KEGG Orthology (KO) - Paenibacillus psychroresistens

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
     03020 RNA polymerase [PATH:ppsc03020]
       EHS13_01090 rpoB; DNA-directed RNA polymerase subunit beta
       EHS13_01095 rpoC; DNA-directed RNA polymerase subunit beta'
       EHS13_01270 DNA-directed RNA polymerase subunit alpha
       EHS13_19670 DNA-directed RNA polymerase subunit omega
       EHS13_32415 DNA-directed RNA polymerase subunit delta
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
     03022 Basal transcription factors [PATH:ppsc03022]
     03040 Spliceosome
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:ppsc03000]
     03021 Transcription machinery [BR:ppsc03021]
       EHS13_19740 DEAD/DEAH box helicase
       EHS13_31550 ATP-dependent DNA helicase
       EHS13_01270 DNA-directed RNA polymerase subunit alpha
       EHS13_01090 rpoB; DNA-directed RNA polymerase subunit beta
       EHS13_01095 rpoC; DNA-directed RNA polymerase subunit beta'
       EHS13_32415 DNA-directed RNA polymerase subunit delta
       EHS13_19670 DNA-directed RNA polymerase subunit omega
       EHS13_13015 rpoD; RNA polymerase sigma factor RpoD
       EHS13_00135 sigma-70 family RNA polymerase sigma factor
       EHS13_03150 RNA polymerase sigma factor
       EHS13_04110 RNA polymerase sigma factor
       EHS13_06820 sigma-70 family RNA polymerase sigma factor
       EHS13_11695 sigW; RNA polymerase sigma factor SigW
       EHS13_12010 RNA polymerase sigma factor
       EHS13_12770 sigma-70 family RNA polymerase sigma factor
       EHS13_17025 sigma-70 family RNA polymerase sigma factor
       EHS13_17275 RNA polymerase sigma factor
       EHS13_17925 sigZ; RNA polymerase sigma factor SigZ
       EHS13_21985 sigma-70 family RNA polymerase sigma factor
       EHS13_25425 sigma-70 family RNA polymerase sigma factor
       EHS13_25730 RNA polymerase sigma factor
       EHS13_28685 RNA polymerase sigma factor
       EHS13_31040 RNA polymerase sigma factor
       EHS13_32200 sigW; RNA polymerase sigma factor SigW
       EHS13_33555 sigma-70 family RNA polymerase sigma factor
       EHS13_28955 sigma-70 family RNA polymerase sigma factor
       EHS13_12585 sigK; RNA polymerase sporulation sigma factor SigK
       EHS13_13300 sigE; RNA polymerase sporulation sigma factor SigE
       EHS13_13305 sigG; RNA polymerase sporulation sigma factor SigG
       EHS13_14500 sigF; RNA polymerase sporulation sigma factor SigF
       EHS13_01040 sigH; RNA polymerase sporulation sigma factor SigH
       EHS13_26100 sigI; RNA polymerase sigma factor SigI
       EHS13_15890 FliA/WhiG family RNA polymerase sigma factor
       EHS13_19995 sigma-70 family RNA polymerase sigma factor
       EHS13_15970 nusA; transcription termination/antitermination protein NusA
       EHS13_20525 nusB; transcription antitermination factor NusB
       EHS13_01060 nusG; transcription termination/antitermination protein NusG
       EHS13_18110 GAF domain-containing protein
       EHS13_29030 fused response regulator/phosphatase
       EHS13_28970 anti-sigma factor antagonist
       EHS13_18120 ATP-binding protein
       EHS13_28960 rsbW; anti-sigma B factor RsbW
       EHS13_28965 rsbW; anti-sigma B factor RsbW
       EHS13_01685 greA; transcription elongation factor GreA
       EHS13_29185 greA; transcription elongation factor GreA
       EHS13_32390 transcription termination factor Rho
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03086 rpoD; RNA polymerase primary sigma factor
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
K03090 sigB; RNA polymerase sigma-B factor
K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
K27000 sigH; RNA polymerase sigma-H factor
K03093 sigI; RNA polymerase sigma-I factor
K02405 fliA; RNA polymerase sigma factor FliA
K24072 xpf; positive control factor
K02600 nusA; transcription termination/antitermination protein NusA
K03625 nusB; transcription antitermination protein NusB
K02601 nusG; transcription termination/antitermination protein NusG
K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
K04749 rsbV; anti-sigma B factor antagonist
K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
K03624 greA; transcription elongation factor GreA
K03624 greA; transcription elongation factor GreA
K03628 rho; transcription termination factor Rho
     03019 Messenger RNA biogenesis [BR:ppsc03019]
     03041 Spliceosome
     03011 Ribosome [BR:ppsc03011]
     03009 Ribosome biogenesis [BR:ppsc03009]
     03016 Transfer RNA biogenesis [BR:ppsc03016]
     03012 Translation factors [BR:ppsc03012]
     03110 Chaperones and folding catalysts [BR:ppsc03110]
     04131 Membrane trafficking [BR:ppsc04131]
     04121 Ubiquitin system
     03051 Proteasome [BR:ppsc03051]
     03032 DNA replication proteins [BR:ppsc03032]
     03036 Chromosome and associated proteins [BR:ppsc03036]
     03400 DNA repair and recombination proteins [BR:ppsc03400]
       EHS13_28795 methylated-DNA--[protein]-cysteine S-methyltransferase
       EHS13_10255 uracil-DNA glycosylase
       EHS13_16235 DNA-3-methyladenine glycosylase
       EHS13_28820 mutY; A/G-specific adenine glycosylase
       EHS13_18960 nth; endonuclease III
       EHS13_19740 DEAD/DEAH box helicase
       EHS13_31550 ATP-dependent DNA helicase
       EHS13_02295 (deoxy)nucleoside triphosphate pyrophosphohydrolase
       EHS13_12385 8-oxo-dGTP diphosphatase
       EHS13_13475 (deoxy)nucleoside triphosphate pyrophosphohydrolase
       EHS13_23990 NUDIX domain-containing protein
       EHS13_29375 NUDIX domain-containing protein
       EHS13_16030 dUTP diphosphatase
       EHS13_04980 methylphosphotriester-DNA--protein-cysteine methyltransferase family protein
       EHS13_14110 methylated-DNA--[protein]-cysteine S-methyltransferase
       EHS13_31720 methylated-DNA--[protein]-cysteine S-methyltransferase
       EHS13_03420 DNA-3-methyladenine glycosylase 2
       EHS13_16490 Fpg/Nei family DNA glycosylase
       EHS13_23155 mutM; DNA-formamidopyrimidine glycosylase
       EHS13_32590 xth; exodeoxyribonuclease III
       EHS13_16495 deoxyribonuclease IV
       EHS13_26770 deoxyribonuclease IV
       EHS13_11300 recJ; single-stranded-DNA-specific exonuclease RecJ
       EHS13_00935 ligA; NAD-dependent DNA ligase LigA
       EHS13_23160 polA; DNA polymerase I
       EHS13_00760 uvrA; excinuclease ABC subunit UvrA
       EHS13_15075 uvrA; excinuclease ABC subunit UvrA
       EHS13_00755 uvrB; excinuclease ABC subunit UvrB
       EHS13_08635 uvrC; excinuclease ABC subunit UvrC
       EHS13_00930 pcrA; DNA helicase PcrA
       EHS13_03950 DNA helicase UvrD
       EHS13_17990 helicase
       EHS13_31190 ATP-dependent helicase
       EHS13_31935 helicase
       EHS13_01090 rpoB; DNA-directed RNA polymerase subunit beta
       EHS13_01095 rpoC; DNA-directed RNA polymerase subunit beta'
       EHS13_01270 DNA-directed RNA polymerase subunit alpha
       EHS13_32415 DNA-directed RNA polymerase subunit delta
       EHS13_19670 DNA-directed RNA polymerase subunit omega
       EHS13_01510 mfd; transcription-repair coupling factor
       EHS13_18465 mutS; DNA mismatch repair protein MutS
       EHS13_15270 DNA mismatch repair protein MutS
       EHS13_25335 endonuclease MutS2
       EHS13_18455 mutL; DNA mismatch repair endonuclease MutL
       EHS13_20515 exodeoxyribonuclease VII large subunit
       EHS13_20510 xseB; exodeoxyribonuclease VII small subunit
       EHS13_24405 DNA polymerase III subunit alpha
       EHS13_15960 PolC-type DNA polymerase III
       EHS13_00010 dnaN; DNA polymerase III subunit beta
       EHS13_12780 holA; DNA polymerase III subunit delta
       EHS13_01385 holB; DNA polymerase III subunit delta'
       EHS13_03955 3'-5' exonuclease
       EHS13_20045 3'-5' exonuclease
       EHS13_22365 3'-5' exonuclease
       EHS13_32365 dnaX; DNA polymerase III subunit gamma/tau
       EHS13_35910 ssb; single-stranded DNA-binding protein
       EHS13_13640 DNA adenine methylase
       EHS13_16140 recA; recombinase RecA
       EHS13_11230 ruvA; Holliday junction branch migration protein RuvA
       EHS13_11235 ruvB; Holliday junction branch migration DNA helicase RuvB
       EHS13_11225 ruvC; crossover junction endodeoxyribonuclease RuvC
       EHS13_13630 hypothetical protein
       EHS13_19660 priA; primosomal protein N'
       EHS13_12915 SMC family ATPase
       EHS13_13600 SMC family ATPase
       EHS13_12910 exonuclease SbcCD subunit D
       EHS13_13590 sbcD; exonuclease subunit SbcD
       EHS13_00980 radA; DNA repair protein RadA
       EHS13_00020 recF; DNA replication/repair protein RecF
       EHS13_19590 recG; ATP-dependent DNA helicase RecG
       EHS13_12985 recO; DNA repair protein RecO
       EHS13_32355 recR; recombination protein RecR
       EHS13_20460 recN; DNA repair protein RecN
       EHS13_12900 addA; helicase-exonuclease AddAB subunit AddA
       EHS13_12895 addB; helicase-exonuclease AddAB subunit AddB
       EHS13_07975 Ku protein
       EHS13_15365 Ku protein
       EHS13_20200 Ku protein
       EHS13_07980 DNA polymerase domain-containing protein
       EHS13_07985 DNA ligase
       EHS13_15370 DNA polymerase domain-containing protein
       EHS13_00035 gyrA; DNA gyrase subunit A
       EHS13_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B
       EHS13_30465 ArsR family transcriptional regulator
       EHS13_15705 topA; type I DNA topoisomerase
       EHS13_01535 HU family DNA-binding protein
       EHS13_19370 HU family DNA-binding protein
       EHS13_20105 hypothetical protein
       EHS13_03765 recQ; DNA helicase RecQ
       EHS13_15295 DNA polymerase IV
       EHS13_22335 DNA polymerase IV
       EHS13_18380 lexA; transcriptional repressor LexA
       EHS13_16145 RecX family transcriptional regulator
       EHS13_17995 ATP-dependent DNA helicase
       EHS13_19095 dinG; ATP-dependent helicase DinG
       EHS13_01815 DEAD/DEAH box helicase
       EHS13_14200 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha
       EHS13_22015 ribonucleoside-diphosphate reductase
       EHS13_25460 ribonucleoside-diphosphate reductase subunit alpha
       EHS13_14205 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta
       EHS13_25465 ribonucleotide-diphosphate reductase subunit beta
       EHS13_15995 bifunctional oligoribonuclease/PAP phosphatase NrnA
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:ppsc03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

[ KO | BRITE | KEGG2 | KEGG ]
Last updated: July 9, 2025