KEGG   PATHWAY: dnm05322
Entry
dnm05322                    Pathway                                
Name
Systemic lupus erythematosus - Dasypus novemcinctus (nine-banded armadillo)
Description
Systemic lupus erythematosus (SLE) is a prototypic autoimmune disease characterised by the production of IgG autoantibodies that are specific for self-antigens, such as DNA, nuclear proteins and certain cytoplasmic components, in association with a diverse array of clinical manifestations. The primary pathological findings in patients with SLE are those of inflammation, vasculitis, immune complex deposition, and vasculopathy. Immune complexes comprising autoantibody and self-antigen is deposited particulary in the renal glomeruli and mediate a systemic inflammatory response by activating complement or via Fc{gamma}R-mediated neutrophil and macrophage activation. Activation of complement (C5) leads to injury both through formation of the membrane attack complex (C5b-9) or by generation of the anaphylatoxin and cell activator C5a. Neutrophils and macrophages cause tissue injury by the release of oxidants and proteases.
Class
Human Diseases; Immune disease
Pathway map
dnm05322  Systemic lupus erythematosus
dnm05322

Organism
Dasypus novemcinctus (nine-banded armadillo) [GN:dnm]
Gene
105747084  C1QA; complement C1q subcomponent subunit A [KO:K03986]
101437063  C1QB; complement C1q subcomponent subunit B [KO:K03987]
101436644  C1QC; complement C1q subcomponent subunit C [KO:K03988]
101436657  C4A; complement C4-A [KO:K03989]
101411741  histone H2A.V [KO:K11251]
101417705  histone H2A-Bbd type 2/3-like [KO:K11251]
101420368  histone H2A.J [KO:K11251]
101423158  histone H2A type 2-A [KO:K11251]
101424467  histone H2A type 2-B [KO:K11251]
101426260  histone H2A type 2-A [KO:K11251]
101413518  histone H2A.Z [KO:K11251]
101417426  core histone macro-H2A.1 [KO:K11251]
101431834  histone H2A type 1-D [KO:K11251]
101433175  histone H2A type 1-C [KO:K11251]
101436319  histone H2A type 1 [KO:K11251]
101438004  histone H2A type 1 [KO:K11251]
101440601  histone H2A type 1 [KO:K11251]
101412919  histone H2A.V-like [KO:K11251]
101445337  histone H2A type 1-J [KO:K11251]
101431110  histone H2A type 2-C [KO:K11251]
101432028  histone H2A-beta, sperm-like [KO:K11251]
101426797  histone H2A type 3 [KO:K11251]
101428091  histone H2A type 3-like [KO:K11251]
101422985  histone H2A-Bbd type 1-like [KO:K11251]
101440342  histone H2A type 1 [KO:K11251]
101442083  histone H2A type 1 [KO:K11251]
101442971  histone H2A type 1 [KO:K11251]
101444308  histone H2A type 1 [KO:K11251]
101445219  histone H2A type 1-J [KO:K11251]
101411320  histone H2A type 1-A [KO:K11251]
101434424  histone H2AX [KO:K11251]
101427678  histone H2A type 1 [KO:K11251]
101444514  core histone macro-H2A.2 [KO:K11251]
101416055  histone H2B type 2-E-like [KO:K11252]
101412852  histone H2B type 1-L-like [KO:K11252]
101429762  late histone H2B.L4-like [KO:K11252]
101445665  histone H2B type 1-K-like [KO:K11252]
101441648  histone H2B type 1-K [KO:K11252]
101424922  histone H2B type 2-E [KO:K11252]
101424030  histone H2B type 2-E [KO:K11252]
101425364  histone H2B type 2-E [KO:K11252]
101426712  histone H2B type 2-F [KO:K11252]
101442033  histone H2B type 1-A [KO:K11252]
101431410  histone H2B type 1-B [KO:K11252]
101433606  histone H2B type 1 [KO:K11252]
101434317  histone H2B type 1 [KO:K11252]
101434750  histone H2B type 1-like isoform X2 [KO:K11252]
101436727  histone H2B type 1-K [KO:K11252]
101437154  histone H2B type 1 [KO:K11252]
101437586  histone H2B type 1 [KO:K11252]
101440161  histone H2B type 1 [KO:K11252]
101441042  histone H2B type 1-like [KO:K11252]
101444887  histone H2B type 1-K [KO:K11252]
101427225  histone H2B type 3-B [KO:K11252]
101427670  histone H2B type 3-B-like [KO:K11252]
101425853  histone H2B subacrosomal variant-like [KO:K11252]
101439908  histone H2B type 2-E [KO:K11252]
101443415  histone H2B type 1-K [KO:K11252]
101412077  histone H2B type 1-F/J/L-like [KO:K11252]
105745025  histone H2B type F-S-like [KO:K11252]
101427233  histone H2B type 1-J [KO:K11252]
101415819  histone H3.3-like [KO:K11253]
101427758  histone H3.1 [KO:K11253]
101430525  histone H3.1 [KO:K11253]
101432271  histone H3.1 [KO:K11253]
101438452  uncharacterized protein LOC101438452 [KO:K11253]
101422860  histone H3.3 [KO:K11253]
101411400  histone H3.3 [KO:K11253]
101426345  histone H3.1 [KO:K11253]
101443856  LOW QUALITY PROTEIN: uncharacterized protein LOC101443856 [KO:K11253]
101446585  uncharacterized protein LOC101446585 [KO:K11253]
101422723  histone H3.3-like [KO:K11253]
101425821  histone H3 [KO:K11253]
111764591  LOW QUALITY PROTEIN: histone H4 [KO:K11254]
101428187  histone H4 [KO:K11254]
101428620  histone H4 [KO:K11254]
101432725  histone H4 [KO:K11254]
101435898  histone H4 [KO:K11254]
101441470  histone H4 [KO:K11254]
101444421  histone H4 [KO:K11254]
101417298  LOW QUALITY PROTEIN: small nuclear ribonucleoprotein-associated proteins B and B' [KO:K11086]
101429780  small nuclear ribonucleoprotein-associated proteins B and B' [KO:K11086]
111763933  small nuclear ribonucleoprotein Sm D1-like isoform X1 [KO:K11087]
101425252  SNRPD1; small nuclear ribonucleoprotein Sm D1 isoform X1 [KO:K11087]
101427063  SNRPD3; small nuclear ribonucleoprotein Sm D3 [KO:K11088]
101413339  GRIN2A; glutamate receptor ionotropic, NMDA 2A [KO:K05209]
101435311  glutamate receptor ionotropic, NMDA 2B [KO:K05210]
101426419  TRIM21; E3 ubiquitin-protein ligase TRIM21 [KO:K10651] [EC:2.3.2.27]
101444660  TROVE2; 60 kDa SS-A/Ro ribonucleoprotein [KO:K11089]
101422129  SSB; lupus La protein isoform X1 [KO:K11090]
101438860  ACTN1; alpha-actinin-1 isoform X1 [KO:K05699]
101421870  ACTN4; alpha-actinin-4 isoform X1 [KO:K05699]
101415145  LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DP beta 1 chain-like [KO:K06752]
101437028  LOW QUALITY PROTEIN: DLA class II histocompatibility antigen, DR-1 beta chain-like [KO:K06752]
101443412  LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DRB1-4 beta chain-like [KO:K06752]
101438478  HLA class II histocompatibility antigen, DR alpha chain [KO:K06752]
101440773  HLA class II histocompatibility antigen, DQ beta 2 chain-like [KO:K06752]
101433781  HLA class II histocompatibility antigen, DO beta chain isoform X1 [KO:K06752]
101435501  HLA class II histocompatibility antigen, DQ alpha 1 chain-like [KO:K06752]
101435917  HLA class II histocompatibility antigen, DQ alpha 2 chain-like isoform X1 [KO:K06752]
101436345  DLA class II histocompatibility antigen, DR-1 beta chain-like isoform X1 [KO:K06752]
101437751  HLA class II histocompatibility antigen, DRB1-4 beta chain-like [KO:K06752]
101415573  HLA class II histocompatibility antigen, DP beta 1 chain-like isoform X1 [KO:K06752]
101417015  HLA class II histocompatibility antigen, DP alpha 1 chain isoform X1 [KO:K06752]
101417743  HLA class II histocompatibility antigen, DO alpha chain isoform X1 [KO:K06752]
101421271  HLA class II histocompatibility antigen, DM alpha chain [KO:K06752]
101421706  HLA class II histocompatibility antigen, DM beta chain [KO:K06752]
101423192  CD80; T-lymphocyte activation antigen CD80 [KO:K05412]
101412832  CD86; T-lymphocyte activation antigen CD86 isoform X1 [KO:K05413]
101415501  CD28; T-cell-specific surface glycoprotein CD28 [KO:K06470]
101426835  CD40LG; CD40 ligand [KO:K03161]
101440382  CD40; tumor necrosis factor receptor superfamily member 5 [KO:K03160]
101420445  TNF; tumor necrosis factor [KO:K03156]
101422877  IFNG; interferon gamma [KO:K04687]
101417379  IL10; interleukin-10 precursor [KO:K05443]
101423469  putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8 [KO:K06856]
101422209  complement C1r subcomponent-like [KO:K01330] [EC:3.4.21.41]
101436067  C1S; complement C1s subcomponent [KO:K01331] [EC:3.4.21.42]
101421283  LOW QUALITY PROTEIN: complement C3-like [KO:K03990]
101411049  complement C3-like [KO:K03990]
101427838  C5; complement C5 [KO:K03994]
101412534  C6; complement component C6 isoform X1 [KO:K03995]
101411656  C7; complement component C7 [KO:K03996]
101424071  C8A; complement component C8 alpha chain isoform X1 [KO:K03997]
101423648  C8B; complement component C8 beta chain [KO:K03998]
101447046  C9; complement component C9 [KO:K04000]
105744603  cathepsin G [KO:K01319] [EC:3.4.21.20]
101412103  neutrophil elastase [KO:K01327] [EC:3.4.21.37]
101427594  high affinity immunoglobulin gamma Fc receptor I-like [KO:K06498]
101413806  uncharacterized protein LOC101413806 isoform X2 [KO:K06463]
Compound
C00027  Hydrogen peroxide
C00434  Double-stranded DNA
C02737  Phosphatidylserine
Reference
  Authors
Rahman A, Isenberg DA.
  Title
Systemic lupus erythematosus.
  Journal
N Engl J Med 358:929-39 (2008)
DOI:10.1056/NEJMra071297
Reference
  Authors
Mok CC, Lau CS.
  Title
Pathogenesis of systemic lupus erythematosus.
  Journal
J Clin Pathol 56:481-90 (2003)
DOI:10.1136/jcp.56.7.481
Reference
  Authors
Clatworthy MR, Smith KG.
  Title
B cells in glomerulonephritis: focus on lupus nephritis.
  Journal
Semin Immunopathol 29:337-53 (2007)
DOI:10.1007/s00281-007-0092-1
Reference
PMID:8048228
  Authors
Couser WG.
  Title
New insights into mechanisms of immune glomerular injury.
  Journal
West J Med 160:440-6 (1994)
Reference
  Authors
Cook HT, Botto M.
  Title
Mechanisms of Disease: the complement system and the pathogenesis of systemic lupus erythematosus.
  Journal
Nat Clin Pract Rheumatol 2:330-7 (2006)
DOI:10.1038/ncprheum0191
Reference
  Authors
Carroll MC.
  Title
A protective role for innate immunity in systemic lupus erythematosus.
  Journal
Nat Rev Immunol 4:825-31 (2004)
DOI:10.1038/nri1456
Reference
  Authors
Sturfelt G, Truedsson L.
  Title
Complement and its breakdown products in SLE.
  Journal
Rheumatology (Oxford) 44:1227-32 (2005)
DOI:10.1093/rheumatology/keh719
Reference
  Authors
Lu L, Kaliyaperumal A, Boumpas DT, Datta SK.
  Title
Major peptide autoepitopes for nucleosome-specific T cells of human lupus.
  Journal
J Clin Invest 104:345-55 (1999)
DOI:10.1172/JCI6801
Reference
  Authors
Zieve GW, Khusial PR.
  Title
The anti-Sm immune response in autoimmunity and cell biology.
  Journal
Autoimmun Rev 2:235-40 (2003)
DOI:10.1016/S1568-9972(03)00018-1
Reference
  Authors
Scofield RH, Farris AD, Horsfall AC, Harley JB.
  Title
Fine specificity of the autoimmune response to the Ro/SSA and La/SSB ribonucleoproteins.
  Journal
Arthritis Rheum 42:199-209 (1999)
DOI:10.1002/1529-0131(199902)42:2<199::AID-ANR1>3.0.CO;2-1
Reference
  Authors
Hoffman RW.
  Title
T cells in the pathogenesis of systemic lupus erythematosus.
  Journal
Clin Immunol 113:4-13 (2004)
DOI:10.1016/j.clim.2004.05.001
Related
pathway
dnm04060  Cytokine-cytokine receptor interaction
dnm04514  Cell adhesion molecules
dnm04610  Complement and coagulation cascades
dnm04612  Antigen processing and presentation
dnm04630  JAK-STAT signaling pathway
dnm04660  T cell receptor signaling pathway
dnm04662  B cell receptor signaling pathway
dnm04670  Leukocyte transendothelial migration
KO pathway
ko05322   
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