KEGG   PATHWAY: csab00510
Entry
csab00510                   Pathway                                
Name
N-Glycan biosynthesis - Chlorocebus sabaeus (green monkey)
Description
N-glycans or asparagine-linked glycans are major constituents of glycoproteins in eukaryotes. N-glycans are covalently attached to asparagine with the consensus sequence of Asn-X-Ser/Thr by an N-glycosidic bond, GlcNAc b1- Asn. Biosynthesis of N-glycans begins on the cytoplasmic face of the ER membrane with the transferase reaction of UDP-GlcNAc and the lipid-like precursor P-Dol (dolichol phosphate) to generate GlcNAc a1- PP-Dol. After sequential addition of monosaccharides by ALG glycosyltransferases [MD:M00055], the N-glycan precursor is attached by the OST (oligosaccharyltransferase) complex to the polypeptide chain that is being synthesized and translocated through the ER membrane. The protein-bound N-glycan precursor is subsequently trimmed, extended, and modified in the ER and Golgi by a complex series of reactions catalyzed by membrane-bound glycosidases and glycosyltransferases. N-glycans thus synthesized are classified into three types: high-mannose type, complex type, and hybrid type. Defects in N-glycan biosynthesis lead to a variety of human diseases known as congenital disorders of glycosylation [DS:H00118 H00119].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
csab00510  N-Glycan biosynthesis
csab00510

Module
csab_M00072  N-glycosylation by oligosaccharyltransferase [PATH:csab00510]
csab_M00073  N-glycan precursor trimming [PATH:csab00510]
csab_M00075  N-glycan biosynthesis, complex type [PATH:csab00510]
Other DBs
GO: 0006487
Organism
Chlorocebus sabaeus (green monkey) [GN:csab]
Gene
103214290  ALG5; ALG5, dolichyl-phosphate beta-glucosyltransferase [KO:K00729] [EC:2.4.1.117]
103214468  ALG11; ALG11, alpha-1,2-mannosyltransferase [KO:K03844] [EC:2.4.1.131]
103215375  TUSC3; tumor suppressor candidate 3 [KO:K19478]
103216975  MGAT5; mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase [KO:K00744] [EC:2.4.1.155]
103218846  [KO:K03850] [EC:2.4.1.256]
103219138  ALG2; ALG2, alpha-1,3/1,6-mannosyltransferase [KO:K03843] [EC:2.4.1.132 2.4.1.257]
103219294  B4GALT1; beta-1,4-galactosyltransferase 1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
103220027  MOGS; mannosyl-oligosaccharide glucosidase [KO:K01228] [EC:3.2.1.106]
103221139  ALG3; ALG3, alpha-1,3- mannosyltransferase [KO:K03845] [EC:2.4.1.258]
103223343  MGAT3; mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [KO:K00737] [EC:2.4.1.144]
103223543  ALG12; ALG12, alpha-1,6-mannosyltransferase [KO:K03847] [EC:2.4.1.260]
103223692  B4GALT3; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
103223891  KRTCAP2; keratinocyte associated protein 2 [KO:K28202]
103223894  DPM3; dolichyl-phosphate mannosyltransferase subunit 3 [KO:K09659]
103224125  MAN1A2; mannosidase alpha class 1A member 2 [KO:K01230] [EC:3.2.1.113]
103224397  ALG14; ALG14, UDP-N-acetylglucosaminyltransferase subunit [KO:K07441] [EC:2.4.1.141]
103224694  ALG6; ALG6, alpha-1,3-glucosyltransferase [KO:K03848] [EC:2.4.1.267]
103224947  B4GALT2; beta-1,4-galactosyltransferase 2 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
103225120  [KO:K19478]
103225352  MAN1C1; mannosidase alpha class 1C member 1 [KO:K01230] [EC:3.2.1.113]
103225449  DDOST; dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [KO:K12670]
103227830  ALG1; ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase [KO:K03842] [EC:2.4.1.142]
103228090  RPN1; ribophorin I [KO:K12666]
103228939  MGAT2; mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [KO:K00736] [EC:2.4.1.143]
103229185  FUT8; fucosyltransferase 8 [KO:K00717] [EC:2.4.1.68]
103230293  [KO:K13748] [EC:2.4.1.201 2.4.1.145]
103231182  MAN2A2; mannosidase alpha class 2A member 2 [KO:K01231] [EC:3.2.1.114]
103231439  DAD1; defender against cell death 1 [KO:K12668]
103231531  DHRSX; dehydrogenase/reductase X-linked [KO:K11170] [EC:1.1.1.441]
103232232  [KO:K19478]
103232498  ALG13; ALG13, UDP-N-acetylglucosaminyltransferase subunit [KO:K07432] [EC:2.4.1.141]
103233997  GANAB; glucosidase II alpha subunit [KO:K05546] [EC:3.2.1.207]
103234205  TMEM258; transmembrane protein 258 [KO:K26502]
103235668  SRD5A3; steroid 5 alpha-reductase 3 [KO:K12345] [EC:1.3.1.22 1.3.1.94]
103236093  OSTC; oligosaccharyltransferase complex non-catalytic subunit [KO:K26501]
103236295  MGAT4D; MGAT4 family member D [KO:K00738] [EC:2.4.1.145]
103238817  MGAT4C; MGAT4 family member C [KO:K13748] [EC:2.4.1.201 2.4.1.145]
103239582  MAN1B1; mannosidase alpha class 1B member 1 [KO:K23741]
103239777  DOLPP1; dolichyldiphosphatase 1 [KO:K07252] [EC:3.6.1.43]
103239779  DOLK; dolichol kinase [KO:K00902] [EC:2.7.1.108]
103239816  DPM2; dolichyl-phosphate mannosyltransferase subunit 2, regulatory [KO:K09658]
103240478  MAN1A1; mannosidase alpha class 1A member 1 [KO:K01230] [EC:3.2.1.113]
103241101  MGAT4A; mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A [KO:K00738] [EC:2.4.1.145]
103241198  ST6GAL2; ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [KO:K00779] [EC:2.4.3.1]
103241813  STT3B; STT3B, catalytic subunit of the oligosaccharyltransferase complex [KO:K07151] [EC:2.4.99.18]
103241877  ST6GAL1; ST6 beta-galactoside alpha-2,6-sialyltransferase 1 [KO:K00778] [EC:2.4.3.1]
103242981  MGAT5B; mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [KO:K09661] [EC:2.4.1.-]
103244295  DPM1; dolichyl-phosphate mannosyltransferase subunit 1, catalytic [KO:K00721] [EC:2.4.1.83]
103244316  MAN2A1; mannosidase alpha class 2A member 1 [KO:K01231] [EC:3.2.1.114]
103245113  MGAT4B; mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B [KO:K00738] [EC:2.4.1.145]
103245131  MGAT1; mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [KO:K00726] [EC:2.4.1.101]
103246432  RPN2; ribophorin II [KO:K12667]
103248107  ALG8; ALG8, alpha-1,3-glucosyltransferase [KO:K03849] [EC:2.4.1.265]
103248445  ALG9; ALG9, alpha-1,2-mannosyltransferase [KO:K03846] [EC:2.4.1.259 2.4.1.261]
103248621  DPAGT1; dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 [KO:K01001] [EC:2.7.8.15]
103248767  STT3A; STT3A, catalytic subunit of the oligosaccharyltransferase complex [KO:K07151] [EC:2.4.99.18]
Compound
C00096  GDP-mannose
C00110  Dolichyl phosphate
C00381  Dolichol
C00621  Dolichyl diphosphate
C01246  Dolichyl beta-D-glucosyl phosphate
C03021  Protein asparagine
C03862  Dolichyl phosphate D-mannose
C06081  Polyprenol
C22974  ditrans,polycis-Polyprenal
C22975  Dolichal
G00001  N-Acetyl-D-glucosaminyldiphosphodolichol
G00002  N,N'-Chitobiosyldiphosphodolichol
G00003  
G00004  
G00005  
G00006  
G00007  
G00008  
G00009  
G00010  
G00011  
G00012  
G00013  
G00014  
G00015  
G00016  Core fucose
G00017  
G00018  DS 3
G00019  
G00020  
G00021  
G00022  
G00171  
G10526  
G10595  
G10596  
G10597  
G10598  
G10599  
G10694  
Reference
PMID:9111134
  Authors
Schutzbach JS.
  Title
The role of the lipid matrix in the biosynthesis of dolichyl-linked oligosaccharides.
  Journal
Glycoconj J 14:175-82 (1997)
DOI:10.1023/A:1018533620002
Reference
  Authors
Oriol R, Martinez-Duncker I, Chantret I, Mollicone R, Codogno P.
  Title
Common origin and evolution of glycosyltransferases using Dol-P-monosaccharides as donor substrate.
  Journal
Mol Biol Evol 19:1451-63 (2002)
DOI:10.1093/oxfordjournals.molbev.a004208
Reference
  Authors
Thiel C, Schwarz M, Peng J, Grzmil M, Hasilik M, Braulke T, Kohlschutter A, von Figura K, Lehle L, Korner C.
  Title
A new type of congenital disorders of glycosylation (CDG-Ii) provides new insights into the early steps of dolichol-linked oligosaccharide biosynthesis.
  Journal
J Biol Chem 278:22498-505 (2003)
DOI:10.1074/jbc.M302850200
Reference
  Authors
Cipollo JF, Trimble RB, Chi JH, Yan Q, Dean N.
  Title
The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum.
  Journal
J Biol Chem 276:21828-40 (2001)
DOI:10.1074/jbc.M010896200
Reference
  Authors
Frank CG, Aebi M.
  Title
ALG9 mannosyltransferase is involved in two different steps of lipid-linked oligosaccharide biosynthesis.
  Journal
Glycobiology 15:1156-63 (2005)
DOI:10.1093/glycob/cwj002
Reference
  Authors
O'Reilly MK, Zhang G, Imperiali B.
  Title
In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesis.
  Journal
Biochemistry 45:9593-603 (2006)
DOI:10.1021/bi060878o
Related
pathway
csab00051  Fructose and mannose metabolism
csab00511  Other glycan degradation
csab00513  Various types of N-glycan biosynthesis
csab00515  Mannose type O-glycan biosynthesis
csab00520  Amino sugar and nucleotide sugar metabolism
csab00533  Glycosaminoglycan biosynthesis - keratan sulfate
csab00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
csab00900  Terpenoid backbone biosynthesis
KO pathway
ko00510   

DBGET integrated database retrieval system