KEGG   COMPOUND: C00062
Entry
C00062                      Compound                               
Name
L-Arginine;
(S)-2-Amino-5-guanidinovaleric acid;
L-Arg
Formula
C6H14N4O2
Exact mass
174.1117
Mol weight
174.20
Structure
Remark
Same as: D02982
Reaction
R00551 R00552 R00554 R00557 R00558 R00559 R00562 R00563
R00565 R00566 R00567 R00735 R00832 R00912 R01086 R01686
R01886 R01989 R03477 R03646 R05465 R05547 R08197 R09363
R09593 R09785 R10081 R10106 R10107 R10880 R11031 R11032
R11033 R11085 R11604 R11711 R11712 R12506 R12572 R12573
R12706 R12707 R12929 R13305 R13308 R13429 R13430
Pathway
map00220  Arginine biosynthesis
map00261  Monobactam biosynthesis
map00330  Arginine and proline metabolism
map00331  Clavulanic acid biosynthesis
map00470  D-Amino acid metabolism
map00970  Aminoacyl-tRNA biosynthesis
map00998  Biosynthesis of various antibiotics
map01060  Biosynthesis of plant secondary metabolites
map01064  Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01230  Biosynthesis of amino acids
map02010  ABC transporters
map04148  Efferocytosis
map04150  mTOR signaling pathway
map04974  Protein digestion and absorption
map05014  Amyotrophic lateral sclerosis
map05022  Pathways of neurodegeneration - multiple diseases
map05142  Chagas disease
map05146  Amoebiasis
map05230  Central carbon metabolism in cancer
Module
M00029  Urea cycle
M00047  Creatine pathway
M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
M00674  Clavaminate biosynthesis, arginine + glyceraldehyde-3P => clavaminate
M00736  Nocardicin A biosynthesis, L-pHPG + arginine + serine => nocardicin A
M00785  Cycloserine biosynthesis, arginine/serine => cycloserine
M00844  Arginine biosynthesis, ornithine => arginine
M00845  Arginine biosynthesis, glutamate => acetylcitrulline => arginine
M00879  Arginine succinyltransferase pathway, arginine => glutamate
M00947  D-Arginine racemization, D-arginine => L-arginine
M00978  Ornithine-ammonia cycle
Network
nt06033  Glycine, serine and arginine metabolism
nt06535  Efferocytosis
Enzyme
1.4.1.25        1.4.3.25        1.5.1.11        1.5.1.19        
1.13.12.1       1.14.11.41      1.14.13.39      1.14.14.47      
1.14.20.7       2.1.1.381       2.1.4.1         2.1.4.2         
2.1.4.3         2.1.4.4         2.1.4.5         2.3.1.109       
2.5.1.66        2.6.1.84        2.6.1.125       2.7.3.3         
3.2.2.19        3.5.3.1         3.5.3.6         3.5.3.27        
4.1.1.19        4.3.2.1         5.1.1.9         5.1.1.10        
6.1.1.19        6.2.1.63        6.3.2.11        6.3.2.24        
6.3.2.30        6.3.2.48
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00062  Arginine (Arg)
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   L-Arginine
    D02982  Arginine (USP/INN)
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D02982  L-Arginine
Other DBs
CAS: 74-79-3
PubChem: 3362
ChEBI: 16467
KNApSAcK: C00001340
PDB-CCD: ARG[PDBj] GND[PDBj]
NIKKAJI: J9.182K
LinkDB
KCF data

ATOM        12
            1   C1b C    24.1085  -18.0306
            2   C1b C    25.3110  -18.7488
            3   C1c C    22.8766  -18.7137
            4   C1b C    26.5369  -18.0657
            5   C6a C    21.7324  -17.9664
            6   N1a N    22.9232  -20.1148
            7   N1b N    27.7453  -18.7779
            8   O6a O    20.5065  -18.6494
            9   O6a O    21.6856  -16.5596
            10  C2c C    28.9714  -18.1007
            11  N1a N    30.1739  -18.8129
            12  N2a N    28.9888  -16.6938
BOND        11
            1     1   2 1
            2     1   3 1
            3     2   4 1
            4     3   5 1
            5     3   6 1 #Down
            6     4   7 1
            7     5   8 1
            8     5   9 2
            9     7  10 1
            10   10  11 1
            11   10  12 2

» Japanese version

KEGG   COMPOUND: C00037
Entry
C00037                      Compound                               
Name
Glycine;
Aminoacetic acid;
Gly
Formula
C2H5NO2
Exact mass
75.0320
Mol weight
75.07
Structure
Remark
Same as: D00011
Reaction
R00364 R00365 R00366 R00367 R00368 R00369 R00371 R00372
R00373 R00374 R00395 R00478 R00497 R00565 R00588 R00610
R00611 R00652 R00751 R00775 R00830 R00899 R00945 R01221
R01424 R01723 R01766 R01957 R02452 R02551 R02729 R03121
R03284 R03425 R03579 R03654 R03718 R03956 R03975 R04144
R04486 R04777 R04951 R05055 R05704 R05835 R05841 R06171
R07226 R07463 R08195 R08196 R08252 R08701 R08744 R09099
R09717 R09718 R10060 R10062 R10179 R10685 R10722 R10908
R10994 R11664 R12026 R12514 R12692 R12693 R12694 R12721
R12723 R12941 R12967 R13029 R13038
Pathway
map00120  Primary bile acid biosynthesis
map00230  Purine metabolism
map00260  Glycine, serine and threonine metabolism
map00310  Lysine degradation
map00440  Phosphonate and phosphinate metabolism
map00460  Cyanoamino acid metabolism
map00470  D-Amino acid metabolism
map00480  Glutathione metabolism
map00630  Glyoxylate and dicarboxylate metabolism
map00670  One carbon pool by folate
map00680  Methane metabolism
map00730  Thiamine metabolism
map00785  Lipoic acid metabolism
map00860  Porphyrin metabolism
map00970  Aminoacyl-tRNA biosynthesis
map01060  Biosynthesis of plant secondary metabolites
map01100  Metabolic pathways
map01110  Biosynthesis of secondary metabolites
map01120  Microbial metabolism in diverse environments
map01200  Carbon metabolism
map01230  Biosynthesis of amino acids
map01240  Biosynthesis of cofactors
map01502  Vancomycin resistance
map02010  ABC transporters
map02026  Biofilm formation - Escherichia coli
map04080  Neuroactive ligand-receptor interaction
map04082  Neuroactive ligand signaling
map04721  Synaptic vesicle cycle
map04974  Protein digestion and absorption
map04978  Mineral absorption
map05230  Central carbon metabolism in cancer
Module
M00346  Formaldehyde assimilation, serine pathway
M00532  Photorespiration
M00621  Glycine cleavage system
M00868  Heme biosynthesis, animals and fungi, glycine => heme
M00895  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP
M00896  Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
M00898  Thiamine biosynthesis, pyridoxal-5P => TMP/thiamine/TPP
M00974  Betaine metabolism, animals, betaine => glycine
M00975  Betaine degradation, bacteria, betaine => pyruvate
Network
nt06011  Heme biosynthesis
nt06032  Lipoic acid metabolism
nt06033  Glycine, serine and arginine metabolism
nt06038  Folate metabolism
nt06544  Neuroactive ligand signaling
Enzyme
1.4.1.1         1.4.1.10        1.4.1.27        1.4.2.1         
1.4.3.3         1.4.3.19        1.4.4.2         1.4.99.5        
1.5.1.22        1.5.3.1         1.5.3.24        1.5.7.3         
1.5.8.3         1.13.11.78      1.21.4.2        2.1.1.20        
2.1.1.156       2.1.1.162       2.1.2.1         2.1.2.4         
2.1.4.1         2.3.1.13        2.3.1.29        2.3.1.37        
2.3.1.65        2.3.1.71        2.3.1.192       2.3.1.-         
2.3.2.15        2.3.2.-         2.4.2.59        2.4.2.60        
2.6.1.4         2.6.1.35        2.6.1.44        2.6.1.45        
2.6.1.60        2.6.1.63        2.6.1.73        2.6.1.96        
2.6.1.112       2.6.1.-         3.4.11.1        3.4.11.2        
3.4.11.23       3.4.13.23       3.4.13.-        3.4.17.25       
3.5.1.24        3.5.1.32        3.5.1.58        3.5.1.71        
3.5.3.2         4.1.2.5         4.1.2.26        4.1.2.42        
4.1.2.48        4.1.2.49        4.1.2.-         4.1.3.14        
4.1.3.41        4.3.2.11        6.1.1.14        6.2.1.66        
6.3.2.3         6.3.4.13
 » show all
Brite
Compounds with biological roles [BR:br08001]
 Peptides
  Amino acids
   Common amino acids
    C00037  Glycine (Gly)
 Hormones and transmitters
  Neurotransmitters
   Amino acids
    C00037  Glycine
Anatomical Therapeutic Chemical (ATC) classification [BR:br08303]
 B BLOOD AND BLOOD FORMING ORGANS
  B05 BLOOD SUBSTITUTES AND PERFUSION SOLUTIONS
   B05C IRRIGATING SOLUTIONS
    B05CX Other irrigating solutions
     B05CX03 Glycine
      D00011  Glycine (JP18/USP) <US>
Risk category of Japanese OTC drugs [BR:br08312]
 Third-class OTC drugs
  Inorganic and organic chemicals
   Glycine
    D00011  Glycine (JP18/USP)
Drugs listed in the Japanese Pharmacopoeia [BR:br08311]
 Chemicals
  D00011  Glycine
Other DBs
CAS: 56-40-6
PubChem: 3339
ChEBI: 15428
KNApSAcK: C00001361
PDB-CCD: GLY[PDBj]
NIKKAJI: J1.163K
LinkDB
KCF data

ATOM        5
            1   C6a C    24.9184  -17.1304
            2   C1b C    26.0707  -17.8870
            3   O6a O    23.6903  -17.8231
            4   O6a O    24.9418  -15.7279
            5   N1a N    27.2837  -17.2772
BOND        4
            1     1   2 1
            2     1   3 1
            3     1   4 2
            4     2   5 1

» Japanese version

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