KEGG   PATHWAY: csab04120
Entry
csab04120                   Pathway                                
Name
Ubiquitin mediated proteolysis - Chlorocebus sabaeus (green monkey)
Description
Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
csab04120  Ubiquitin mediated proteolysis
csab04120

Other DBs
GO: 0016567
Organism
Chlorocebus sabaeus (green monkey) [GN:csab]
Gene
103242447  UBB; ubiquitin B [KO:K04551]
103239352  UBC; ubiquitin C [KO:K04551]
103226351  ubiquitin-like [KO:K02927]
103234186  UBA52; ubiquitin A-52 residue ribosomal protein fusion product 1 [KO:K02927]
103241789  ubiquitin-like [KO:K02927]
103237381  ubiquitin-like [KO:K02927]
103220242  RPS27A; ribosomal protein S27a [KO:K02977]
103231883  UBA1; ubiquitin like modifier activating enzyme 1 [KO:K03178] [EC:6.2.1.45]
103235523  SAE1; SUMO1 activating enzyme subunit 1 [KO:K10684] [EC:6.2.1.45]
103234472  UBA2; ubiquitin like modifier activating enzyme 2 [KO:K10685] [EC:6.2.1.45]
103227873  UBA3; ubiquitin like modifier activating enzyme 3 [KO:K10686] [EC:6.2.1.64]
103227647  UBA7; ubiquitin like modifier activating enzyme 7 [KO:K10698] [EC:6.2.1.45]
103235603  UBA6; ubiquitin like modifier activating enzyme 6 [KO:K10699] [EC:6.2.1.45]
103247335  UBE2A; ubiquitin conjugating enzyme E2 A [KO:K10573] [EC:2.3.2.23]
103244546  UBE2B; ubiquitin conjugating enzyme E2 B [KO:K10574] [EC:2.3.2.23]
103235633  ubiquitin-conjugating enzyme E2 C-like [KO:K06688] [EC:2.3.2.23]
103215596  ubiquitin-conjugating enzyme E2 C-like [KO:K06688] [EC:2.3.2.23]
103245263  UBE2C; ubiquitin conjugating enzyme E2 C [KO:K06688] [EC:2.3.2.23]
103236056  UBE2D3; ubiquitin conjugating enzyme E2 D3 [KO:K06689] [EC:2.3.2.23]
103244643  UBE2D2; ubiquitin conjugating enzyme E2 D2 [KO:K06689] [EC:2.3.2.23]
103246235  ubiquitin-conjugating enzyme E2 D2-like [KO:K06689] [EC:2.3.2.23]
103226151  UBE2D4; ubiquitin conjugating enzyme E2 D4 (putative) [KO:K06689] [EC:2.3.2.23]
103216166  UBE2D1; ubiquitin conjugating enzyme E2 D1 [KO:K06689] [EC:2.3.2.23]
103241760  UBE2E2; ubiquitin conjugating enzyme E2 E2 [KO:K20217] [EC:2.3.2.23]
103241761  UBE2E1; ubiquitin conjugating enzyme E2 E1 [KO:K20217] [EC:2.3.2.23]
103217444  UBE2E3; ubiquitin conjugating enzyme E2 E3 [KO:K20217] [EC:2.3.2.23]
103218168  UBE2F; ubiquitin conjugating enzyme E2 F (putative) [KO:K10687] [EC:2.3.2.34]
103242182  UBE2G1; ubiquitin conjugating enzyme E2 G1 [KO:K10575] [EC:2.3.2.23]
103219984  UBE2G2; ubiquitin conjugating enzyme E2 G2 [KO:K04555] [EC:2.3.2.23]
103226887  UBE2H; ubiquitin conjugating enzyme E2 H [KO:K10576] [EC:2.3.2.23]
103225983  UBE2I; ubiquitin conjugating enzyme E2 I [KO:K10577]
103240101  UBE2J1; ubiquitin conjugating enzyme E2 J1 [KO:K10578] [EC:2.3.2.23]
103225813  UBE2J2; ubiquitin conjugating enzyme E2 J2 [KO:K04554] [EC:2.3.2.23]
103246197  UBE2K; ubiquitin conjugating enzyme E2 K [KO:K04649] [EC:2.3.2.23]
103222946  UBE2L3; ubiquitin conjugating enzyme E2 L3 [KO:K04552] [EC:2.3.2.23]
103235390  UBE2L6; ubiquitin conjugating enzyme E2 L6 [KO:K04553] [EC:2.3.2.23]
103235466  UBE2M; ubiquitin conjugating enzyme E2 M [KO:K10579] [EC:2.3.2.34]
103232698  ubiquitin-conjugating enzyme E2 N-like [KO:K10580] [EC:2.3.2.23]
103233100  ubiquitin-conjugating enzyme E2 N-like [KO:K10580] [EC:2.3.2.23]
103233237  ubiquitin-conjugating enzyme E2 N-like [KO:K10580] [EC:2.3.2.23]
103238868  UBE2N; ubiquitin conjugating enzyme E2 N [KO:K10580] [EC:2.3.2.23]
103236528  ubiquitin-conjugating enzyme E2 N-like [KO:K10580] [EC:2.3.2.23]
103242990  UBE2O; ubiquitin conjugating enzyme E2 O [KO:K10581] [EC:2.3.2.24]
103223923  UBE2Q1; ubiquitin conjugating enzyme E2 Q1 [KO:K10582] [EC:2.3.2.23]
103245286  UBE2Q2; ubiquitin conjugating enzyme E2 Q2 [KO:K10582] [EC:2.3.2.23]
103214968  UBE2QL1; ubiquitin conjugating enzyme E2 Q family like 1 [KO:K10582] [EC:2.3.2.23]
103233587  CDC34; cell division cycle 34 [KO:K02207] [EC:2.3.2.23]
103219280  UBE2R2; ubiquitin conjugating enzyme E2 R2 [KO:K02207] [EC:2.3.2.23]
103235313  UBE2S; ubiquitin conjugating enzyme E2 S [KO:K10583] [EC:2.3.2.23]
103224685  UBE2U; ubiquitin conjugating enzyme E2 U (putative) [KO:K10584] [EC:2.3.2.23]
103236976  UBE2W; ubiquitin conjugating enzyme E2 W [KO:K10688] [EC:2.3.2.23 2.3.2.25]
103243631  UBE2Z; ubiquitin conjugating enzyme E2 Z [KO:K10585] [EC:2.3.2.23]
103220526  BIRC6; baculoviral IAP repeat containing 6 [KO:K10586] [EC:2.3.2.23]
103246026  UBE3A; ubiquitin protein ligase E3A [KO:K10587] [EC:2.3.2.26]
103239087  UBE3B; ubiquitin protein ligase E3B [KO:K10588] [EC:2.3.2.26]
103227304  UBE3C; ubiquitin protein ligase E3C [KO:K10589] [EC:2.3.2.26]
103246792  SMURF1; SMAD specific E3 ubiquitin protein ligase 1 [KO:K04678] [EC:2.3.2.26]
103243842  SMURF2; SMAD specific E3 ubiquitin protein ligase 2 [KO:K04678] [EC:2.3.2.26]
103248756  ITCH; itchy E3 ubiquitin protein ligase [KO:K05632] [EC:2.3.2.26]
103237079  WWP1; WW domain containing E3 ubiquitin protein ligase 1 [KO:K05633] [EC:2.3.2.26]
103233208  WWP2; WW domain containing E3 ubiquitin protein ligase 2 [KO:K05630] [EC:2.3.2.26]
103218026  TRIP12; thyroid hormone receptor interactor 12 [KO:K10590] [EC:2.3.2.26]
103245581  NEDD4; neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase [KO:K10591] [EC:2.3.2.26]
103244214  NEDD4L; neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase [KO:K13305] [EC:2.3.2.26]
103232019  HUWE1; HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase [KO:K10592] [EC:2.3.2.26]
103237239  UBR5; ubiquitin protein ligase E3 component n-recognin 5 [KO:K10593] [EC:2.3.2.26]
103245503  HERC1; HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 [KO:K10594] [EC:2.3.2.26]
103245991  HERC2; HECT and RLD domain containing E3 ubiquitin protein ligase 2 [KO:K10595] [EC:2.3.2.26]
103235960  HERC3; HECT and RLD domain containing E3 ubiquitin protein ligase 3 [KO:K10614] [EC:2.3.2.26]
103216102  HERC4; HECT and RLD domain containing E3 ubiquitin protein ligase 4 [KO:K10615] [EC:2.3.2.26]
103248589  UBE4A; ubiquitination factor E4A [KO:K10596] [EC:2.3.2.27]
103225984  UBE4B; ubiquitination factor E4B [KO:K10597] [EC:2.3.2.27]
103225621  STUB1; STIP1 homology and U-box containing protein 1 [KO:K09561] [EC:2.3.2.27]
103223599  PPIL2; peptidylprolyl isomerase like 2 [KO:K10598] [EC:5.2.1.8]
103234589  PRPF19; pre-mRNA processing factor 19 [KO:K10599] [EC:2.3.2.27]
103247189  UBOX5; U-box domain containing 5 [KO:K10600]
103238687  MDM2; MDM2 proto-oncogene [KO:K06643] [EC:2.3.2.27]
103248629  CBL; Cbl proto-oncogene [KO:K04707] [EC:2.3.2.27]
103228406  CBLB; Cbl proto-oncogene B [KO:K22517] [EC:2.3.2.27]
103234836  CBLC; Cbl proto-oncogene C [KO:K22518] [EC:2.3.2.27]
103240862  PARK2; parkin RBR E3 ubiquitin protein ligase [KO:K04556] [EC:2.3.2.31]
103232443  SIAH1; siah E3 ubiquitin protein ligase 1 [KO:K04506] [EC:2.3.2.27]
103231785  E3 ubiquitin-protein ligase SIAH1-like [KO:K04506] [EC:2.3.2.27]
103245348  PML; promyelocytic leukemia [KO:K10054] [EC:2.3.2.-]
103237554  TRAF6; TNF receptor associated factor 6 [KO:K03175] [EC:2.3.2.27]
103221701  MAP3K1; mitogen-activated protein kinase kinase kinase 1 [KO:K04416] [EC:2.7.11.25]
103230543  RFWD2; ring finger and WD repeat domain 2 [KO:K10143] [EC:2.3.2.27]
103235812  RCHY1; ring finger and CHY zinc finger domain containing 1 [KO:K10144] [EC:2.3.2.27]
103248332  BIRC3; baculoviral IAP repeat containing 3 [KO:K16060]
103248333  BIRC2; baculoviral IAP repeat containing 2 [KO:K16060]
103247375  XIAP; X-linked inhibitor of apoptosis [KO:K04725] [EC:2.3.2.27]
103242845  BIRC7; baculoviral IAP repeat containing 7 [KO:K16061]
103245425  PIAS1; protein inhibitor of activated STAT 1 [KO:K04706] [EC:2.3.2.-]
103222464  PIAS2; protein inhibitor of activated STAT 2 [KO:K16063] [EC:2.3.2.-]
103224069  PIAS3; protein inhibitor of activated STAT 3 [KO:K16064] [EC:2.3.2.-]
103234330  PIAS4; protein inhibitor of activated STAT 4 [KO:K16065] [EC:2.3.2.27]
103230099  SYVN1; synoviolin 1 [KO:K10601] [EC:2.3.2.27]
103222105  NHLRC1; NHL repeat containing E3 ubiquitin protein ligase 1 [KO:K10602] [EC:2.3.2.27]
103219766  AIRE; autoimmune regulator [KO:K10603]
103227696  MGRN1; mahogunin ring finger 1 [KO:K10604] [EC:2.3.2.27]
103243855  BRCA1; BRCA1, DNA repair associated [KO:K10605] [EC:2.3.2.27]
103220221  FANCL; Fanconi anemia complementation group L [KO:K10606] [EC:2.3.2.27]
103231585  MID1; midline 1 [KO:K08285] [EC:2.3.2.27]
103218942  TRIM32; tripartite motif containing 32 [KO:K10607] [EC:2.3.2.27]
103242834  TRIM37; tripartite motif containing 37 [KO:K10608] [EC:2.3.2.27]
103223367  RBX1; ring-box 1 [KO:K03868] [EC:2.3.2.32]
103227180  CUL1; cullin 1 [KO:K03347]
103244544  SKP1; S-phase kinase associated protein 1 [KO:K03094]
103216409  BTRC; beta-transducin repeat containing E3 ubiquitin protein ligase [KO:K03362]
103244971  FBXW11; F-box and WD repeat domain containing 11 [KO:K03362]
103215131  SKP2; S-phase kinase associated protein 2 [KO:K03875]
103236395  FBXW7; F-box and WD repeat domain containing 7 [KO:K10260]
103225605  FBXO2; F-box protein 2 [KO:K10099]
103215194  FBXO4; F-box protein 4 [KO:K10291]
103238109  CUL2; cullin 2 [KO:K03870]
103236978  ELOC; elongin C [KO:K03872]
103226961  ELOB; elongin B [KO:K03873]
103218574  transcription elongation factor B polypeptide 2 [KO:K03873]
103227999  VHL; von Hippel-Lindau tumor suppressor [KO:K03871]
103223849  VHLL; von Hippel-Lindau tumor suppressor like [KO:K03871]
103217971  CUL3; cullin 3 [KO:K03869]
103233900  KEAP1; kelch like ECH associated protein 1 [KO:K10456]
103247411  KLHL13; kelch like family member 13 [KO:K10447]
103219374  KLHL9; kelch like family member 9 [KO:K10447]
103216144  RHOBTB1; Rho related BTB domain containing 1 [KO:K07868]
103215466  RHOBTB2; Rho related BTB domain containing 2 [KO:K07868]
103247359  CUL4B; cullin 4B [KO:K10609]
103214836  CUL4A; cullin 4A [KO:K10609]
103234463  DDB1; damage specific DNA binding protein 1 [KO:K10610]
103236219  DDB2; damage specific DNA binding protein 2 [KO:K10140]
103222012  ERCC8; ERCC excision repair 8, CSA ubiquitin ligase complex subunit [KO:K10570]
103231132  DET1; de-etiolated homolog 1 (Arabidopsis) [KO:K10571]
103241565  RNF7; ring finger protein 7 [KO:K10611]
103248397  CUL5; cullin 5 [KO:K10612]
103228298  SOCS1; suppressor of cytokine signaling 1 [KO:K04694]
103243658  SOCS3; suppressor of cytokine signaling 3 [KO:K04696]
103221475  CUL7; cullin 7 [KO:K10613]
103239212  FBXW8; F-box and WD repeat domain containing 8 [KO:K10264]
103243735  ANAPC11; anaphase promoting complex subunit 11 [KO:K03358]
103239578  ANAPC2; anaphase promoting complex subunit 2 [KO:K03349]
103224971  CDC20; cell division cycle 20 [KO:K03363]
103233682  FZR1; fizzy/cell division cycle 20 related 1 [KO:K03364]
103241259  ANAPC1; anaphase promoting complex subunit 1 [KO:K03348]
103243273  CDC27; cell division cycle 27 [KO:K03350]
103246266  ANAPC4; anaphase promoting complex subunit 4 [KO:K03351]
103239279  ANAPC5; anaphase promoting complex subunit 5 [KO:K03352]
103214862  CDC16; cell division cycle 16 [KO:K03353]
103239524  ANAPC7; anaphase promoting complex subunit 7 [KO:K03354]
103244615  CDC23; cell division cycle 23 [KO:K03355]
103236325  ANAPC10; anaphase promoting complex subunit 10 [KO:K03357]
103218996  CDC26; cell division cycle 26 [KO:K03359]
103241635  ANAPC13; anaphase promoting complex subunit 13 [KO:K12456]
103247989  ANAPC15; anaphase promoting complex subunit 15 [KO:K25228]
103216030  ANAPC16; anaphase promoting complex subunit 16 [KO:K25229]
Reference
  Authors
Kamura T.
  Title
[Cullin-based E3 family]
  Journal
Tanpakushitsu Kakusan Koso 51:1167-72 (2006)
Reference
  Authors
Matsuda N.
  Title
[Overview: hereditary disorders caused by dysfunction of ubiquitylation]
  Journal
Tanpakushitsu Kakusan Koso 51:1402-7 (2006)
Reference
  Authors
Tokunaga F.
  Title
[E2 ubiquitin-conjugating enzymes: structures and functions]
  Journal
Tanpakushitsu Kakusan Koso 51:1150-6 (2006)
Reference
  Authors
Nalepa G, Rolfe M, Harper JW.
  Title
Drug discovery in the ubiquitin-proteasome system.
  Journal
Nat Rev Drug Discov 5:596-613 (2006)
DOI:10.1038/nrd2056
Reference
  Authors
Hsu YJ, Goodman SR.
  Title
Spectrin and ubiquitination: a review.
  Journal
Cell Mol Biol (Noisy-le-grand) Suppl 51:OL801-7 (2005)
Reference
  Authors
Hatakeyama S, Nakayama KI.
  Title
Ubiquitylation as a quality control system for intracellular proteins.
  Journal
J Biochem 134:1-8 (2003)
DOI:10.1093/jb/mvg106
Reference
  Authors
Lee J, Zhou P.
  Title
DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase.
  Journal
Mol Cell 26:775-80 (2007)
DOI:10.1016/j.molcel.2007.06.001
Related
pathway
csab03050  Proteasome
KO pathway
ko04120   
LinkDB

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