KEGG   PATHWAY: rfq04640
Entry
rfq04640                    Pathway                                
Name
Hematopoietic cell lineage - Rhinolophus ferrumequinum (greater horseshoe bat)
Description
Blood-cell development progresses from a hematopoietic stem cell (HSC), which can undergo either self-renewal or differentiation into a multilineage committed progenitor cell: a common lymphoid progenitor (CLP) or a common myeloid progenitor (CMP). A CLP gives rise to the lymphoid lineage of white blood cells or leukocytes-the natural killer (NK) cells and the T and B lymphocytes. A CMP gives rise to the myeloid lineage, which comprises the rest of the leukocytes, the erythrocytes (red blood cells), and the megakaryocytes that produce platelets important in blood clotting. Cells undergoing these differentiation process express a stage- and lineage-specific set of surface markers. Therefore cellular stages are identified by the specific expression patterns of these genes.
Class
Organismal Systems; Immune system
Pathway map
rfq04640  Hematopoietic cell lineage
rfq04640

Organism
Rhinolophus ferrumequinum (greater horseshoe bat) [GN:rfq]
Gene
117011825  GP9; platelet glycoprotein IX [KO:K06263]
117012184  CD36; platelet glycoprotein 4 isoform X1 [KO:K06259]
117012414  IL6; interleukin-6 [KO:K05405]
117012624  ITGA2B; integrin alpha-IIb [KO:K06476]
117012990  GP1BA; platelet glycoprotein Ib alpha chain [KO:K06261]
117013435  ITGB3; integrin beta-3 [KO:K06493]
117013450  ITGA3; integrin alpha-3 isoform X1 [KO:K06482]
117013523  THPO; thrombopoietin isoform X1 [KO:K06854]
117013664  CSF3; granulocyte colony-stimulating factor [KO:K05423]
117013833  CD7; T-cell antigen CD7 [KO:K06457]
117014426  IL6R; interleukin-6 receptor subunit alpha isoform X1 [KO:K05055]
117014518  GP5; platelet glycoprotein V [KO:K06260]
117014945  CD1D; LOW QUALITY PROTEIN: antigen-presenting glycoprotein CD1d [KO:K06448]
117014994  CSF1; macrophage colony-stimulating factor 1 isoform X1 [KO:K05453]
117015038  CR1; LOW QUALITY PROTEIN: complement receptor type 1 [KO:K04011]
117015118  CR2; complement receptor type 2 isoform X1 [KO:K04012]
117015119  [KO:K06752]
117015259  FCGR1A; high affinity immunoglobulin gamma Fc receptor I isoform X1 [KO:K06498]
117015264  CD1E; T-cell surface glycoprotein CD1e, membrane-associated isoform X1 [KO:K06448]
117015265  [KO:K06448]
117015267  CD1C; T-cell surface glycoprotein CD1c [KO:K06448]
117015276  CD55; complement decay-accelerating factor isoform X1 [KO:K04006]
117015356  [KO:K06752]
117015401  CD34; hematopoietic progenitor cell antigen CD34 [KO:K06474]
117015456  CD2; T-cell surface antigen CD2 [KO:K06449]
117016395  CD14; monocyte differentiation antigen CD14 [KO:K04391]
117016537  CSF1R; macrophage colony-stimulating factor 1 receptor [KO:K05090] [EC:2.7.10.1]
117016873  [KO:K06752]
117016880  [KO:K06752]
117016884  [KO:K06752]
117017055  [KO:K04736]
117017056  IL5; LOW QUALITY PROTEIN: interleukin-5 [KO:K05428]
117017057  IL4; interleukin-4 [KO:K05430]
117017067  CSF2; granulocyte-macrophage colony-stimulating factor [KO:K05427]
117017533  GP1BB; platelet glycoprotein Ib beta chain [KO:K06262]
117018907  ANPEP; aminopeptidase N [KO:K11140] [EC:3.4.11.2]
117019205  IL2RA; interleukin-2 receptor subunit alpha [KO:K05068]
117019267  IL1B; interleukin-1 beta [KO:K04519]
117019304  IL1A; interleukin-1 alpha [KO:K04383]
117019374  CD19; B-lymphocyte antigen CD19 [KO:K06465]
117019454  ITGAM; integrin alpha-M [KO:K06461]
117019646  IL9R; interleukin-9 receptor [KO:K05073]
117019653  IL4R; LOW QUALITY PROTEIN: interleukin-4 receptor subunit alpha [KO:K05071]
117020172  [KO:K06752]
117020208  [KO:K06752]
117020338  TNF; tumor necrosis factor [KO:K03156]
117020364  [KO:K06752]
117020754  [KO:K06752]
117020887  [KO:K06752]
117020899  [KO:K06752]
117021070  FLT3; receptor-type tyrosine-protein kinase FLT3 [KO:K05092] [EC:2.7.10.1]
117021922  [KO:K01242] [EC:3.2.2.6 2.4.99.20]
117021923  [KO:K01242] [EC:3.2.2.6 2.4.99.20]
117022389  KIT; mast/stem cell growth factor receptor Kit isoform X1 [KO:K05091] [EC:2.7.10.1]
117024085  [KO:K06856]
117024646  EPO; erythropoietin [KO:K05437]
117025154  IL7R; interleukin-7 receptor subunit alpha [KO:K05072]
117025275  ITGA2; integrin alpha-2 [KO:K06481]
117025342  ITGA1; integrin alpha-1 isoform X1 [KO:K06480]
117025777  ITGA4; LOW QUALITY PROTEIN: integrin alpha-4 [KO:K06483]
117026132  ITGA6; integrin alpha-6 isoform X1 [KO:K06485]
117027656  CSF3R; granulocyte colony-stimulating factor receptor isoform X1 [KO:K05061]
117028364  ITGA5; integrin alpha-5 [KO:K06484]
117028565  [KO:K05066]
117028935  CD4; T-cell surface glycoprotein CD4 [KO:K06454]
117029147  KITLG; kit ligand isoform X1 [KO:K05461]
117029270  CD9; CD9 antigen [KO:K06460]
117029540  IL3RA; interleukin-3 receptor subunit alpha isoform X1 [KO:K04737]
117029597  MS4A1; B-lymphocyte antigen CD20 [KO:K06466]
117029810  CD3D; T-cell surface glycoprotein CD3 delta chain [KO:K06450]
117029892  CD3G; T-cell surface glycoprotein CD3 gamma chain [KO:K06452]
117029905  CD5; T-cell surface glycoprotein CD5 [KO:K06455]
117030447  CD3E; T-cell surface glycoprotein CD3 epsilon chain [KO:K06451]
117030577  CD44; CD44 antigen isoform X1 [KO:K06256]
117030786  CD59; CD59 glycoprotein [KO:K04008]
117032099  IL11RA; interleukin-11 receptor subunit alpha isoform X1 [KO:K05056]
117032640  CD8A; T-cell surface glycoprotein CD8 alpha chain isoform X1 [KO:K06458]
117032649  IL1R2; interleukin-1 receptor type 2 isoform X1 [KO:K04387]
117033109  CD8B; T-cell surface glycoprotein CD8 beta chain [KO:K06459]
117033273  MME; neprilysin [KO:K01389] [EC:3.4.24.11]
117033297  IL1R1; interleukin-1 receptor type 1 [KO:K04386]
117033503  TFRC; transferrin receptor protein 1 isoform X1 [KO:K06503]
117033967  IL7; interleukin-7 isoform X1 [KO:K05431]
117034353  FLT3LG; fms-related tyrosine kinase 3 ligand isoform X1 [KO:K05454]
117034419  [KO:K06473]
117034773  CD37; leukocyte antigen CD37 isoform X1 [KO:K06475]
117034923  CD22; B-cell receptor CD22 isoform X1 [KO:K06467]
117035167  IL11; interleukin-11 isoform X1 [KO:K05417]
117035914  DNTT; DNA nucleotidylexotransferase isoform X1 [KO:K00977] [EC:2.7.7.31]
117037098  IL5RA; interleukin-5 receptor subunit alpha [KO:K05067]
117037399  [KO:K06575]
117037466  EPOR; erythropoietin receptor [KO:K05079]
117038058  FCER2; low affinity immunoglobulin epsilon Fc receptor [KO:K06468]
Reference
  Authors
Janeway CA Jr, Travers P, Walport M, Shlomchik MJ
  Title
Immunobiology - International editon: The immune system in health and disease
  Journal
Harcourt Publishers Ltd, a subsidiary of Harcourt International Ltd (2001)
Reference
  Authors
Abe T
  Title
[Atlas of malignancies in hematopoietic organ - Morphology, immunology, chromosome and gene] (In Japanese)
  Journal
Nihonijishinhousya (2000)
Reference
  Authors
Rothenberg EV, Taghon T.
  Title
Molecular genetics of T cell development.
  Journal
Annu Rev Immunol 23:601-49 (2005)
DOI:10.1146/annurev.immunol.23.021704.115737
Reference
  Authors
Ceredig R, Rolink T.
  Title
A positive look at double-negative thymocytes.
  Journal
Nat Rev Immunol 2:888-97 (2002)
DOI:10.1038/nri937
Reference
  Authors
de Bruijn MF, Speck NA.
  Title
Core-binding factors in hematopoiesis and immune function.
  Journal
Oncogene 23:4238-48 (2004)
DOI:10.1038/sj.onc.1207763
Reference
  Authors
Radtke F, Wilson A, Mancini SJ, MacDonald HR.
  Title
Notch regulation of lymphocyte development and function.
  Journal
Nat Immunol 5:247-53 (2004)
DOI:10.1038/ni1045
Reference
  Authors
Spits H.
  Title
Development of alphabeta T cells in the human thymus.
  Journal
Nat Rev Immunol 2:760-72 (2002)
DOI:10.1038/nri913
Reference
PMID:9927518
  Authors
Di Santo JP, Aifantis I, Rosmaraki E, Garcia C, Feinberg J, Fehling HJ, Fischer A, von Boehmer H, Rocha B.
  Title
The common cytokine receptor gamma chain and the pre-T cell receptor provide independent but critically overlapping signals in early alpha/beta T cell development.
  Journal
J Exp Med 189:563-74 (1999)
DOI:10.1084/jem.189.3.563
Reference
  Authors
Mak TW, Penninger JM, Ohashi PS.
  Title
Knockout mice: a paradigm shift in modern immunology.
  Journal
Nat Rev Immunol 1:11-9 (2001)
DOI:10.1038/35095551
Reference
  Authors
Shapiro-Shelef M, Calame K.
  Title
Regulation of plasma-cell development.
  Journal
Nat Rev Immunol 5:230-42 (2005)
DOI:10.1038/nri1572
Reference
  Authors
Maillard I, Adler SH, Pear WS.
  Title
Notch and the immune system.
  Journal
Immunity 19:781-91 (2003)
DOI:10.1016/S1074-7613(03)00325-X
Reference
  Authors
Alpdogan O, van den Brink MR.
  Title
IL-7 and IL-15: therapeutic cytokines for immunodeficiency.
  Journal
Trends Immunol 26:56-64 (2005)
DOI:10.1016/j.it.2004.11.002
KO pathway
ko04640   

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