KEGG   PATHWAY: sasa03022
Entry
sasa03022                   Pathway                                
Name
Basal transcription factors - Salmo salar (Atlantic salmon)
Class
Genetic Information Processing; Transcription
Pathway map
sasa03022  Basal transcription factors
sasa03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Salmo salar (Atlantic salmon) [GN:sasa]
Gene
106608227  transcription initiation factor IIA subunit 1-like [KO:K03122]
106571676  transcription initiation factor IIA subunit 1-like [KO:K03122]
106579579  TFIIA-alpha and beta-like factor [KO:K03122]
100196513  t2ag; Transcription initiation factor IIA subunit 2 [KO:K03123]
106587995  T2AG; transcription initiation factor IIA subunit 2 [KO:K03123]
106568989  transcription initiation factor IIB-like [KO:K03124]
100196268  tf2b; Transcription initiation factor IIB [KO:K03124]
106602273  TATA box-binding protein-like protein 2 [KO:K03120]
106608350  tbpl1; TATA-box binding protein like 1 [KO:K03120]
106611245  TATA-box-binding protein 2-like [KO:K03120]
106589653  TATA-box-binding protein-like [KO:K03120]
100380389  tbp; TATA box binding protein [KO:K03120]
106603388  taf1; TATA-box binding protein associated factor 1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
106567856  transcription initiation factor TFIID subunit 1-like [KO:K03125] [EC:2.3.1.48 2.7.11.1]
106572977  transcription initiation factor TFIID subunit 2 [KO:K03128]
106573021  transcription initiation factor TFIID subunit 2-like [KO:K03128]
100195219  taf7; TATA-box binding protein associated factor 7 [KO:K03132]
106572622  TAF8; transcription initiation factor TFIID subunit 8-like [KO:K14649]
100196861  taf8; TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor [KO:K14649]
106561664  transcription initiation factor TFIID subunit 3-like [KO:K14650]
106573064  transcription initiation factor TFIID subunit 3-like [KO:K14650]
106572212  TAF10; transcription initiation factor TFIID subunit 10-like [KO:K03134]
106566962  TAF10; transcription initiation factor TFIID subunit 10-like [KO:K03134]
106588642  transcription initiation factor TFIID subunit 5-like [KO:K03130]
106587481  TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
106564729  TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
106564630  transcription initiation factor TFIID subunit 5-like [KO:K03130]
106566737  taf4; TATA-box binding protein associated factor 4 [KO:K03129]
106573262  transcription initiation factor TFIID subunit 4-like [KO:K03129]
106571923  transcription initiation factor TFIID subunit 4-like [KO:K03129]
106561532  transcription initiation factor TFIID subunit 4-like [KO:K03129]
106562390  transcription initiation factor TFIID subunit 4-like [KO:K03129]
106587565  transcription initiation factor TFIID subunit 4-like [KO:K03129]
106565801  transcription initiation factor TFIID subunit 4-like [KO:K03129]
106560344  transcription initiation factor TFIID subunit 4-like [KO:K03129]
106604983  TAF12; transcription initiation factor TFIID subunit 12-like [KO:K03126]
100196787  taf12; TATA-box binding protein associated factor 12 [KO:K03126]
106602816  transcription initiation factor TFIID subunit 6-like [KO:K03131]
106560681  transcription initiation factor TFIID subunit 6-like [KO:K03131]
100380516  taf6l; TATA-box binding protein associated factor 6 like [KO:K03131]
106603584  TAF9; transcription initiation factor TFIID subunit 9-like [KO:K14535]
106567893  TAF9; transcription initiation factor TFIID subunit 9-like [KO:K14535]
100196363  taf11; TATA-box binding protein associated factor 11 [KO:K03135]
106566458  TAF13; transcription initiation factor TFIID subunit 13 [KO:K03127]
100195892  taf13; TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor [KO:K03127]
100380282  gtf2e1; general transcription factor IIE subunit 1 [KO:K03136]
100194638  general transcription factor IIE, polypeptide 2-1 [KO:K03137]
106592956  general transcription factor IIE subunit 2-like [KO:K03137]
106606806  gtf2f1; general transcription factor IIF subunit 1 [KO:K03138]
106594527  general transcription factor IIF subunit 1-like [KO:K03138]
106575000  general transcription factor IIF subunit 2-like [KO:K03139] [EC:5.6.2.-]
100380813  t2fb; Transcription initiation factor IIF subunit beta [KO:K03139] [EC:5.6.2.-]
106561818  gtf2h1; general transcription factor IIH subunit 1 [KO:K03141]
106584761  general transcription factor IIH subunit 1-like [KO:K03141]
100196672  general transcription factor IIE, polypeptide 2-2 [KO:K03142]
106585289  gtf2h3; general transcription factor IIH subunit 3 [KO:K03143]
106570683  gtf2h4; general transcription factor IIH subunit 4 [KO:K03144]
106574914  ercc3; ERCC excision repair 3, TFIIH core complex helicase subunit [KO:K10843] [EC:5.6.2.4]
100194910  ercc2; ERCC excision repair 2, TFIIH core complex helicase subunit [KO:K10844] [EC:5.6.2.3]
100196269  gtf2h5; general transcription factor IIH subunit 5 [KO:K10845]
106585021  cdk7; cyclin dependent kinase 7 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
106610973  mnat1; MNAT1, CDK activating kinase assembly factor [KO:K10842]
100194548  ccnh; cyclin H [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
sasa03020  RNA polymerase
sasa03420  Nucleotide excision repair
KO pathway
ko03022   
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