KEGG   PATHWAY: acs00510
Entry
acs00510                    Pathway                                
Name
N-Glycan biosynthesis - Anolis carolinensis (green anole)
Description
N-glycans or asparagine-linked glycans are major constituents of glycoproteins in eukaryotes. N-glycans are covalently attached to asparagine with the consensus sequence of Asn-X-Ser/Thr by an N-glycosidic bond, GlcNAc b1- Asn. Biosynthesis of N-glycans begins on the cytoplasmic face of the ER membrane with the transferase reaction of UDP-GlcNAc and the lipid-like precursor P-Dol (dolichol phosphate) to generate GlcNAc a1- PP-Dol. After sequential addition of monosaccharides by ALG glycosyltransferases [MD:M00055], the N-glycan precursor is attached by the OST (oligosaccharyltransferase) complex to the polypeptide chain that is being synthesized and translocated through the ER membrane. The protein-bound N-glycan precursor is subsequently trimmed, extended, and modified in the ER and Golgi by a complex series of reactions catalyzed by membrane-bound glycosidases and glycosyltransferases. N-glycans thus synthesized are classified into three types: high-mannose type, complex type, and hybrid type. Defects in N-glycan biosynthesis lead to a variety of human diseases known as congenital disorders of glycosylation [DS:H00118 H00119].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
acs00510  N-Glycan biosynthesis
acs00510

Module
acs_M00072  N-glycosylation by oligosaccharyltransferase [PATH:acs00510]
acs_M00073  N-glycan precursor trimming [PATH:acs00510]
Other DBs
GO: 0006487
Organism
Anolis carolinensis (green anole) [GN:acs]
Gene
100529108  st6gal2; ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [KO:K00779] [EC:2.4.3.1]
100529109  st6gal1; ST6 beta-galactoside alpha-2,6-sialyltransferase 1 [KO:K00778] [EC:2.4.3.1]
100551938  srd5a3; steroid 5 alpha-reductase 3 [KO:K12345] [EC:1.3.1.22 1.3.1.94]
100552304  stt3b; STT3B, catalytic subunit of the oligosaccharyltransferase complex [KO:K07151] [EC:2.4.99.18]
100552582  mgat4a; mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A [KO:K00738] [EC:2.4.1.145]
100552898  man1a1; mannosidase alpha class 1A member 1 [KO:K01230] [EC:3.2.1.113]
100552965  alg11; ALG11, alpha-1,2-mannosyltransferase [KO:K03844] [EC:2.4.1.131]
100553032  fut8; fucosyltransferase 8 [KO:K00717] [EC:2.4.1.68]
100553205  man1c1; mannosidase alpha class 1C member 1 [KO:K01230] [EC:3.2.1.113]
100553459  [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
100554968  alg13; ALG13, UDP-N-acetylglucosaminyltransferase subunit [KO:K07432] [EC:2.4.1.141]
100554974  alg9; ALG9, alpha-1,2-mannosyltransferase [KO:K03846] [EC:2.4.1.259 2.4.1.261]
100555179  dpm2; dolichyl-phosphate mannosyltransferase subunit 2, regulatory [KO:K09658]
100555505  dad1; defender against cell death 1 [KO:K12668]
100555541  ostc; oligosaccharyltransferase complex non-catalytic subunit [KO:K26501]
100555933  man2a1; mannosidase alpha class 2A member 1 [KO:K01231] [EC:3.2.1.114]
100556019  ddost; dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [KO:K12670]
100556708  [KO:K13748] [EC:2.4.1.201 2.4.1.145]
100556943  [KO:K05546] [EC:3.2.1.207]
100557092  dhrsx; dehydrogenase/reductase X-linked [KO:K11170] [EC:1.1.1.441]
100557158  [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
100557558  b4galt2; beta-1,4-galactosyltransferase 2 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
100557641  rpn2; ribophorin II [KO:K12667]
100557768  dpm1; dolichyl-phosphate mannosyltransferase subunit 1, catalytic [KO:K00721] [EC:2.4.1.83]
100558509  mogs; mannosyl-oligosaccharide glucosidase [KO:K01228] [EC:3.2.1.106]
100558708  b4galt3; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
100558792  rpn1; ribophorin I [KO:K12666]
100558987  mgat5b; mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [KO:K09661] [EC:2.4.1.-]
100559184  mgat1; mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [KO:K00726] [EC:2.4.1.101]
100559641  alg5; ALG5, dolichyl-phosphate beta-glucosyltransferase [KO:K00729] [EC:2.4.1.117]
100560474  alg12; ALG12, alpha-1,6-mannosyltransferase [KO:K03847] [EC:2.4.1.260]
100561064  b4galt1; beta-1,4-galactosyltransferase 1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
100561326  magt1; magnesium transporter 1 [KO:K19478]
100561366  alg14; ALG14, UDP-N-acetylglucosaminyltransferase subunit [KO:K07441] [EC:2.4.1.141]
100561527  alg1; ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase [KO:K03842] [EC:2.4.1.142]
100561638  mgat4c; MGAT4 family member C [KO:K13748] [EC:2.4.1.201 2.4.1.145]
100561704  man1a2; mannosidase alpha class 1A member 2 [KO:K01230] [EC:3.2.1.113]
100561775  alg3; ALG3, alpha-1,3- mannosyltransferase [KO:K03845] [EC:2.4.1.258]
100562395  man1b1; mannosidase alpha class 1B member 1 [KO:K23741]
100562892  [KO:K13748] [EC:2.4.1.201 2.4.1.145]
100563081  alg10; ALG10, alpha-1,2-glucosyltransferase [KO:K03850] [EC:2.4.1.256]
100563767  dpagt1; dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 [KO:K01001] [EC:2.7.8.15]
100564985  mgat3; mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [KO:K00737] [EC:2.4.1.144]
100565006  stt3a; STT3A, catalytic subunit of the oligosaccharyltransferase complex [KO:K07151] [EC:2.4.99.18]
100565033  mgat4b; mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B [KO:K00738] [EC:2.4.1.145]
100566008  mgat5; mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase [KO:K00744] [EC:2.4.1.155]
100566141  dpm3; dolichyl-phosphate mannosyltransferase subunit 3 [KO:K09659]
100566228  alg6; ALG6, alpha-1,3-glucosyltransferase [KO:K03848] [EC:2.4.1.267]
100566457  dolpp1; dolichyldiphosphatase 1 [KO:K07252] [EC:3.6.1.43]
100566941  tusc3; tumor suppressor candidate 3 [KO:K19478]
100567177  krtcap2; keratinocyte associated protein 2 [KO:K28202]
100567213  alg8; ALG8, alpha-1,3-glucosyltransferase [KO:K03849] [EC:2.4.1.265]
100567299  ganab; glucosidase II alpha subunit [KO:K05546] [EC:3.2.1.207]
100567828  dolk; dolichol kinase [KO:K00902] [EC:2.7.1.108]
100567983  mgat4d; MGAT4 family member D [KO:K00738] [EC:2.4.1.145]
100568077  man2a2; mannosidase alpha class 2A member 2 [KO:K01231] [EC:3.2.1.114]
103279177  alg2; ALG2, alpha-1,3/1,6-mannosyltransferase [KO:K03843] [EC:2.4.1.132 2.4.1.257]
103282902  [KO:K12345] [EC:1.3.1.22 1.3.1.94]
107983189  tmem258; transmembrane protein 258 [KO:K26502]
Compound
C00096  GDP-mannose
C00110  Dolichyl phosphate
C00381  Dolichol
C00621  Dolichyl diphosphate
C01246  Dolichyl beta-D-glucosyl phosphate
C03021  Protein asparagine
C03862  Dolichyl phosphate D-mannose
C06081  Polyprenol
C22974  ditrans,polycis-Polyprenal
C22975  Dolichal
G00001  N-Acetyl-D-glucosaminyldiphosphodolichol
G00002  N,N'-Chitobiosyldiphosphodolichol
G00003  
G00004  
G00005  
G00006  
G00007  
G00008  
G00009  
G00010  
G00011  
G00012  
G00013  
G00014  
G00015  
G00016  Core fucose
G00017  
G00018  DS 3
G00019  
G00020  
G00021  
G00022  
G00171  
G10526  
G10595  
G10596  
G10597  
G10598  
G10599  
G10694  
Reference
PMID:9111134
  Authors
Schutzbach JS.
  Title
The role of the lipid matrix in the biosynthesis of dolichyl-linked oligosaccharides.
  Journal
Glycoconj J 14:175-82 (1997)
DOI:10.1023/A:1018533620002
Reference
  Authors
Oriol R, Martinez-Duncker I, Chantret I, Mollicone R, Codogno P.
  Title
Common origin and evolution of glycosyltransferases using Dol-P-monosaccharides as donor substrate.
  Journal
Mol Biol Evol 19:1451-63 (2002)
DOI:10.1093/oxfordjournals.molbev.a004208
Reference
  Authors
Thiel C, Schwarz M, Peng J, Grzmil M, Hasilik M, Braulke T, Kohlschutter A, von Figura K, Lehle L, Korner C.
  Title
A new type of congenital disorders of glycosylation (CDG-Ii) provides new insights into the early steps of dolichol-linked oligosaccharide biosynthesis.
  Journal
J Biol Chem 278:22498-505 (2003)
DOI:10.1074/jbc.M302850200
Reference
  Authors
Cipollo JF, Trimble RB, Chi JH, Yan Q, Dean N.
  Title
The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum.
  Journal
J Biol Chem 276:21828-40 (2001)
DOI:10.1074/jbc.M010896200
Reference
  Authors
Frank CG, Aebi M.
  Title
ALG9 mannosyltransferase is involved in two different steps of lipid-linked oligosaccharide biosynthesis.
  Journal
Glycobiology 15:1156-63 (2005)
DOI:10.1093/glycob/cwj002
Reference
  Authors
O'Reilly MK, Zhang G, Imperiali B.
  Title
In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesis.
  Journal
Biochemistry 45:9593-603 (2006)
DOI:10.1021/bi060878o
Related
pathway
acs00051  Fructose and mannose metabolism
acs00511  Other glycan degradation
acs00513  Various types of N-glycan biosynthesis
acs00515  Mannose type O-glycan biosynthesis
acs00520  Amino sugar and nucleotide sugar metabolism
acs00533  Glycosaminoglycan biosynthesis - keratan sulfate
acs00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
acs00900  Terpenoid backbone biosynthesis
KO pathway
ko00510   

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