GFIT result for
lsp
|
GFIT result for
lsp
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| lsp:Bsph_p130 (282 a.a.) |
-- |
K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > lyb:C3943_17795(291) | 284 | 68.0 | 1355 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > liu:OU989_23080(?) | 280 | 67.9 | 1309 | 0 | -- | - | |||
| > lpak:GDS87_11990(292) | 282 | 66.3 | 1304 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lagr:FJQ98_16255(292) | 284 | 64.8 | 1297 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lys:LBYS11_16190(291) | 284 | 65.1 | 1282 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bco:Bcell_0182(300) | 281 | 56.9 | 1076 | 1 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pspn:L1F29_26975(?) | 282 | 47.2 | 928 | 0 | -- | - | |||
| > afas:NZD89_20915(302) | 283 | 50.5 | 923 | 5 | -- | DNA ligase | |||
| > prz:GZH47_21070(302) | 281 | 47.7 | 919 | 2 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > adau:NZD86_09185(294) | 283 | 48.4 | 892 | 1 | -- | DNA ligase | |||
| > tum:CBW65_10305(351) | 283 | 42.0 | 834 | 1 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > palb:EJC50_29255(305) | 284 | 43.0 | 818 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pkp:SK3146_00033(?) | 275 | 42.2 | 759 | 0 | -- | - | |||
| > pms:KNP414_03977(303) | 281 | 36.7 | 669 | 3 | -- | K01971 | ligD | putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmw:B2K_27655(303) | 284 | 35.6 | 660 | 4 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmq:PM3016_5352(303) | 281 | 36.3 | 658 | 4 | -- | K01971 | ligD | putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aaco:K1I37_21230(303) | 285 | 40.0 | 654 | 1 | -- | DNA ligase | |||
| > pswu:SY83_19110(301) | 270 | 34.4 | 556 | 1 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pjd:Pjdr2_1127(287) | 275 | 34.5 | 550 | 1 | -- | ATP dependent DNA ligase | |||
| > pgm:PGRAT_14595(287) | 285 | 34.4 | 543 | 1 | -- | ATP-dependent DNA ligase | |||
| > pib:BBD41_03215(288) | 282 | 32.3 | 536 | 3 | -- | ATP-dependent DNA ligase | |||
| > pdh:B9T62_15530(287) | 285 | 33.3 | 535 | 2 | -- | ATP-dependent DNA ligase | |||
| > plen:EIM92_01115(287) | 285 | 33.0 | 532 | 1 | -- | ATP-dependent DNA ligase | |||
| > paen:P40081_15495(287) | 285 | 34.4 | 531 | 2 | -- | ATP-dependent DNA ligase | |||
| > gym:GYMC10_0669(288) | 285 | 31.9 | 527 | 1 | -- | ATP dependent DNA ligase | |||
| > aaut:ACETAC_00730(307) | 287 | 31.7 | 526 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tki:TKV_c19040(307) | 286 | 31.8 | 525 | 0 | -- | K01971 | ligD | ligD; end joining DNA repair protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tto:Thethe_00683(307) | 290 | 30.0 | 518 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > twi:Thewi_2144(307) | 287 | 32.1 | 518 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tex:Teth514_0952(307) | 286 | 31.5 | 517 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > thx:Thet_1965(307) | 286 | 31.5 | 517 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ptri:KDC22_14590(287) | 285 | 33.3 | 516 | 1 | -- | ATP-dependent DNA ligase | |||
| > tbo:Thebr_0487(307) | 286 | 31.5 | 515 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tpd:Teth39_0475(307) | 286 | 31.5 | 515 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tsh:Tsac_1306(307) | 288 | 29.2 | 514 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tit:Thit_1868(307) | 286 | 31.5 | 512 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tmt:Tmath_1843(307) | 286 | 31.5 | 512 | 0 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ttm:Tthe_0704(307) | 288 | 30.2 | 512 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > txy:Thexy_0579(307) | 287 | 30.0 | 511 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mik:FOE78_14435(859) | 301 | 32.9 | 510 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ahb:bsdtb5_21830(316) | 289 | 30.4 | 507 | 0 | -- | ATP-dependent DNA ligase | |||
| > paun:MJA45_18315(?) | 284 | 33.5 | 506 | 0 | -- | - | |||
| > hamy:MUO15_20960(?) | 273 | 32.2 | 504 | 0 | -- | - | |||
| > cmiu:B1H56_01800(320) | 291 | 33.0 | 503 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppab:KET34_10625(?) | 283 | 31.4 | 503 | 0 | -- | - | |||
| > drm:Dred_2002(316) | 293 | 31.4 | 502 | 0 | -- | ATP dependent DNA ligase | |||
| > ppo:PPM_2737(286) | 284 | 31.7 | 498 | 3 | -- | ligB3; ATP-dependent DNA ligase | |||
| > agro:JSQ78_09845(?) | 290 | 31.0 | 495 | 0 | -- | - | |||
| > sman:C12CBH8_16480(317) | 293 | 31.7 | 493 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dku:Desku_0983(318) | 293 | 33.8 | 484 | 0 | -- | DNA polymerase LigD, ligase domain protein | |||
| > vgu:HYG85_20945(314) | 286 | 33.6 | 483 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pson:JI735_01345(291) | 289 | 31.5 | 482 | 2 | -- | ATP-dependent DNA ligase | |||
| > bon:A361_28375(282) | 273 | 33.0 | 481 | 2 | -- | hypothetical protein | |||
| > cpss:M5V91_29800(?) | 273 | 33.0 | 481 | 0 | -- | - | |||
| > ifn:GM661_13815(291) | 282 | 31.2 | 481 | 0 | -- | hypothetical protein | |||
| > psab:PSAB_20545(289) | 284 | 29.9 | 479 | 2 | -- | ligB; ATP-dependent DNA ligase | |||
| > bsol:FSW04_15890(798) | 304 | 31.9 | 478 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gaj:MY490_01485(283) | 282 | 30.9 | 478 | 1 | -- | hypothetical protein | |||
| > hals:D7D81_16705(291) | 282 | 31.2 | 477 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cmh:VO01_09615(836) | 299 | 32.8 | 474 | 13 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > keb:GXN75_08825(303) | 287 | 32.1 | 472 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > palm:RBG61_06675(?) | 288 | 29.5 | 472 | 0 | -- | - | |||
| > pth:PTH_1243(324) | 293 | 31.1 | 470 | 1 | -- | K01971 | ligD | CDC9; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccap:AES38_10105(833) | 299 | 32.4 | 469 | 16 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acit:HPK19_19530(283) | 282 | 30.1 | 468 | 1 | -- | ATP-dependent DNA ligase | |||
| > ofo:BRW83_1415(318) | 294 | 29.9 | 468 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aarg:Aargi30884_24150(309) | 287 | 29.3 | 467 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bshi:LGQ02_15420(322) | 288 | 30.2 | 467 | 0 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ehn:H9Q80_17575(310) | 289 | 29.8 | 467 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > czh:H9X71_10415(835) | 299 | 31.8 | 465 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dgi:Desgi_1818(322) | 294 | 29.6 | 464 | 1 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aba:Acid345_0779(608) | 300 | 32.0 | 463 | 4 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > prd:F7984_05765(313) | 283 | 30.4 | 463 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cmr:Cycma_1183(808) | 298 | 32.2 | 462 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > absi:A9CBEGH2_21710(309) | 287 | 28.9 | 461 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bala:DSM104299_02990(808) | 308 | 30.8 | 460 | 0 | -- | ATP-dependent DNA ligase | |||
| > csh:Closa_1417(307) | 287 | 27.9 | 460 | 1 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acta:C1701_04550(477) | 301 | 29.9 | 459 | 9 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pnp:IJ22_50350(319) | 292 | 31.2 | 459 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > prop:QQ658_00755(905) | 302 | 29.5 | 458 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bao:BAMF_0926(270) | 279 | 31.2 | 457 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
| > ccaf:FGD68_12820(842) | 299 | 31.8 | 457 | 13 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cchl:FPL14_27395(283) | 284 | 31.7 | 457 | 1 | -- | ATP-dependent DNA ligase | |||
| > tvu:AB849_011655(313) | 283 | 30.4 | 456 | 0 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dru:Desru_1852(316) | 293 | 30.0 | 455 | 1 | -- | DNA polymerase LigD, ligase domain protein | |||
| > arf:AR1Y2_0855(309) | 290 | 29.3 | 454 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cmc:CMN_02036(834) | 299 | 31.8 | 453 | 9 | -- | K01971 | ligD | ligD; Cmm ortholog CMM_2074; Cms ortholog CMS_1156 (pseudogene); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > led:BBK82_36775(480) | 299 | 29.4 | 453 | 6 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcel:HUB94_23705(326) | 267 | 32.2 | 453 | 1 | -- | DNA ligase | |||
| > cpha:FGI33_02765(839) | 298 | 31.2 | 451 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pthi:NDS46_31860(289) | 293 | 31.7 | 451 | 1 | -- | DNA polymerase LigD | |||
| > mta:Moth_1488(320) | 286 | 31.5 | 449 | 1 | -- | ATP dependent DNA ligase, central | |||
| > mtho:MOTHE_c14780(320) | 286 | 31.5 | 449 | 1 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mthz:MOTHA_c15630(320) | 286 | 31.5 | 449 | 1 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smis:LDL76_08210(818) | 295 | 30.5 | 449 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lcg:L3BBH23_14170(311) | 289 | 29.1 | 448 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > qdo:H9Q78_05315(313) | 291 | 32.3 | 448 | 0 | -- | DNA ligase | |||
| > cmi:CMM_2074(832) | 299 | 31.1 | 446 | 10 | -- | K01971 | ligD | conserved hypothetical protein/ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sald:FVA74_07970(826) | 289 | 30.8 | 444 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acae:HYG86_09510(302) | 286 | 29.7 | 443 | 0 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |