KEGG   PATHWAY: maua04120
Entry
maua04120                   Pathway                                
Name
Ubiquitin mediated proteolysis - Mesocricetus auratus (golden hamster)
Description
Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
maua04120  Ubiquitin mediated proteolysis
maua04120

Other DBs
GO: 0016567
Organism
Mesocricetus auratus (golden hamster) [GN:maua]
Gene
101822384  Uba3; NEDD8-activating enzyme E1 catalytic subunit isoform X1 [KO:K10686] [EC:6.2.1.64]
101822568  Rhobtb2; rho-related BTB domain-containing protein 2 [KO:K07868]
101822649  Ube2o; (E3-independent) E2 ubiquitin-conjugating enzyme isoform X1 [KO:K10581] [EC:2.3.2.24]
101822740  Pml; protein PML isoform X1 [KO:K10054] [EC:2.3.2.-]
101822848  Birc7; baculoviral IAP repeat-containing protein 7 [KO:K16061]
101822924  Rps27a; ubiquitin-40S ribosomal protein S27a [KO:K02977]
101823019  [KO:K02927]
101823452  Uba6; ubiquitin-like modifier-activating enzyme 6 [KO:K10699] [EC:6.2.1.45]
101823495  Mgrn1; E3 ubiquitin-protein ligase MGRN1 isoform X6 [KO:K10604] [EC:2.3.2.27]
101823664  Ube2r2; ubiquitin-conjugating enzyme E2 R2 isoform X1 [KO:K02207] [EC:2.3.2.23]
101824065  Anapc1; anaphase-promoting complex subunit 1 [KO:K03348]
101824322  Cul1; cullin-1 [KO:K03347]
101824600  Ube2b; ubiquitin-conjugating enzyme E2 B [KO:K10574] [EC:2.3.2.23]
101824629  Ube2l3; ubiquitin-conjugating enzyme E2 L3 isoform X1 [KO:K04552] [EC:2.3.2.23]
101824803  [KO:K04725] [EC:2.3.2.27]
101824845  Ube2ql1; ubiquitin-conjugating enzyme E2Q-like protein 1 [KO:K10582] [EC:2.3.2.23]
101824980  Ube3b; LOW QUALITY PROTEIN: ubiquitin-protein ligase E3B [KO:K10588] [EC:2.3.2.26]
101825062  Klhl9; kelch-like protein 9 [KO:K10447]
101825108  Prkn; E3 ubiquitin-protein ligase parkin isoform X1 [KO:K04556] [EC:2.3.2.31]
101825488  Herc3; probable E3 ubiquitin-protein ligase HERC3 isoform X1 [KO:K10614] [EC:2.3.2.26]
101825597  Ube2q1; ubiquitin-conjugating enzyme E2 Q1 [KO:K10582] [EC:2.3.2.23]
101826106  Cblb; E3 ubiquitin-protein ligase CBL-B isoform X1 [KO:K22517] [EC:2.3.2.27]
101826197  [KO:K06689] [EC:2.3.2.23]
101826230  Ercc8; DNA excision repair protein ERCC-8 isoform X1 [KO:K10570]
101826303  Ube2a; ubiquitin-conjugating enzyme E2 A isoform X1 [KO:K10573] [EC:2.3.2.23]
101826455  Uba7; ubiquitin-like modifier-activating enzyme 7 isoform X1 [KO:K10698] [EC:6.2.1.45]
101826876  Fancl; E3 ubiquitin-protein ligase FANCL isoform X1 [KO:K10606] [EC:2.3.2.27]
101826922  Cdc20; cell division cycle protein 20 homolog [KO:K03363]
101826943  Vhl; von Hippel-Lindau disease tumor suppressor [KO:K03871]
101827208  Sae1; SUMO-activating enzyme subunit 1 isoform X1 [KO:K10684] [EC:6.2.1.45]
101827280  [KO:K06689] [EC:2.3.2.23]
101827375  Uba1; ubiquitin-like modifier-activating enzyme 1 [KO:K03178] [EC:6.2.1.45]
101827413  Birc6; baculoviral IAP repeat-containing protein 6 isoform X1 [KO:K10586] [EC:2.3.2.23]
101827443  Uba2; SUMO-activating enzyme subunit 2 isoform X1 [KO:K10685] [EC:6.2.1.45]
101827454  Socs1; suppressor of cytokine signaling 1 [KO:K04694]
101827554  Fbxo4; F-box only protein 4 isoform X1 [KO:K10291]
101827577  Cbl; LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBL [KO:K04707] [EC:2.3.2.27]
101827580  Socs3; suppressor of cytokine signaling 3 [KO:K04696]
101827592  Nedd4l; E3 ubiquitin-protein ligase NEDD4-like isoform X1 [KO:K13305] [EC:2.3.2.26]
101828025  Ube2z; ubiquitin-conjugating enzyme E2 Z [KO:K10585] [EC:2.3.2.23]
101828312  [KO:K06689] [EC:2.3.2.23]
101828313  Klhl13; kelch-like protein 13 isoform X4 [KO:K10447]
101828447  Ube2d1; ubiquitin-conjugating enzyme E2 D1 isoform X2 [KO:K06689] [EC:2.3.2.23]
101828825  Anapc10; anaphase-promoting complex subunit 10 [KO:K03357]
101828845  Anapc2; anaphase-promoting complex subunit 2 [KO:K03349]
101828883  Ube2g1; ubiquitin-conjugating enzyme E2 G1 [KO:K10575] [EC:2.3.2.23]
101829390  Cdc23; cell division cycle protein 23 homolog [KO:K03355]
101829633  Ube4b; ubiquitin conjugation factor E4 B isoform X1 [KO:K10597] [EC:2.3.2.27]
101829742  Cul4b; cullin-4B isoform X1 [KO:K10609]
101830029  Ube2e3; ubiquitin-conjugating enzyme E2 E3 [KO:K20217] [EC:2.3.2.23]
101830549  Cul3; cullin-3 isoform X1 [KO:K03869]
101830563  Traf6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
101830733  Ube3c; ubiquitin-protein ligase E3C [KO:K10589] [EC:2.3.2.26]
101830776  Aire; autoimmune regulator isoform X1 [KO:K10603]
101830914  Itch; E3 ubiquitin-protein ligase Itchy homolog [KO:K05632] [EC:2.3.2.26]
101831342  Rnf7; RING-box protein 2 isoform X1 [KO:K10611]
101831395  Smurf2; E3 ubiquitin-protein ligase SMURF2 [KO:K04678] [EC:2.3.2.26]
101831582  [KO:K02207] [EC:2.3.2.23]
101831870  Keap1; kelch-like ECH-associated protein 1 [KO:K10456]
101831932  Fbxw11; F-box/WD repeat-containing protein 11 isoform X2 [KO:K03362]
101832017  Rhobtb1; rho-related BTB domain-containing protein 1 isoform X1 [KO:K07868]
101832155  Uba52; ubiquitin-60S ribosomal protein L40 [KO:K02927]
101832496  Btrc; F-box/WD repeat-containing protein 1A isoform X2 [KO:K03362]
101833011  Mdm2; E3 ubiquitin-protein ligase Mdm2 [KO:K06643] [EC:2.3.2.27]
101833214  Ube2d4; ubiquitin-conjugating enzyme E2 D4 isoform X3 [KO:K06689] [EC:2.3.2.23]
101833451  Herc2; E3 ubiquitin-protein ligase HERC2 isoform X1 [KO:K10595] [EC:2.3.2.26]
101833696  Ube2j2; ubiquitin-conjugating enzyme E2 J2 [KO:K04554] [EC:2.3.2.23]
101833960  Ube3a; ubiquitin-protein ligase E3A isoform X1 [KO:K10587] [EC:2.3.2.26]
101833974  Ube2d2; ubiquitin-conjugating enzyme E2 D2 isoform X2 [KO:K06689] [EC:2.3.2.23]
101834194  Pias1; E3 SUMO-protein ligase PIAS1 isoform X3 [KO:K04706] [EC:2.3.2.-]
101834411  Cul2; cullin-2 [KO:K03870]
101834879  Syvn1; E3 ubiquitin-protein ligase synoviolin [KO:K10601] [EC:2.3.2.27]
101835048  Ube2n; ubiquitin-conjugating enzyme E2 N [KO:K10580] [EC:2.3.2.23]
101835061  Cdc27; cell division cycle protein 27 homolog isoform X1 [KO:K03350]
101835155  Ube2g2; ubiquitin-conjugating enzyme E2 G2 [KO:K04555] [EC:2.3.2.23]
101835389  Ube2w; ubiquitin-conjugating enzyme E2 W [KO:K10688] [EC:2.3.2.23 2.3.2.25]
101835419  [KO:K10580] [EC:2.3.2.23]
101835694  Birc2; baculoviral IAP repeat-containing protein 2 [KO:K16060]
101835747  Rchy1; RING finger and CHY zinc finger domain-containing protein 1 [KO:K10144] [EC:2.3.2.27]
101836099  Ube4a; ubiquitin conjugation factor E4 A [KO:K10596] [EC:2.3.2.27]
101836114  Mid1; E3 ubiquitin-protein ligase Midline-1 isoform X1 [KO:K08285] [EC:2.3.2.27]
101836138  Ube2f; NEDD8-conjugating enzyme UBE2F isoform X1 [KO:K10687] [EC:2.3.2.34]
101836454  Ube2k; ubiquitin-conjugating enzyme E2 K isoform X1 [KO:K04649] [EC:2.3.2.23]
101836468  Fbxo2; F-box only protein 2 [KO:K10099]
101836919  Ube2e2; ubiquitin-conjugating enzyme E2 E2 [KO:K20217] [EC:2.3.2.23]
101837183  Ube2e1; ubiquitin-conjugating enzyme E2 E1 [KO:K20217] [EC:2.3.2.23]
101837227  [KO:K03094]
101837346  Ppil2; RING-type E3 ubiquitin-protein ligase PPIL2 [KO:K10598] [EC:5.2.1.8]
101837348  Skp2; S-phase kinase-associated protein 2 isoform X1 [KO:K03875]
101837640  Prpf19; pre-mRNA-processing factor 19 isoform X1 [KO:K10599] [EC:2.3.2.27]
101837889  Fbxw8; F-box/WD repeat-containing protein 8 [KO:K10264]
101837915  Huwe1; E3 ubiquitin-protein ligase HUWE1 isoform X12 [KO:K10592] [EC:2.3.2.26]
101837978  Trim37; E3 ubiquitin-protein ligase TRIM37 isoform X1 [KO:K10608] [EC:2.3.2.27]
101838028  Rbx1; E3 ubiquitin-protein ligase RBX1 [KO:K03868] [EC:2.3.2.32]
101838046  Herc4; probable E3 ubiquitin-protein ligase HERC4 isoform X1 [KO:K10615] [EC:2.3.2.26]
101838251  Smurf1; E3 ubiquitin-protein ligase SMURF1 isoform X1 [KO:K04678] [EC:2.3.2.26]
101838494  Trim32; E3 ubiquitin-protein ligase TRIM32 [KO:K10607] [EC:2.3.2.27]
101838652  Cul5; cullin-5 isoform X1 [KO:K10612]
101838795  Cdc16; cell division cycle protein 16 homolog isoform X1 [KO:K03353]
101838958  Trip12; E3 ubiquitin-protein ligase TRIP12 isoform X1 [KO:K10590] [EC:2.3.2.26]
101839240  Pias3; E3 SUMO-protein ligase PIAS3 isoform X1 [KO:K16064] [EC:2.3.2.-]
101839610  Ube2s; ubiquitin-conjugating enzyme E2 S [KO:K10583] [EC:2.3.2.23]
101839765  Ube2d3; ubiquitin-conjugating enzyme E2 D3 isoform X2 [KO:K06689] [EC:2.3.2.23]
101840126  Anapc5; anaphase-promoting complex subunit 5 isoform X1 [KO:K03352]
101840369  Wwp2; NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1 [KO:K05630] [EC:2.3.2.26]
101840396  Fbxw7; F-box/WD repeat-containing protein 7 isoform X2 [KO:K10260]
101840593  Ddb1; DNA damage-binding protein 1 [KO:K10610]
101840606  Cblc; LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBL-C [KO:K22518] [EC:2.3.2.27]
101840652  Cul4a; cullin-4A [KO:K10609]
101840684  Stub1; E3 ubiquitin-protein ligase CHIP isoform X1 [KO:K09561] [EC:2.3.2.27]
101840804  Cop1; E3 ubiquitin-protein ligase COP1 isoform X1 [KO:K10143] [EC:2.3.2.27]
101840909  Brca1; breast cancer type 1 susceptibility protein isoform X1 [KO:K10605] [EC:2.3.2.27]
101841335  Ube2q2; ubiquitin-conjugating enzyme E2 Q2 isoform X1 [KO:K10582] [EC:2.3.2.23]
101841351  Nedd4; E3 ubiquitin-protein ligase NEDD4 isoform X1 [KO:K10591] [EC:2.3.2.26]
101841393  Fzr1; fizzy-related protein homolog [KO:K03364]
101841482  Anapc7; anaphase-promoting complex subunit 7 isoform X1 [KO:K03354]
101841717  Ubr5; E3 ubiquitin-protein ligase UBR5 isoform X6 [KO:K10593] [EC:2.3.2.26]
101841726  Cdc26; anaphase-promoting complex subunit CDC26 [KO:K03359]
101841736  Ube2h; ubiquitin-conjugating enzyme E2 H isoform X1 [KO:K10576] [EC:2.3.2.23]
101842233  [KO:K10582] [EC:2.3.2.23]
101842261  Herc1; probable E3 ubiquitin-protein ligase HERC1 isoform X1 [KO:K10594] [EC:2.3.2.26]
101842605  Anapc16; anaphase-promoting complex subunit 16 isoform X1 [KO:K25229]
101842616  Anapc15; anaphase-promoting complex subunit 15 isoform X1 [KO:K25228]
101842811  Siah1; E3 ubiquitin-protein ligase SIAH1 isoform X1 [KO:K04506] [EC:2.3.2.27]
101843009  Map3k1; LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 1 [KO:K04416] [EC:2.7.11.25]
101843127  Anapc4; anaphase-promoting complex subunit 4 isoform X3 [KO:K03351]
101843247  Ube2i; SUMO-conjugating enzyme UBC9 [KO:K10577]
101843414  Pias2; E3 SUMO-protein ligase PIAS2 isoform X1 [KO:K16063] [EC:2.3.2.-]
101843456  Wwp1; NEDD4-like E3 ubiquitin-protein ligase WWP1 isoform X1 [KO:K05633] [EC:2.3.2.26]
101843836  Ube2m; NEDD8-conjugating enzyme Ubc12 [KO:K10579] [EC:2.3.2.34]
101843985  Ddb2; DNA damage-binding protein 2 isoform X1 [KO:K10140]
101844153  Cdc34; ubiquitin-conjugating enzyme E2 R1 isoform X1 [KO:K02207] [EC:2.3.2.23]
101844338  Ube2l6; ubiquitin/ISG15-conjugating enzyme E2 L6 [KO:K04553] [EC:2.3.2.23]
101844418  [KO:K12456]
101844536  Ubox5; RING finger protein 37 isoform X1 [KO:K10600]
101844579  Det1; DET1 homolog [KO:K10571]
101844765  Pias4; E3 SUMO-protein ligase PIAS4 isoform X2 [KO:K16065] [EC:2.3.2.27]
101844816  Cul7; cullin-7 isoform X1 [KO:K10613]
106020901  Ubb; polyubiquitin-B [KO:K08770]
106021115  [KO:K03872]
106021119  Anapc11; anaphase-promoting complex subunit 11 isoform X1 [KO:K03358]
106021421  [KO:K10582] [EC:2.3.2.23]
106021984  Ubc; polyubiquitin-C [KO:K08770]
106022079  Elob; elongin-B [KO:K03873]
110339381  Ube2u; ubiquitin-conjugating enzyme E2 U isoform X1 [KO:K10584] [EC:2.3.2.23]
110339912  [KO:K16060]
110340216  Nhlrc1; E3 ubiquitin-protein ligase NHLRC1 [KO:K10602] [EC:2.3.2.27]
110340475  Skp1; S-phase kinase-associated protein 1 [KO:K03094]
110340959  [KO:K09561] [EC:2.3.2.27]
110342892  Ube2j1; ubiquitin-conjugating enzyme E2 J1 isoform X1 [KO:K10578] [EC:2.3.2.23]
121133135  [KO:K03094]
121134106  [KO:K06643] [EC:2.3.2.27]
121134448  Ube2c; ubiquitin-conjugating enzyme E2 C [KO:K06688] [EC:2.3.2.23]
121137064  [KO:K03873]
121137479  Anapc13; anaphase-promoting complex subunit 13 [KO:K12456]
121137482  [KO:K03094]
121138689  [KO:K03357]
121138763  Eloc; elongin-C [KO:K03872]
121139105  [KO:K02977]
121139832  [KO:K06689] [EC:2.3.2.23]
121139999  [KO:K04506] [EC:2.3.2.27]
121140845  [KO:K20217] [EC:2.3.2.23]
121144468  [KO:K10580] [EC:2.3.2.23]
Reference
  Authors
Kamura T.
  Title
[Cullin-based E3 family]
  Journal
Tanpakushitsu Kakusan Koso 51:1167-72 (2006)
Reference
  Authors
Matsuda N.
  Title
[Overview: hereditary disorders caused by dysfunction of ubiquitylation]
  Journal
Tanpakushitsu Kakusan Koso 51:1402-7 (2006)
Reference
  Authors
Tokunaga F.
  Title
[E2 ubiquitin-conjugating enzymes: structures and functions]
  Journal
Tanpakushitsu Kakusan Koso 51:1150-6 (2006)
Reference
  Authors
Nalepa G, Rolfe M, Harper JW.
  Title
Drug discovery in the ubiquitin-proteasome system.
  Journal
Nat Rev Drug Discov 5:596-613 (2006)
DOI:10.1038/nrd2056
Reference
  Authors
Hsu YJ, Goodman SR.
  Title
Spectrin and ubiquitination: a review.
  Journal
Cell Mol Biol (Noisy-le-grand) Suppl 51:OL801-7 (2005)
Reference
  Authors
Hatakeyama S, Nakayama KI.
  Title
Ubiquitylation as a quality control system for intracellular proteins.
  Journal
J Biochem 134:1-8 (2003)
DOI:10.1093/jb/mvg106
Reference
  Authors
Lee J, Zhou P.
  Title
DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase.
  Journal
Mol Cell 26:775-80 (2007)
DOI:10.1016/j.molcel.2007.06.001
Related
pathway
maua03050  Proteasome
KO pathway
ko04120   

DBGET integrated database retrieval system