KEGG   PATHWAY: hhv04120
Entry
hhv04120                    Pathway                                
Name
Ubiquitin mediated proteolysis - Hyaena hyaena (striped hyena)
Description
Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
hhv04120  Ubiquitin mediated proteolysis
hhv04120

Other DBs
GO: 0016567
Organism
Hyaena hyaena (striped hyena) [GN:hhv]
Gene
120225503  polyubiquitin [KO:K04551]
120228705  ubiquitin [KO:K04551]
120236092  UBC; polyubiquitin-C [KO:K08770]
120229369  UBA52; ubiquitin-60S ribosomal protein L40 [KO:K02927]
120245021  ubiquitin-60S ribosomal protein L40-like isoform X1 [KO:K02927]
120242943  ubiquitin-40S ribosomal protein S27a-like [KO:K02977]
120243162  RPS27A; ubiquitin-40S ribosomal protein S27a [KO:K02977]
120226056  ubiquitin-40S ribosomal protein S27a-like [KO:K02977]
120221591  ubiquitin-40S ribosomal protein S27a-like [KO:K02977]
120240784  ubiquitin-like [KO:K02977]
120240826  ubiquitin-40S ribosomal protein S27a-like [KO:K02977]
120247899  ubiquitin-40S ribosomal protein S27a-like [KO:K02977]
120219875  UBA1; ubiquitin-like modifier-activating enzyme 1 [KO:K03178] [EC:6.2.1.45]
120242754  SAE1; SUMO-activating enzyme subunit 1 [KO:K10684] [EC:6.2.1.45]
120231703  UBA2; SUMO-activating enzyme subunit 2 [KO:K10685] [EC:6.2.1.45]
120242879  UBA3; NEDD8-activating enzyme E1 catalytic subunit isoform X1 [KO:K10686] [EC:6.2.1.64]
120229361  UBA7; ubiquitin-like modifier-activating enzyme 7 isoform X1 [KO:K10698] [EC:6.2.1.45]
120222185  UBA6; ubiquitin-like modifier-activating enzyme 6 [KO:K10699] [EC:6.2.1.45]
120222141  UBE2A; ubiquitin-conjugating enzyme E2 A [KO:K10573] [EC:2.3.2.23]
120238510  UBE2B; ubiquitin-conjugating enzyme E2 B [KO:K10574] [EC:2.3.2.23]
120243272  UBE2C; ubiquitin-conjugating enzyme E2 C [KO:K06688] [EC:2.3.2.23]
120227147  UBE2D1; ubiquitin-conjugating enzyme E2 D1 isoform X1 [KO:K06689] [EC:2.3.2.23]
120222814  UBE2D3; ubiquitin-conjugating enzyme E2 D3 [KO:K06689] [EC:2.3.2.23]
120245629  UBE2D2; ubiquitin-conjugating enzyme E2 D2 isoform X1 [KO:K06689] [EC:2.3.2.23]
120236701  UBE2E3; ubiquitin-conjugating enzyme E2 E3 [KO:K20217] [EC:2.3.2.23]
120246714  ubiquitin-conjugating enzyme E2 E3-like [KO:K20217] [EC:2.3.2.23]
120246923  ubiquitin-conjugating enzyme E2 E2 [KO:K20217] [EC:2.3.2.23]
120246927  UBE2E1; ubiquitin-conjugating enzyme E2 E1 isoform X1 [KO:K20217] [EC:2.3.2.23]
120229506  UBE2F; NEDD8-conjugating enzyme UBE2F isoform X1 [KO:K10687] [EC:2.3.2.34]
120246882  UBE2G1; ubiquitin-conjugating enzyme E2 G1 [KO:K10575] [EC:2.3.2.23]
120248682  UBE2G2; ubiquitin-conjugating enzyme E2 G2 isoform X1 [KO:K04555] [EC:2.3.2.23]
120238783  UBE2H; ubiquitin-conjugating enzyme E2 H isoform X1 [KO:K10576] [EC:2.3.2.23]
120241532  UBE2I; SUMO-conjugating enzyme UBC9 [KO:K10577]
120231887  UBE2J1; ubiquitin-conjugating enzyme E2 J1 [KO:K10578] [EC:2.3.2.23]
120242547  UBE2J2; ubiquitin-conjugating enzyme E2 J2 [KO:K04554] [EC:2.3.2.23]
120224235  ubiquitin-conjugating enzyme E2 L3-like [KO:K04552] [EC:2.3.2.23]
120238832  UBE2L3; ubiquitin-conjugating enzyme E2 L3 isoform X1 [KO:K04552] [EC:2.3.2.23]
120236482  ubiquitin-conjugating enzyme E2 L3-like [KO:K04552] [EC:2.3.2.23]
120240291  UBE2L6; ubiquitin/ISG15-conjugating enzyme E2 L6 [KO:K04553] [EC:2.3.2.23]
120227096  UBE2M; NEDD8-conjugating enzyme Ubc12 [KO:K10579] [EC:2.3.2.34]
120227820  ubiquitin-conjugating enzyme E2 N-like [KO:K10580] [EC:2.3.2.23]
120234657  UBE2N; ubiquitin-conjugating enzyme E2 N [KO:K10580] [EC:2.3.2.23]
120236232  ubiquitin-conjugating enzyme E2 N-like [KO:K10580] [EC:2.3.2.23]
120228096  UBE2O; (E3-independent) E2 ubiquitin-conjugating enzyme isoform X1 [KO:K10581] [EC:2.3.2.24]
120224486  UBE2QL1; ubiquitin-conjugating enzyme E2Q-like protein 1 [KO:K10582] [EC:2.3.2.23]
120221537  UBE2Q1; ubiquitin-conjugating enzyme E2 Q1 [KO:K10582] [EC:2.3.2.23]
120235739  UBE2Q2; ubiquitin-conjugating enzyme E2 Q2 isoform X1 [KO:K10582] [EC:2.3.2.23]
120241729  UBE2R2; ubiquitin-conjugating enzyme E2 R2 [KO:K02207] [EC:2.3.2.23]
120242352  CDC34; ubiquitin-conjugating enzyme E2 R1 isoform X1 [KO:K02207] [EC:2.3.2.23]
120239641  UBE2S; ubiquitin-conjugating enzyme E2 S [KO:K10583] [EC:2.3.2.23]
120232621  UBE2U; ubiquitin-conjugating enzyme E2 U isoform X1 [KO:K10584] [EC:2.3.2.23]
120235864  UBE2W; ubiquitin-conjugating enzyme E2 W isoform X1 [KO:K10688] [EC:2.3.2.23 2.3.2.25]
120228995  UBE2Z; ubiquitin-conjugating enzyme E2 Z [KO:K10585] [EC:2.3.2.23]
120244017  BIRC6; baculoviral IAP repeat-containing protein 6 isoform X1 [KO:K10586] [EC:2.3.2.23]
120221315  UBE3A; ubiquitin-protein ligase E3A isoform X1 [KO:K10587] [EC:2.3.2.26]
120228253  UBE3B; ubiquitin-protein ligase E3B isoform X1 [KO:K10588] [EC:2.3.2.26]
120247817  UBE3C; ubiquitin-protein ligase E3C [KO:K10589] [EC:2.3.2.26]
120234211  SMURF2; E3 ubiquitin-protein ligase SMURF2 [KO:K04678] [EC:2.3.2.26]
120227976  SMURF1; E3 ubiquitin-protein ligase SMURF1 isoform X1 [KO:K04678] [EC:2.3.2.26]
120242777  ITCH; E3 ubiquitin-protein ligase Itchy homolog isoform X1 [KO:K05632] [EC:2.3.2.26]
120225202  WWP1; NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1 [KO:K05633] [EC:2.3.2.26]
120223954  WWP2; NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1 [KO:K05630] [EC:2.3.2.26]
120233344  TRIP12; E3 ubiquitin-protein ligase TRIP12 isoform X1 [KO:K10590] [EC:2.3.2.26]
120219708  NEDD4; E3 ubiquitin-protein ligase NEDD4 isoform X1 [KO:K10591] [EC:2.3.2.26]
120230765  NEDD4L; E3 ubiquitin-protein ligase NEDD4-like isoform X1 [KO:K13305] [EC:2.3.2.26]
120222966  HUWE1; E3 ubiquitin-protein ligase HUWE1 isoform X1 [KO:K10592] [EC:2.3.2.26]
120232869  UBR5; E3 ubiquitin-protein ligase UBR5 isoform X1 [KO:K10593] [EC:2.3.2.26]
120222120  HERC1; probable E3 ubiquitin-protein ligase HERC1 isoform X1 [KO:K10594] [EC:2.3.2.26]
120222421  HERC2; E3 ubiquitin-protein ligase HERC2 [KO:K10595] [EC:2.3.2.26]
120221175  HERC3; probable E3 ubiquitin-protein ligase HERC3 isoform X1 [KO:K10614] [EC:2.3.2.26]
120232475  HERC4; probable E3 ubiquitin-protein ligase HERC4 isoform X1 [KO:K10615] [EC:2.3.2.26]
120229980  UBE4A; ubiquitin conjugation factor E4 A [KO:K10596] [EC:2.3.2.27]
120233589  UBE4B; ubiquitin conjugation factor E4 B isoform X1 [KO:K10597] [EC:2.3.2.27]
120241490  STUB1; E3 ubiquitin-protein ligase CHIP isoform X1 [KO:K09561] [EC:2.3.2.27]
120238796  PPIL2; RING-type E3 ubiquitin-protein ligase PPIL2 [KO:K10598] [EC:5.2.1.8]
120246197  PRPF19; pre-mRNA-processing factor 19 [KO:K10599] [EC:2.3.2.27]
120225599  RING finger protein 37 isoform X1 [KO:K10600]
120234269  LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Mdm2-like [KO:K06643] [EC:2.3.2.27]
120240795  MDM2; E3 ubiquitin-protein ligase Mdm2 isoform X1 [KO:K06643] [EC:2.3.2.27]
120229982  CBL; E3 ubiquitin-protein ligase CBL isoform X1 [KO:K04707] [EC:2.3.2.27]
120239104  CBLB; E3 ubiquitin-protein ligase CBL-B isoform X1 [KO:K22517] [EC:2.3.2.27]
120243253  CBLC; E3 ubiquitin-protein ligase CBL-C [KO:K22518] [EC:2.3.2.27]
120232913  E3 ubiquitin-protein ligase SIAH1-like [KO:K04506] [EC:2.3.2.27]
120238433  SIAH1; E3 ubiquitin-protein ligase SIAH1 isoform X1 [KO:K04506] [EC:2.3.2.27]
120235727  PML; protein PML isoform X1 [KO:K10054] [EC:2.3.2.-]
120232555  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
120239952  MAP3K1; mitogen-activated protein kinase kinase kinase 1 [KO:K04416] [EC:2.7.11.25]
120238567  COP1; E3 ubiquitin-protein ligase COP1 isoform X1 [KO:K10143] [EC:2.3.2.27]
120231071  RCHY1; RING finger and CHY zinc finger domain-containing protein 1 isoform X1 [KO:K10144] [EC:2.3.2.27]
120219677  LOW QUALITY PROTEIN: baculoviral IAP repeat-containing protein 3-like [KO:K16060]
120219681  BIRC2; baculoviral IAP repeat-containing protein 2 [KO:K16060]
120236173  E3 ubiquitin-protein ligase XIAP [KO:K04725] [EC:2.3.2.27]
120234923  BIRC7; baculoviral IAP repeat-containing protein 7 [KO:K16061]
120221776  PIAS1; E3 SUMO-protein ligase PIAS1 isoform X1 [KO:K04706] [EC:2.3.2.-]
120229724  PIAS2; E3 SUMO-protein ligase PIAS2 isoform X1 [KO:K16063] [EC:2.3.2.-]
120220718  PIAS3; E3 SUMO-protein ligase PIAS3 isoform X1 [KO:K16064] [EC:2.3.2.-]
120242097  PIAS4; E3 SUMO-protein ligase PIAS4 [KO:K16065] [EC:2.3.2.27]
120240114  SYVN1; E3 ubiquitin-protein ligase synoviolin [KO:K10601] [EC:2.3.2.27]
120242682  NHLRC1; E3 ubiquitin-protein ligase NHLRC1 [KO:K10602] [EC:2.3.2.27]
120240667  AIRE; autoimmune regulator [KO:K10603]
120236455  MGRN1; E3 ubiquitin-protein ligase MGRN1 isoform X1 [KO:K10604] [EC:2.3.2.27]
120226086  BRCA1; breast cancer type 1 susceptibility protein isoform X1 [KO:K10605] [EC:2.3.2.27]
120246281  FANCL; E3 ubiquitin-protein ligase FANCL isoform X1 [KO:K10606] [EC:2.3.2.27]
120233137  MID1; E3 ubiquitin-protein ligase Midline-1 isoform X1 [KO:K08285] [EC:2.3.2.27]
120240963  TRIM32; E3 ubiquitin-protein ligase TRIM32 [KO:K10607] [EC:2.3.2.27]
120241919  TRIM37; E3 ubiquitin-protein ligase TRIM37 isoform X1 [KO:K10608] [EC:2.3.2.27]
120234320  RBX1; E3 ubiquitin-protein ligase RBX1 [KO:K03868] [EC:2.3.2.32]
120234672  E3 ubiquitin-protein ligase RBX1-like [KO:K03868] [EC:2.3.2.32]
120236827  E3 ubiquitin-protein ligase RBX1-like [KO:K03868] [EC:2.3.2.32]
120246394  CUL1; cullin-1 [KO:K03347]
120237069  S-phase kinase-associated protein 1-like [KO:K03094]
120238518  SKP1; S-phase kinase-associated protein 1 [KO:K03094]
120249038  LOW QUALITY PROTEIN: S-phase kinase-associated protein 1-like [KO:K03094]
120243193  BTRC; F-box/WD repeat-containing protein 1A isoform X1 [KO:K03362]
120234082  FBXW11; F-box/WD repeat-containing protein 11 isoform X1 [KO:K03362]
120244162  SKP2; S-phase kinase-associated protein 2 [KO:K03875]
120233213  FBXW7; F-box/WD repeat-containing protein 7 isoform X1 [KO:K10260]
120233595  FBXO2; F-box only protein 2 [KO:K10099]
120233061  FBXO4; F-box only protein 4 [KO:K10291]
120247430  CUL2; cullin-2 [KO:K03870]
120237581  elongin-C-like [KO:K03872]
120235868  ELOC; elongin-C [KO:K03872]
120241503  ELOB; elongin-B [KO:K03873]
120231340  VHL; von Hippel-Lindau disease tumor suppressor [KO:K03871]
120234826  CUL3; cullin-3 isoform X1 [KO:K03869]
120244455  KEAP1; kelch-like ECH-associated protein 1 [KO:K10456]
120239868  KLHL13; kelch-like protein 13 isoform X1 [KO:K10447]
120223244  KLHL9; kelch-like protein 9 [KO:K10447]
120244133  RHOBTB1; rho-related BTB domain-containing protein 1 isoform X1 [KO:K07868]
120239487  RHOBTB2; rho-related BTB domain-containing protein 2 isoform X1 [KO:K07868]
120228328  CUL4A; cullin-4A [KO:K10609]
120223382  CUL4B; cullin-4B isoform X1 [KO:K10609]
120246155  DDB1; DNA damage-binding protein 1 [KO:K10610]
120228475  DDB2; DNA damage-binding protein 2 isoform X1 [KO:K10140]
120239505  ERCC8; DNA excision repair protein ERCC-8 isoform X1 [KO:K10570]
120220233  DET1; DET1 homolog isoform X1 [KO:K10571]
120242665  RNF7; RING-box protein 2 isoform X1 [KO:K10611]
120224569  CUL5; LOW QUALITY PROTEIN: cullin-5 [KO:K10612]
120232701  SOCS1; suppressor of cytokine signaling 1 [KO:K04694]
120228297  SOCS3; suppressor of cytokine signaling 3 [KO:K04696]
120231231  CUL7; cullin-7 [KO:K10613]
120249224  FBXW8; F-box/WD repeat-containing protein 8 [KO:K10264]
120228206  ANAPC11; anaphase-promoting complex subunit 11 [KO:K03358]
120222773  ANAPC2; anaphase-promoting complex subunit 2 [KO:K03349]
120236058  CDC20; cell division cycle protein 20 homolog [KO:K03363]
120242073  FZR1; fizzy-related protein homolog isoform X1 [KO:K03364]
120231585  ANAPC1; anaphase-promoting complex subunit 1 [KO:K03348]
120244248  CDC27; cell division cycle protein 27 homolog isoform X1 [KO:K03350]
120234706  ANAPC4; anaphase-promoting complex subunit 4 isoform X1 [KO:K03351]
120247819  ANAPC5; anaphase-promoting complex subunit 5 isoform X1 [KO:K03352]
120223462  CDC16; cell division cycle protein 16 homolog isoform X1 [KO:K03353]
120237661  ANAPC7; anaphase-promoting complex subunit 7 [KO:K03354]
120220759  CDC23; cell division cycle protein 23 homolog [KO:K03355]
120226714  ANAPC10; anaphase-promoting complex subunit 10 [KO:K03357]
120236502  CDC26; anaphase-promoting complex subunit CDC26 isoform X1 [KO:K03359]
120239528  ANAPC13; anaphase-promoting complex subunit 13 [KO:K12456]
120247214  LOW QUALITY PROTEIN: anaphase-promoting complex subunit 13-like [KO:K12456]
120245117  ANAPC15; anaphase-promoting complex subunit 15 isoform X1 [KO:K25228]
120247570  ANAPC16; anaphase-promoting complex subunit 16 [KO:K25229]
Reference
  Authors
Kamura T.
  Title
[Cullin-based E3 family]
  Journal
Tanpakushitsu Kakusan Koso 51:1167-72 (2006)
Reference
  Authors
Matsuda N.
  Title
[Overview: hereditary disorders caused by dysfunction of ubiquitylation]
  Journal
Tanpakushitsu Kakusan Koso 51:1402-7 (2006)
Reference
  Authors
Tokunaga F.
  Title
[E2 ubiquitin-conjugating enzymes: structures and functions]
  Journal
Tanpakushitsu Kakusan Koso 51:1150-6 (2006)
Reference
  Authors
Nalepa G, Rolfe M, Harper JW.
  Title
Drug discovery in the ubiquitin-proteasome system.
  Journal
Nat Rev Drug Discov 5:596-613 (2006)
DOI:10.1038/nrd2056
Reference
  Authors
Hsu YJ, Goodman SR.
  Title
Spectrin and ubiquitination: a review.
  Journal
Cell Mol Biol (Noisy-le-grand) Suppl 51:OL801-7 (2005)
Reference
  Authors
Hatakeyama S, Nakayama KI.
  Title
Ubiquitylation as a quality control system for intracellular proteins.
  Journal
J Biochem 134:1-8 (2003)
DOI:10.1093/jb/mvg106
Reference
  Authors
Lee J, Zhou P.
  Title
DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase.
  Journal
Mol Cell 26:775-80 (2007)
DOI:10.1016/j.molcel.2007.06.001
Related
pathway
hhv03050  Proteasome
KO pathway
ko04120   
LinkDB

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