Entry
Name
Endocytosis - Moschus berezovskii (Chinese forest musk deer)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Moschus berezovskii (Chinese forest musk deer) [GN:
mbez ]
Gene
129558058 ZFYVE16; zinc finger FYVE domain-containing protein 16 [KO:K04679 ]
129549831 SMAD2; mothers against decapentaplegic homolog 2 isoform X1 [KO:K04500 ]
129562707 SMAD3; mothers against decapentaplegic homolog 3 isoform X1 [KO:K23605 ]
129564323 SH3KBP1; SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
129537595 BIN1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
129559562 EPS15L1; epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
129537774 LDLRAP1; low density lipoprotein receptor adapter protein 1 isoform X1 [KO:K12474 ]
129542356 LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A-like [KO:K05757 ]
129545724 ARPC1B; actin-related protein 2/3 complex subunit 1B isoform X1 [KO:K05757 ]
129548062 ARPC4; actin-related protein 2/3 complex subunit 4 isoform X1 [KO:K05755 ]
129539125 ARPC5L; actin-related protein 2/3 complex subunit 5-like protein isoform X1 [KO:K05754 ]
129552492 WIPF3; WAS/WASL-interacting protein family member 3 isoform X1 [KO:K19475 ]
129541422 DNAJC6; putative tyrosine-protein phosphatase auxilin [KO:K09526 ]
129538451 CAPZB; F-actin-capping protein subunit beta isoform X1 [KO:K10365 ]
129542513 VPS29; vacuolar protein sorting-associated protein 29 [KO:K18467 ]
129554892 VPS26B; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
129555771 VPS26A; vacuolar protein sorting-associated protein 26A [KO:K18466 ]
129547135 VPS35; vacuolar protein sorting-associated protein 35 isoform X1 [KO:K18468 ]
129544607 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
129537765 STAM2; signal transducing adapter molecule 2 isoform X1 [KO:K04705 ]
129560250 VPS28; vacuolar protein sorting-associated protein 28 homolog [KO:K12184 ]
129548907 VPS37C; vacuolar protein sorting-associated protein 37C [KO:K12185 ]
129549345 VPS37A; vacuolar protein sorting-associated protein 37A [KO:K12185 ]
129545625 VPS37D; vacuolar protein sorting-associated protein 37D [KO:K12185 ]
129542236 VPS37B; vacuolar protein sorting-associated protein 37B [KO:K12185 ]
129556304 VPS36; vacuolar protein-sorting-associated protein 36 [KO:K12190 ]
129544443 VPS25; vacuolar protein-sorting-associated protein 25 [KO:K12189 ]
129549905 VPS4B; vacuolar protein sorting-associated protein 4B [KO:K12196 ]
129546956 VPS4A; vacuolar protein sorting-associated protein 4A [KO:K12196 ]
129561140 VTA1; vacuolar protein sorting-associated protein VTA1 homolog isoform X1 [KO:K12199 ]
129548162 PDCD6IP; programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
129560720 IGF2R; cation-independent mannose-6-phosphate receptor [KO:K06564 ]
129556783 IL2RA; interleukin-2 receptor subunit alpha isoform X1 [KO:K05068 ]
129543112 BOLA class I histocompatibility antigen, alpha chain BL3-7-like isoform X1 [KO:K06751 ]
129543113 BOLA class I histocompatibility antigen, alpha chain BL3-7 isoform X1 [KO:K06751 ]
129543114 BOLA class I histocompatibility antigen, alpha chain BL3-7-like isoform X1 [KO:K06751 ]
129543175 BOLA class I histocompatibility antigen, alpha chain BL3-7-like isoform X1 [KO:K06751 ]
129543498 BOLA class I histocompatibility antigen, alpha chain BL3-7-like [KO:K06751 ]
129558890 LOW QUALITY PROTEIN: H-2 class I histocompatibility antigen, Q10 alpha chain-like [KO:K06751 ]
129542167 RABEP1; rab GTPase-binding effector protein 1 isoform X1 [KO:K12480 ]
129555782 RUFY2; RUN and FYVE domain-containing protein 2 isoform X1 [KO:K12482 ]
129540678 VPS45; vacuolar protein sorting-associated protein 45 isoform X1 [KO:K12479 ]
129545188 RAB11FIP3; rab11 family-interacting protein 3 isoform X1 [KO:K12485 ]
129540428 RAB11FIP4; rab11 family-interacting protein 4 isoform X1 [KO:K12485 ]
129547002 PARD6A; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
129561117 SMAP1; stromal membrane-associated protein 1 isoform X1 [KO:K12486 ]
129537697 ASAP3; LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 [KO:K12488 ]
129559888 ASAP1; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12488 ]
129539916 ASAP2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
129542735 ACAP1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12489 ]
129544204 ACAP2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12489 ]
129551408 ACAP3; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12489 ]
129554638 ARAP1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
129561498 ARAP2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K18440 ]
129558724 ARAP3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
129552789 AGAP3; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
129540638 AGAP1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12491 ]
129536500 AGAP2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 [KO:K17848 ]
129561105 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1 [KO:K12492 ]
129535890 ARFGAP3; ADP-ribosylation factor GTPase-activating protein 3 [KO:K12493 ]
129554806 ARFGAP2; ADP-ribosylation factor GTPase-activating protein 2 isoform X1 [KO:K12493 ]
129549449 PSD3; PH and SEC7 domain-containing protein 3 isoform X1 [KO:K12494 ]
129539904 PSD4; PH and SEC7 domain-containing protein 4 isoform X1 [KO:K12494 ]
129536478 IQSEC3; IQ motif and SEC7 domain-containing protein 3 [KO:K12495 ]
129564551 IQSEC2; IQ motif and SEC7 domain-containing protein 2 isoform X1 [KO:K12495 ]
129547691 IQSEC1; IQ motif and SEC7 domain-containing protein 1 isoform X1 [KO:K12495 ]
129564589 ARFGEF2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1 [KO:K18442 ]
129559881 ARFGEF1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
129555408 GBF1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [KO:K18443 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
mbez04060 Cytokine-cytokine receptor interaction
mbez04070 Phosphatidylinositol signaling system
mbez04130 SNARE interactions in vesicular transport
KO pathway
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