- K10747  LIG1 ligB; Bacteriophage SPbeta DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bsu:BSU20500(270)27932.6417(167)1-- K10747  LIG1  [sp:LIGB_BACSU] ligB; DNA ligase-like protein LigB; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bsul:BSUA_02207(270)27932.6417(167)1-- K10747  LIG1 ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> bsut:BSUB_02207(270)27932.6417(167)1-- K10747  LIG1 ligB; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> vg:1261486(270)27932.6417(127)45-- K10747  LIG1  [tr:O64130_BPSPB] yoqV, SPBc2p117; Bacillus virus SPbeta; hypothetical protein; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> pta:HPL003_09370(316)30430.3414(178)1-- K01971  ligD  [tr:G7W1T8_PAETH] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drs:DEHRE_05395(313)29129.2413()0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tab:CIG75_09940(318)31028.1410()0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blr:BRLA_c033610(312)30631.4406()0-- K01971  ligD  [tr:A0A075R8R9_BRELA] putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbj:VN24_04095(317)30731.6406()0-- K01971  ligD  [tr:A0A0D5NFB1_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bfm:BP422_13580(313)30927.8399()0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dmt:DESME_11395(310)30729.3392()0-- K01971  ligD  [tr:W0E9V2_9FIRM] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tum:CBW65_19490(316)23432.9391(70)0-- K01971  ligD  [tr:A0A1Y0ISD0_9BACL] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> csd:Clst_1550(303)30127.2389()0-- K01971  ligD  [tr:L7VQ94_CLOSH] ligD2; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> css:Cst_c16050(303)30127.2389()0-- K01971  ligD  [tr:L7VQ94_CLOSH] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nca:Noca_1235(311)20633.0381(154)6-- K01971  ligD  [tr:A1SG14_NOCSJ] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pste:PSTEL_06015(318)30330.4381()0-- K01971  ligD  [tr:A0A089N1Z6_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paea:R70723_04815(315)21033.3378()0-- K01971  ligD  [tr:A0A089KEC0_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paee:R70331_04855(315)29929.4376()0-- K01971  ligD  [tr:A0A089KRA0_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> toc:Toce_0249(308)30929.1374()0-- K01971  ligD  [tr:D9S0A7_THEOJ] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pow:IJ21_43250(329)20933.5371()0-- K01971  ligD  [tr:A0A0U2UUW7_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> clb:Clo1100_0393(324)31928.8370()1-- K01971  ligD  [tr:H2JI28_9CLOT] ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tco:Theco_3019(317)20931.6370()0-- K01971  ligD  [tr:L0EIU3_THECK] ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ave:Arcve_0209(324)31126.4369(46)1-- K01971  ligD  [tr:F2KNL8_ARCVS] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ndk:I601_2208(315)21233.5368(137)0-- K01971  ligD  [tr:A0A1A9GM09_9ACTN] Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tid:Thein_1426(302)30630.4368()0-- K01971  ligD  [tr:F8AA06_THEID] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pep:AQ505_12975(322)30526.9366(118)0-- K01971  ligD  [tr:A0A0P0NH57_9SPHI] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> swo:Swol_1123(309)26828.7365()0-- K01971  ligD  [tr:Q0AXX1_SYNWW] DNA ligase, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tjr:TherJR_1554(314)30826.9365()0-- K01971  ligD  [tr:D5XFI6_THEPJ] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pyg:AWM70_01390(315)21232.1364()0-- K01971  ligD  [tr:A0A1B1N6H6_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afu:AF_1725(313)30827.9363(85)1-- K01971  ligD  [tr:O28549_ARCFU] DNA ligase, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdu:PDUR_06235(312)30329.7361()0-- K01971  ligD  [tr:A0A089HKF6_PAEDU] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slp:Slip_1509(312)30227.5360()0-- K01971  ligD  [tr:D7CNI7_SYNLT] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_7844(630)30228.5358(96)5-- K01971  ligD  [tr:Q01NN0_SOLUE] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paej:H70737_05065(315)30229.1357()0-- K01971  ligD  [tr:A0A089JMM3_9BACL] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sth:STH1797(312)30727.7357()4-- K01971  ligD  [tr:Q67NG1_SYMTH] ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dau:Daud_0596(310)30228.1356()0-- K01971  ligD  [tr:B1I272_DESAP] ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> drm:Dred_2002(316)29925.4355()0-- K10747  LIG1  [tr:A4J617_DESRM] ATP dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
> mix:AB663_003164(800)22031.8354(87)0-- K01971  ligD  [tr:A0A0U4GKT0_9MICO] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pswu:SY83_12930(302)30728.7350(72)0-- K01971  ligD  [tr:A0A172TJ82_9BACL] hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paef:R50345_04800(315)30128.9349()0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pft:JBW_01943(333)21032.9347()0-- K01971  ligD  [tr:I9NUX3_9FIRM] DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psim:KR76_09220(313)20531.7346(135)2-- K01971  ligD  [tr:A0A0A1DHN7_NOCSI] DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_PE00251(354)29827.5346(83)4-- K01971  ligD  [tr:Q2K0P1_RHIEC] putative DNA ligase (ATP) protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> zpr:ZPR_3654(811)30228.8346()1-- K01971  ligD  [tr:D5BKQ2_ZUNPS] ATP-dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_PD00264(354)29827.5344(17)5-- K01971  ligD  [tr:S5S4J4_RHIET] ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...