09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:strd03030]
03410 Base excision repair [PATH:strd03410]
03420 Nucleotide excision repair [PATH:strd03420]
03430 Mismatch repair [PATH:strd03430]
03440 Homologous recombination [PATH:strd03440]
03450 Non-homologous end-joining [PATH:strd03450]
NI25_01550 DNA repair protein NI25_12640 DNA repair protein NI25_35060 ATP-dependent DNA ligase NI25_12645 ATP-dependent DNA ligase NI25_05905 ATP-dependent DNA ligase
K10979 ku; DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:strd03000]
03021 Transcription machinery [BR:strd03021]
03019 Messenger RNA biogenesis [BR:strd03019]
03041 Spliceosome
03011 Ribosome [BR:strd03011]
03009 Ribosome biogenesis [BR:strd03009]
03016 Transfer RNA biogenesis [BR:strd03016]
03012 Translation factors [BR:strd03012]
03110 Chaperones and folding catalysts [BR:strd03110]
04131 Membrane trafficking [BR:strd04131]
04121 Ubiquitin system [BR:strd04121]
03051 Proteasome [BR:strd03051]
03032 DNA replication proteins [BR:strd03032]
03036 Chromosome and associated proteins [BR:strd03036]
03400 DNA repair and recombination proteins [BR:strd03400]
NI25_08620 cysteine methyltransferase NI25_06090 cysteine methyltransferase NI25_29320 cysteine methyltransferase NI25_03570 deoxyribodipyrimidine photolyase NI25_33645 uracil-DNA glycosylase NI25_32485 uracil-DNA glycosylase NI25_30245 3-methyladenine DNA glycosylase NI25_16920 adenine glycosylase NI25_17455 endonuclease NI25_21915 helicase NI25_21095 DNA mismatch repair protein MutT NI25_10100 DNA hydrolase NI25_13655 DNA mismatch repair protein MutT NI25_30385 NUDIX hydrolase NI25_19955 NUDIX hydrolase NI25_09890 deoxyuridine 5'-triphosphate nucleotidohydrolase NI25_03575 deoxyribodipyrimidine photolyase NI25_33975 DNA repair protein NI25_32980 DNA glycosylase NI25_16405 DNA polymerase NI25_29220 uracil-DNA glycosylase NI25_08625 AraC family transcriptional regulator NI25_06095 DNA-3-methyladenine glycosylase NI25_13450 3-methyladenine DNA glycosylase NI25_11325 formamidopyrimidine-DNA glycosylase NI25_03315 DNA lyase NI25_10420 DNA glycosylase NI25_25850 DNA glycosylase NI25_06320 exodeoxyribonuclease III NI25_22840 exodeoxyribonuclease III NI25_28620 endonuclease IV NI25_04780 endonuclease V NI25_35820 DNA ligase NI25_11750 NAD-dependent DNA ligase LigA NI25_29155 DNA polymerase I NI25_29380 excinuclease ABC subunit A NI25_03180 ABC transporter NI25_29335 excinuclease ABC subunit B NI25_29405 excinuclease ABC subunit C NI25_13235 ATP-dependent DNA helicase NI25_13255 ATP-dependent DNA helicase NI25_14940 ATP-dependent DNA helicase PcrA NI25_27875 hypothetical protein NI25_15760 DNA-directed RNA polymerase subunit beta NI25_15755 DNA-directed RNA polymerase subunit beta' NI25_15300 DNA-directed RNA polymerase subunit alpha NI25_31820 DNA-directed RNA polymerase subunit omega NI25_23245 transcription-repair coupling factor NI25_13755 exodeoxyribonuclease VII large subunit NI25_13760 exodeoxyribonuclease VII small subunit NI25_28855 DNA polymerase III subunit alpha NI25_19200 DNA polymerase III subunit beta NI25_26240 hypothetical protein NI25_17315 DNA polymerase III subunit delta' NI25_31545 DNA polymerase III subunit epsilon NI25_08945 DNA polymerase III subunit epsilon NI25_20280 DNA polymerase III subunit epsilon NI25_30070 DNA polymerase III subunit epsilon NI25_01395 DNA polymerase III NI25_20045 DNA polymerase III subunit gamma/tau NI25_19345 single-stranded DNA-binding protein NI25_25585 single-stranded DNA-binding protein NI25_17585 DNA mismatch repair protein Vsr NI25_25260 helicase NI25_10375 recombinase RecA NI25_31620 ATP-dependent DNA helicase RuvA NI25_31625 ATP-dependent DNA helicase RuvB NI25_31615 Holliday junction resolvase NI25_31835 primosome assembly protein PriA NI25_32695 exonuclease NI25_32690 exonuclease SbcD NI25_16905 DNA repair protein RadA NI25_19190 recombinase RecF NI25_11360 ATP-dependent DNA helicase RecG NI25_26485 DNA recombination protein RecO NI25_17740 recombinase RecR NI25_30320 DNA recombination protein RecN NI25_01550 DNA repair protein NI25_12640 DNA repair protein NI25_35060 ATP-dependent DNA ligase NI25_12645 ATP-dependent DNA ligase NI25_05905 ATP-dependent DNA ligase NI25_10015 DNA topoisomerase IV subunit A NI25_19175 DNA gyrase subunit A NI25_10070 DNA topoisomerase IV subunit B NI25_19180 DNA gyrase subunit B NI25_17325 DNA topoisomerase I NI25_24010 integration host factor NI25_11415 DNA-binding protein NI25_20275 hypothetical protein NI25_10145 ATP-dependent DNA helicase RecQ NI25_16190 ATP-dependent DNA helicase RecQ NI25_10205 LexA family transcriptional regulator NI25_30500 DNA polymerase III subunit alpha NI25_10370 recombinase RecX NI25_10210 ATP-dependent helicase NI25_10415 DEAD/DEAH box helicase NI25_30345 ADP-ribose pyrophosphatase NI25_16100 NUDIX hydrolase NI25_27885 NUDIX hydrolase NI25_13035 ribonucleoside-diphosphate reductase NI25_10195 vitamin B12-dependent ribonucleotide reductase NI25_13040 ribonucleoside-diphosphate reductase
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K03546 sbcC; DNA repair protein SbcC/Rad50 K03547 sbcD; DNA repair protein SbcD/Mre11 K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K10979 ku; DNA end-binding protein Ku K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K07455 recT; recombination protein RecT K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K01356 lexA; repressor LexA [EC:3.4.21.88] K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
03029 Mitochondrial biogenesis [BR:strd03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Streptomyces sp. CCM_MD2014 KEGG Orthology (KO) - Streptomyces sp. CCM_MD2014