GFIT result for
ppm
|
GFIT result for
ppm
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ppm:PPSC2_28365 (288 a.a.) |
-- |
hypothetical protein | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > pthi:NDS46_31860(289) | 289 | 69.2 | 1462 | 1 | -- | DNA polymerase LigD | |||
| > csoa:LIS82_26880(286) | 288 | 45.8 | 923 | 2 | -- | DNA polymerase LigD | |||
| > ppo:PPM_p0233(296) | 291 | 43.6 | 843 | 2 | -- | ligB; DNA ligase | |||
| > ppoy:RE92_25010(297) | 293 | 43.3 | 819 | 1 | -- | hypothetical protein | |||
| > ppeo:ABE82_26745(297) | 291 | 42.6 | 810 | 1 | -- | hypothetical protein | |||
| > pson:JI735_34725(296) | 291 | 39.9 | 754 | 2 | -- | DNA ligase | |||
| > cchl:FPL14_27395(283) | 285 | 40.0 | 671 | 1 | -- | ATP-dependent DNA ligase | |||
| > pdh:B9T62_15530(287) | 289 | 41.2 | 666 | 2 | -- | ATP-dependent DNA ligase | |||
| > pcel:HUB94_00285(282) | 284 | 37.3 | 660 | 1 | -- | ATP-dependent DNA ligase | |||
| > paen:P40081_15495(287) | 289 | 40.1 | 644 | 2 | -- | ATP-dependent DNA ligase | |||
| > pgm:PGRAT_14595(287) | 289 | 40.1 | 643 | 1 | -- | ATP-dependent DNA ligase | |||
| > ptri:KDC22_14590(287) | 289 | 39.8 | 636 | 1 | -- | ATP-dependent DNA ligase | |||
| > pib:BBD41_27165(291) | 291 | 37.8 | 622 | 3 | -- | ATP-dependent DNA ligase | |||
| > psab:PSAB_20545(289) | 290 | 37.9 | 616 | 2 | -- | ligB; ATP-dependent DNA ligase | |||
| > bon:A361_10965(271) | 285 | 39.3 | 611 | 2 | -- | ATP-dependent DNA ligase | |||
| > paun:MJA45_18315(?) | 286 | 36.7 | 611 | 0 | -- | - | |||
| > plen:EIM92_01115(287) | 288 | 36.5 | 607 | 1 | -- | ATP-dependent DNA ligase | |||
| > ppab:KET34_10625(?) | 288 | 36.5 | 607 | 0 | -- | - | |||
| > gym:GYMC10_0669(288) | 289 | 39.1 | 604 | 1 | -- | ATP dependent DNA ligase | |||
| > cohn:KCTCHS21_40110(283) | 285 | 36.5 | 595 | 1 | -- | ligB; SPBc2 prophage-derived DNA ligase-like protein LigB | |||
| > pnp:IJ22_10880(287) | 286 | 35.7 | 573 | 1 | -- | ATP-dependent DNA ligase | |||
| > pjd:Pjdr2_1127(287) | 284 | 34.2 | 561 | 1 | -- | ATP dependent DNA ligase | |||
| > pui:PUW25_27360(287) | 287 | 33.8 | 534 | 1 | -- | RNA ligase family protein | |||
| > cheb:HH215_34750(284) | 283 | 31.4 | 531 | 1 | -- | ATP-dependent DNA ligase | |||
| > hamy:MUO15_20960(?) | 287 | 34.5 | 527 | 0 | -- | - | |||
| > cpss:M5V91_29800(?) | 292 | 37.3 | 521 | 0 | -- | - | |||
| > pms:KNP414_02090(284) | 288 | 35.1 | 519 | 3 | -- | ATP dependent DNA ligase | |||
| > pmq:PM3016_2376(284) | 288 | 35.4 | 518 | 3 | -- | ATP dependent DNA ligase | |||
| > pmw:B2K_12050(284) | 288 | 35.4 | 518 | 3 | -- | ATP-dependent DNA ligase | |||
| > ndt:L1999_02135(273) | 287 | 35.5 | 513 | 2 | -- | ATP-dependent DNA ligase | |||
| > pspn:L1F29_24585(?) | 285 | 31.6 | 509 | 0 | -- | - | |||
| > ncm:QNK12_06440(274) | 286 | 35.3 | 499 | 0 | -- | ATP-dependent DNA ligase | |||
| > tki:TKV_c19040(307) | 303 | 33.3 | 499 | 0 | -- | K01971 | ligD | ligD; end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lfb:C1X05_12435(302) | 250 | 34.4 | 498 | 2 | -- | hypothetical protein | |||
| > tbo:Thebr_0487(307) | 303 | 33.3 | 498 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tex:Teth514_0952(307) | 303 | 33.3 | 498 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > thx:Thet_1965(307) | 303 | 33.3 | 498 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tpd:Teth39_0475(307) | 303 | 33.3 | 498 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > twi:Thewi_2144(307) | 303 | 33.0 | 494 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > vgu:HYG85_20945(314) | 306 | 33.0 | 484 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bayd:BSPP4475_07505(?) | 305 | 31.5 | 481 | 0 | -- | - | |||
| > tit:Thit_1868(307) | 304 | 33.2 | 480 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tmt:Tmath_1843(307) | 304 | 33.2 | 480 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > csua:IM538_09515(317) | 305 | 30.5 | 478 | 0 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > tfr:BR63_17960(325) | 304 | 31.6 | 478 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ased:IRT44_17580(316) | 305 | 31.1 | 477 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > baqu:K6959_07835(314) | 306 | 31.4 | 477 | 0 | -- | DNA ligase | |||
| > bco:Bcell_3193(314) | 307 | 31.9 | 474 | 1 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > vpy:HZI73_15440(314) | 309 | 31.4 | 474 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pkb:B4V02_23325(320) | 312 | 32.1 | 472 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gaj:MY490_03925(314) | 308 | 31.8 | 470 | 1 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > tvu:AB849_011655(313) | 314 | 30.9 | 468 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acit:HPK19_22235(314) | 307 | 31.6 | 465 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > paih:ASL14_10145(315) | 208 | 37.5 | 464 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rmf:D5E69_22740(281) | 281 | 34.5 | 461 | 0 | -- | ATP-dependent DNA ligase | |||
| > tto:Thethe_00683(307) | 304 | 33.2 | 461 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bao:BAMF_0926(270) | 280 | 34.3 | 460 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
| > liu:OU989_23080(?) | 297 | 31.0 | 460 | 0 | -- | - | |||
| > aaut:ACETAC_00730(307) | 305 | 32.5 | 459 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dfg:B0537_11885(280) | 290 | 32.1 | 456 | 0 | -- | hypothetical protein | |||
| > pprt:ET464_05550(290) | 285 | 29.8 | 455 | 0 | -- | hypothetical protein | |||
| > bgy:BGLY_2023(270) | 279 | 34.1 | 453 | 1 | -- | ATP-dependent DNA ligase | |||
| > bcl:ABC2809(277) | 290 | 32.1 | 452 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bson:S101395_02792(270) | 279 | 34.1 | 452 | 1 | -- | ligD; DNA ligase (ATP) | |||
| > bko:CKF48_19930(301) | 310 | 29.4 | 451 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppy:PPE_00335(320) | 209 | 37.3 | 450 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > alkg:MOJ78_06430(?) | 308 | 30.2 | 449 | 0 | -- | - | |||
| > ppol:X809_01490(320) | 209 | 36.8 | 448 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppq:PPSQR21_003370(320) | 209 | 38.8 | 448 | 0 | -- | K01971 | ligD | cDC9; ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpf:BpOF4_20089(222) | 229 | 33.6 | 446 | 0 | -- | ligB; ATP-dependent DNA ligase | |||
| > pwn:QNH46_19120(?) | 299 | 31.8 | 446 | 0 | -- | - | |||
| > ttm:Tthe_0704(307) | 304 | 32.6 | 441 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > baz:BAMTA208_06575(270) | 279 | 33.7 | 440 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bql:LL3_02285(270) | 279 | 33.7 | 440 | 1 | -- | ligB; SPBc2 prophage-derived DNA ligase-like protein ligB | |||
| > bxh:BAXH7_01346(270) | 279 | 33.7 | 440 | 1 | -- | yoqV; hypothetical protein | |||
| > pchi:PC41400_14640(272) | 287 | 32.4 | 440 | 2 | -- | DNA ligase | |||
| > dai:Desaci_4757(289) | 287 | 31.7 | 439 | 1 | -- | ATP dependent DNA ligase-like protein | |||
| > prz:GZH47_32380(273) | 287 | 33.4 | 439 | 1 | -- | DNA ligase | |||
| > stea:C0679_10180(322) | 305 | 30.5 | 439 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > psop:KP014_20345(275) | 286 | 31.5 | 438 | 1 | -- | DNA ligase | |||
| > bteq:G4P54_09600(270) | 279 | 33.3 | 437 | 1 | -- | ATP-dependent DNA ligase | |||
| > bamb:BAPNAU_1647(270) | 279 | 34.1 | 436 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > psua:FLK61_00230(270) | 282 | 32.3 | 436 | 0 | -- | ATP-dependent DNA ligase | |||
| > bbe:BBR47_36460(311) | 209 | 34.0 | 433 | 1 | -- | K01971 | ligD | ligB; putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsaf:BSL056_08940(270) | 279 | 33.7 | 433 | 1 | -- | ATP-dependent DNA ligase | |||
| > lsp:Bsph_p130(282) | 288 | 30.2 | 433 | 2 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bhui:LOK74_06060(317) | 307 | 29.3 | 431 | 0 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > coh:EAV92_20915(315) | 314 | 30.3 | 431 | 2 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bya:BANAU_1788(270) | 279 | 33.0 | 428 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
| > bbor:RFB14_10805(?) | 209 | 34.0 | 427 | 0 | -- | - | |||
| > txy:Thexy_0579(307) | 304 | 30.9 | 427 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afas:NZD89_27935(280) | 286 | 33.2 | 426 | 5 | -- | hypothetical protein | |||
| > bshi:LGQ02_15420(322) | 209 | 35.9 | 426 | 0 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tsh:Tsac_1306(307) | 304 | 31.6 | 426 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aaco:K1I37_19980(328) | 305 | 30.8 | 425 | 2 | -- | DNA ligase | |||
| > bama:RBAU_2060(270) | 279 | 32.6 | 425 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
| > ncd:ACONDI_02960(295) | 300 | 32.7 | 425 | 0 | -- | ligD; Multifunctional non-homologous end joining DNA repair protein LigD | |||
| > dec:DCF50_p2126(313) | 291 | 28.9 | 424 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ded:DHBDCA_p2112(313) | 291 | 28.9 | 424 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lpak:GDS87_11990(292) | 286 | 30.8 | 424 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |