| |
KO |
 09100 Metabolism
|
|
|
 09120 Genetic Information Processing
|
|
|
09121 Transcription
|
03020 RNA polymerase [PATH:ppsc03020]
|
 EHS13_01270 DNA-directed RNA polymerase subunit alpha
EHS13_01090 rpoB; DNA-directed RNA polymerase subunit beta
EHS13_01095 rpoC; DNA-directed RNA polymerase subunit beta'
EHS13_32415 DNA-directed RNA polymerase subunit delta
EHS13_19670 DNA-directed RNA polymerase subunit omega
|
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
|
03022 Basal transcription factors [PATH:ppsc03022]
|
03040 Spliceosome
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:ppsc03000]
|
03021 Transcription machinery [BR:ppsc03021]
|
EHS13_19740 DEAD/DEAH box helicase
EHS13_31550 ATP-dependent DNA helicase
EHS13_01270 DNA-directed RNA polymerase subunit alpha
EHS13_01090 rpoB; DNA-directed RNA polymerase subunit beta
EHS13_01095 rpoC; DNA-directed RNA polymerase subunit beta'
EHS13_32415 DNA-directed RNA polymerase subunit delta
EHS13_19670 DNA-directed RNA polymerase subunit omega
EHS13_13015 rpoD; RNA polymerase sigma factor RpoD
EHS13_32200 sigW; RNA polymerase sigma factor SigW
EHS13_17925 sigZ; RNA polymerase sigma factor SigZ
EHS13_28955 sigma-70 family RNA polymerase sigma factor
EHS13_12585 sigK; RNA polymerase sporulation sigma factor SigK
EHS13_14500 sigF; RNA polymerase sporulation sigma factor SigF
EHS13_01040 sigH; RNA polymerase sporulation sigma factor SigH
EHS13_13300 sigE; RNA polymerase sporulation sigma factor SigE
EHS13_13305 sigG; RNA polymerase sporulation sigma factor SigG
EHS13_26100 sigI; RNA polymerase sigma factor SigI
EHS13_15890 FliA/WhiG family RNA polymerase sigma factor
EHS13_19995 sigma-70 family RNA polymerase sigma factor
EHS13_15970 nusA; transcription termination/antitermination protein NusA
EHS13_20525 nusB; transcription antitermination factor NusB
EHS13_01060 nusG; transcription termination/antitermination protein NusG
EHS13_18110 GAF domain-containing protein
EHS13_29030 fused response regulator/phosphatase
EHS13_28970 anti-sigma factor antagonist
EHS13_18120 ATP-binding protein
EHS13_28960 rsbW; anti-sigma B factor RsbW
EHS13_28965 rsbW; anti-sigma B factor RsbW
EHS13_29185 greA; transcription elongation factor GreA
EHS13_01685 greA; transcription elongation factor GreA
EHS13_32390 transcription termination factor Rho
|
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:3.6.4.12]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:3.6.4.12]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03086 rpoD; RNA polymerase primary sigma factor
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03090 sigB; RNA polymerase sigma-B factor
K03091 sigH; RNA polymerase sporulation-specific sigma factor
K03091 sigH; RNA polymerase sporulation-specific sigma factor
K03091 sigH; RNA polymerase sporulation-specific sigma factor
K03091 sigH; RNA polymerase sporulation-specific sigma factor
K03091 sigH; RNA polymerase sporulation-specific sigma factor
K03093 sigI; RNA polymerase sigma factor
K02405 fliA; RNA polymerase sigma factor FliA
K24072 xpf; positive control factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
K04749 rsbV; anti-sigma B factor antagonist
K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
K03624 greA; transcription elongation factor GreA
K03624 greA; transcription elongation factor GreA
K03628 rho; transcription termination factor Rho
|
03019 Messenger RNA biogenesis [BR:ppsc03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:ppsc03011]
|
03009 Ribosome biogenesis [BR:ppsc03009]
|
03016 Transfer RNA biogenesis [BR:ppsc03016]
|
03012 Translation factors [BR:ppsc03012]
|
03110 Chaperones and folding catalysts [BR:ppsc03110]
|
04131 Membrane trafficking [BR:ppsc04131]
|
04121 Ubiquitin system
|
03051 Proteasome [BR:ppsc03051]
|
03032 DNA replication proteins [BR:ppsc03032]
|
03036 Chromosome and associated proteins [BR:ppsc03036]
|
03400 DNA repair and recombination proteins [BR:ppsc03400]
|
EHS13_28795 methylated-DNA--[protein]-cysteine S-methyltransferase
EHS13_10255 uracil-DNA glycosylase
EHS13_16235 DNA-3-methyladenine glycosylase
EHS13_28820 mutY; A/G-specific adenine glycosylase
EHS13_18960 nth; endonuclease III
EHS13_19740 DEAD/DEAH box helicase
EHS13_31550 ATP-dependent DNA helicase
EHS13_02295 (deoxy)nucleoside triphosphate pyrophosphohydrolase
EHS13_12385 8-oxo-dGTP diphosphatase
EHS13_13475 (deoxy)nucleoside triphosphate pyrophosphohydrolase
EHS13_29375 NUDIX domain-containing protein
EHS13_23990 NUDIX domain-containing protein
EHS13_16030 dUTP diphosphatase
EHS13_04980 methylphosphotriester-DNA--protein-cysteine methyltransferase family protein
EHS13_14110 methylated-DNA--[protein]-cysteine S-methyltransferase
EHS13_31720 methylated-DNA--[protein]-cysteine S-methyltransferase
EHS13_03420 DNA-3-methyladenine glycosylase 2
EHS13_16490 Fpg/Nei family DNA glycosylase
EHS13_23155 mutM; DNA-formamidopyrimidine glycosylase
EHS13_32590 xth; exodeoxyribonuclease III
EHS13_16495 deoxyribonuclease IV
EHS13_26770 deoxyribonuclease IV
EHS13_11300 recJ; single-stranded-DNA-specific exonuclease RecJ
EHS13_00935 ligA; NAD-dependent DNA ligase LigA
EHS13_23160 polA; DNA polymerase I
EHS13_15075 uvrA; excinuclease ABC subunit UvrA
EHS13_00760 uvrA; excinuclease ABC subunit UvrA
EHS13_00755 uvrB; excinuclease ABC subunit UvrB
EHS13_08635 uvrC; excinuclease ABC subunit UvrC
EHS13_31190 ATP-dependent helicase
EHS13_03950 DNA helicase UvrD
EHS13_17990 helicase
EHS13_00930 pcrA; DNA helicase PcrA
EHS13_31935 helicase
EHS13_01090 rpoB; DNA-directed RNA polymerase subunit beta
EHS13_01095 rpoC; DNA-directed RNA polymerase subunit beta'
EHS13_01270 DNA-directed RNA polymerase subunit alpha
EHS13_32415 DNA-directed RNA polymerase subunit delta
EHS13_19670 DNA-directed RNA polymerase subunit omega
EHS13_01510 mfd; transcription-repair coupling factor
EHS13_18465 mutS; DNA mismatch repair protein MutS
EHS13_25335 endonuclease MutS2
EHS13_15270 DNA mismatch repair protein MutS
EHS13_18455 mutL; DNA mismatch repair endonuclease MutL
EHS13_20515 exodeoxyribonuclease VII large subunit
EHS13_20510 xseB; exodeoxyribonuclease VII small subunit
EHS13_24405 DNA polymerase III subunit alpha
EHS13_15960 PolC-type DNA polymerase III
EHS13_00010 dnaN; DNA polymerase III subunit beta
EHS13_12780 holA; DNA polymerase III subunit delta
EHS13_01385 holB; DNA polymerase III subunit delta'
EHS13_20045 3'-5' exonuclease
EHS13_03955 3'-5' exonuclease
EHS13_22365 3'-5' exonuclease
EHS13_32365 dnaX; DNA polymerase III subunit gamma/tau
EHS13_35910 ssb; single-stranded DNA-binding protein
EHS13_13640 DNA adenine methylase
EHS13_16140 recA; recombinase RecA
EHS13_11230 ruvA; Holliday junction branch migration protein RuvA
EHS13_11235 ruvB; Holliday junction branch migration DNA helicase RuvB
EHS13_13630 hypothetical protein
EHS13_11225 ruvC; crossover junction endodeoxyribonuclease RuvC
EHS13_19660 priA; primosomal protein N'
EHS13_13600 SMC family ATPase
EHS13_12915 SMC family ATPase
EHS13_13590 sbcD; exonuclease subunit SbcD
EHS13_12910 exonuclease SbcCD subunit D
EHS13_22225 DNA repair exonuclease
EHS13_00980 radA; DNA repair protein RadA
EHS13_00020 recF; DNA replication/repair protein RecF
EHS13_19590 recG; ATP-dependent DNA helicase RecG
EHS13_12985 recO; DNA repair protein RecO
EHS13_32355 recR; recombination protein RecR
EHS13_20460 recN; DNA repair protein RecN
EHS13_12900 addA; helicase-exonuclease AddAB subunit AddA
EHS13_12895 addB; helicase-exonuclease AddAB subunit AddB
EHS13_20200 Ku protein
EHS13_07975 Ku protein
EHS13_15365 Ku protein
EHS13_07980 DNA polymerase domain-containing protein
EHS13_07985 DNA ligase
EHS13_15370 DNA polymerase domain-containing protein
EHS13_00035 gyrA; DNA gyrase subunit A
EHS13_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B
EHS13_30465 ArsR family transcriptional regulator
EHS13_15705 topA; type I DNA topoisomerase
EHS13_19370 HU family DNA-binding protein
EHS13_01535 HU family DNA-binding protein
EHS13_20105 hypothetical protein
EHS13_03765 recQ; DNA helicase RecQ
EHS13_22335 DNA polymerase IV
EHS13_18380 lexA; transcriptional repressor LexA
EHS13_16145 RecX family transcriptional regulator
EHS13_17995 ATP-dependent DNA helicase
EHS13_19095 dinG; ATP-dependent helicase DinG
EHS13_01815 DEAD/DEAH box helicase
EHS13_22015 ribonucleoside-diphosphate reductase
EHS13_14200 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha
EHS13_25460 ribonucleoside-diphosphate reductase subunit alpha
EHS13_14205 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta
EHS13_25465 ribonucleotide-diphosphate reductase subunit beta
EHS13_15995 bifunctional oligoribonuclease/PAP phosphatase NrnA
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTH; endonuclease III [EC:4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:3.6.4.12]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:3.6.4.12]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP pyrophosphatase [EC:3.6.1.23]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03657 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA [EC:3.6.4.12]
K03551 ruvB; holliday junction DNA helicase RuvB [EC:3.6.4.12]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:3.6.4.12]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:3.1.-.- 3.6.4.12]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:3.1.-.- 3.6.4.12]
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:3.6.4.12]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:3.6.4.12]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
|
03029 Mitochondrial biogenesis [BR:ppsc03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|
KEGG Orthology (KO) - Paenibacillus psychroresistens