KEGG   PATHWAY: myb04622
Entry
myb04622                    Pathway                                
Name
RIG-I-like receptor signaling pathway - Myotis brandtii (Brandt's bat)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
myb04622  RIG-I-like receptor signaling pathway
myb04622

Organism
Myotis brandtii (Brandt's bat) [GN:myb]
Gene
102242345  probable ATP-dependent RNA helicase DDX58 [KO:K12646] [EC:5.6.2.6]
102244773  DDX58; DExD/H-box helicase 58 [KO:K12646] [EC:5.6.2.6]
102241185  IFIH1; interferon induced with helicase C domain 1 [KO:K12647] [EC:5.6.2.6]
102239497  ZNFX1; zinc finger NFX1-type containing 1 [KO:K27391]
102249156  MAVS; mitochondrial antiviral signaling protein [KO:K12648]
102244062  DHX58; DExH-box helicase 58 [KO:K12649] [EC:5.6.2.6]
102260783  TRAF3; TNF receptor associated factor 3 [KO:K03174]
102250882  TANK; TRAF family member associated NFKB activator [KO:K12650]
102247883  AZI2; 5-azacytidine induced 2 [KO:K12651]
102254165  TBKBP1; TBK1 binding protein 1 [KO:K12652]
102252013  IKBKG; inhibitor of nuclear factor kappa B kinase subunit gamma [KO:K07210]
102241250  TBK1; TANK binding kinase 1 [KO:K05410] [EC:2.7.11.10]
102248515  IKBKE; inhibitor of nuclear factor kappa B kinase subunit epsilon [KO:K07211] [EC:2.7.11.10]
102241188  IRF3; interferon regulatory factor 3 [KO:K05411]
106724769  interferon alpha-8-like [KO:K05414]
102261905  IFNB1; interferon beta 1 [KO:K05415]
102257604  interferon omega-2-like [KO:K05440]
102258813  interferon omega-2 [KO:K05440]
102259110  interferon omega-1-like [KO:K05440]
102257918  IFNE; interferon epsilon [KO:K05442]
102241125  IFNK; interferon kappa [KO:K05441]
102256618  interferon kappa [KO:K05441]
102247104  TRADD; TNFRSF1A associated via death domain [KO:K03171]
102245425  RIPK1; receptor interacting serine/threonine kinase 1 [KO:K02861] [EC:2.7.11.1]
102246377  CASP8; caspase 8 [KO:K04398] [EC:3.4.22.61]
102253536  CASP10; caspase 10 [KO:K04400] [EC:3.4.22.63]
102261467  CHUK; conserved helix-loop-helix ubiquitous kinase [KO:K04467] [EC:2.7.11.10]
102261405  IKBKB; inhibitor of nuclear factor kappa B kinase subunit beta [KO:K07209] [EC:2.7.11.10]
102261181  NFKBIB; NFKB inhibitor beta [KO:K02581]
102256580  NFKBIA; NFKB inhibitor alpha [KO:K04734]
102255251  NFKB1; nuclear factor kappa B subunit 1 [KO:K02580]
102263790  RELA; RELA proto-oncogene, NF-kB subunit [KO:K04735]
102263277  TRAF2; TNF receptor associated factor 2 [KO:K03173] [EC:2.3.2.27]
102254118  MAP3K7; mitogen-activated protein kinase kinase kinase 7 [KO:K04427] [EC:2.7.11.25]
102250946  TRAF6; TNF receptor associated factor 6 [KO:K03175] [EC:2.3.2.27]
102258632  MAP3K1; mitogen-activated protein kinase kinase kinase 1 [KO:K04416] [EC:2.7.11.25]
102259984  MAPK9; mitogen-activated protein kinase 9 [KO:K04440] [EC:2.7.11.24]
102263026  MAPK10; mitogen-activated protein kinase 10 [KO:K04440] [EC:2.7.11.24]
102246292  MAPK8; mitogen-activated protein kinase 8 [KO:K04440] [EC:2.7.11.24]
102254628  MAPK12; mitogen-activated protein kinase 12 [KO:K04441] [EC:2.7.11.24]
102248097  MAPK14; mitogen-activated protein kinase 14 [KO:K04441] [EC:2.7.11.24]
102254920  MAPK11; mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
106723559  MAPK13; mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
102243203  CXCL8; C-X-C motif chemokine ligand 8 [KO:K10030]
102246703  TNF; tumor necrosis factor [KO:K03156]
102251395  IL12A; interleukin 12A [KO:K05406]
102253394  IL12B; interleukin 12B [KO:K05425]
102242383  CXCL10; C-X-C motif chemokine ligand 10 [KO:K12671]
102242753  ADAR; adenosine deaminase, RNA specific [KO:K12968] [EC:3.5.4.37]
102247016  CYLD; CYLD lysine 63 deubiquitinase [KO:K08601] [EC:3.4.19.12]
102254436  RNF125; ring finger protein 125 [KO:K12170] [EC:2.3.2.27]
102260813  ISG15; ISG15 ubiquitin-like modifier [KO:K12159]
102259790  ATG5; autophagy related 5 [KO:K08339]
102240569  ATG12; autophagy related 12 [KO:K08336]
102243495  NLRX1; NLR family member X1 [KO:K12653]
102241202  TMEM173; transmembrane protein 173 [KO:K12654]
102256182  OTUD5; OTU deubiquitinase 5 [KO:K12655] [EC:3.4.19.12]
102246281  SIKE1; suppressor of IKBKE 1 [KO:K12656]
102260761  DDX3X; DEAD-box helicase 3, X-linked [KO:K11594] [EC:5.6.2.7]
102260935  ATP-dependent RNA helicase DDX3X [KO:K11594] [EC:5.6.2.7]
102260502  ATP-dependent RNA helicase DDX3X [KO:K11594] [EC:5.6.2.7]
102257458  PIN1; peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
102255909  TKFC; triokinase and FMN cyclase [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
myb04010  MAPK signaling pathway
myb04120  Ubiquitin mediated proteolysis
myb04210  Apoptosis
myb04630  JAK-STAT signaling pathway
KO pathway
ko04622   
LinkDB

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