KEGG   PATHWAY: stru03082
Entry
stru03082                   Pathway                                
Name
ATP-dependent chromatin remodeling - Salmo trutta (river trout)
Class
Genetic Information Processing; Chromosome
Pathway map
stru03082  ATP-dependent chromatin remodeling
stru03082

Organism
Salmo trutta (river trout) [GN:stru]
Gene
115191783  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [KO:K11654] [EC:5.6.2.-]
115202247  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [KO:K11654] [EC:5.6.2.-]
115162071  bromodomain adjacent to zinc finger domain protein 1A-like isoform X1 [KO:K11655]
115172353  baz1a; bromodomain adjacent to zinc finger domain protein 1A isoform X1 [KO:K11655]
115163200  tyrosine-protein kinase BAZ1B-like isoform X1 [KO:K11658]
115206145  tyrosine-protein kinase BAZ1B-like isoform X1 [KO:K11658]
115168363  bromodomain adjacent to zinc finger domain protein 2A-like isoform X1 [KO:K15224]
115166174  bromodomain adjacent to zinc finger domain protein 2A-like isoform X1 [KO:K15224]
115156073  baz2b; bromodomain adjacent to zinc finger domain protein 2B isoform X1 [KO:K26167]
115160709  bromodomain adjacent to zinc finger domain protein 2B-like isoform X1 [KO:K26167]
115174003  chromatin accessibility complex protein 1-like [KO:K11656]
115175512  chromatin accessibility complex protein 1-like [KO:K11656]
115160013  pole3; DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
115206251  remodeling and spacing factor 1-like isoform X1 [KO:K11657]
115148631  remodeling and spacing factor 1-like isoform X1 [KO:K11657]
115154119  remodeling and spacing factor 1-like [KO:K11657]
115162825  remodeling and spacing factor 1-like [KO:K11657]
115154527  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like [KO:K11727] [EC:5.6.2.-]
115149067  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [KO:K11727] [EC:5.6.2.-]
115171378  nucleosome-remodeling factor subunit BPTF-like isoform X1 [KO:K11728]
115178355  nucleosome-remodeling factor subunit BPTF-like isoform X1 [KO:K11728]
115201834  nucleosome-remodeling factor subunit BPTF-like isoform X1 [KO:K11728]
115208590  nucleosome-remodeling factor subunit BPTF-like isoform X1 [KO:K11728]
115188778  histone-binding protein RBBP7 isoform X1 [KO:K10752]
115176297  histone-binding protein RBBP4-like [KO:K10752]
115162409  histone-binding protein RBBP4 [KO:K10752]
115172688  histone-binding protein RBBP4-like isoform X1 [KO:K10752]
115154397  c19h17orf49; chromatin complexes subunit BAP18 [KO:K23406]
115148942  chromatin complexes subunit BAP18-like [KO:K23406]
115194624  chromatin complexes subunit BAP18-like isoform X1 [KO:K23406]
115198573  chromatin complexes subunit BAP18-like isoform X1 [KO:K23406]
115152229  cat eye syndrome critical region protein 2 homolog [KO:K25830]
115197431  cat eye syndrome critical region protein 2-like isoform X1 [KO:K25830]
115194293  chromodomain-helicase-DNA-binding protein 3-like isoform X1 [KO:K11642] [EC:5.6.2.-]
115198296  chromodomain-helicase-DNA-binding protein 3-like isoform X1 [KO:K11642] [EC:5.6.2.-]
115187718  chromodomain-helicase-DNA-binding protein 4-like isoform X1 [KO:K11643] [EC:5.6.2.-]
115175952  chromodomain-helicase-DNA-binding protein 4-like isoform X1 [KO:K11643] [EC:5.6.2.-]
115173514  chromodomain-helicase-DNA-binding protein 4-like isoform X1 [KO:K11643] [EC:5.6.2.-]
115174133  probable histone deacetylase 1-B [KO:K06067] [EC:3.5.1.98]
115176317  probable histone deacetylase 1-B [KO:K06067] [EC:3.5.1.98]
115162437  probable histone deacetylase 1-B [KO:K06067] [EC:3.5.1.98]
115172722  probable histone deacetylase 1-B [KO:K06067] [EC:3.5.1.98]
115194183  histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
115160163  methyl-CpG-binding domain protein 2-like [KO:K11590]
115149550  methyl-CpG-binding domain protein 2-like [KO:K11590]
115192630  methyl-CpG-binding domain protein 3-like isoform X1 [KO:K11591]
115169415  methyl-CpG-binding domain protein 3-like [KO:K11591]
115158248  methyl-CpG-binding domain protein 3-like isoform X1 [KO:K11591]
115194134  metastasis-associated protein MTA2-like isoform X1 [KO:K11660]
115162027  metastasis-associated protein MTA1-like [KO:K11660]
115172281  metastasis-associated protein MTA1-like [KO:K11660]
115156891  metastasis-associated protein MTA3-like [KO:K11660]
115201187  metastasis-associated protein MTA3-like [KO:K11660]
115198145  metastasis-associated protein MTA2-like isoform X1 [KO:K11660]
115173688  transcriptional repressor p66-beta-like isoform X1 [KO:K23194]
115169368  transcriptional repressor p66 alpha-like isoform X1 [KO:K23194]
115175784  transcriptional repressor p66-beta-like isoform X1 [KO:K23194]
115158208  transcriptional repressor p66-alpha-like isoform X1 [KO:K23194]
115176710  transcriptional repressor p66-beta-like isoform X1 [KO:K23194]
115179926  transcriptional repressor p66-beta-like isoform X1 [KO:K23194]
115157425  transcriptional repressor p66 alpha-like isoform X1 [KO:K23194]
115151802  transcriptional repressor p66-alpha-like isoform X1 [KO:K23194]
115205549  phf6; PHD finger protein 6 [KO:K23310]
115155851  uncharacterized protein LOC115155851 [KO:K23310]
115186318  uncharacterized protein LOC115186318 [KO:K23310]
115149303  cyclin-dependent kinase 2-associated protein 1-like isoform X1 [KO:K26454]
115164481  cyclin-dependent kinase 2-associated protein 1-like isoform X1 [KO:K26454]
115159248  cyclin-dependent kinase 2-associated protein 1-like [KO:K26454]
115202109  cyclin-dependent kinase 2-associated protein 2-like [KO:K26455]
115191958  cyclin-dependent kinase 2-associated protein 2-like [KO:K26455]
115171354  transcription activator BRG1-like isoform X1 [KO:K11647] [EC:5.6.2.-]
115178267  transcription activator BRG1-like isoform X1 [KO:K11647] [EC:5.6.2.-]
115147373  transcription activator BRG1 isoform X1 [KO:K11647] [EC:5.6.2.-]
115200695  probable global transcription activator SNF2L2 isoform X1 [KO:K11647] [EC:5.6.2.-]
115159988  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1 [KO:K11648]
115164681  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 [KO:K11648]
115203759  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 [KO:K11648]
115173900  SWI/SNF complex subunit SMARCC1-like [KO:K11649]
115176724  SWI/SNF complex subunit SMARCC1-like isoform X1 [KO:K11649]
115179190  SWI/SNF complex subunit SMARCC1-like isoform X1 [KO:K11649]
115150585  SWI/SNF complex subunit SMARCC2-like [KO:K11649]
115207820  SWI/SNF complex subunit SMARCC2-like isoform X1 [KO:K11649]
115161982  smarcd2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 [KO:K11650]
115154766  smarcd3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1 [KO:K11650]
115150051  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like [KO:K11650]
115207300  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 [KO:K11650]
115195756  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like isoform X1 [KO:K11650]
115171267  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 [KO:K11651]
115178335  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like [KO:K11651]
115208677  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like [KO:K11651]
115199702  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 [KO:K11651]
115188892  actin, cytoplasmic 1 [KO:K05692]
115188893  actin, cytoplasmic 1 [KO:K05692]
115157968  actin-like protein 6A [KO:K11340]
115151526  actin-like protein 6A [KO:K11340]
115154222  B-cell CLL/lymphoma 7 protein family member B-A-like [KO:K25605]
115159258  B-cell CLL/lymphoma 7 protein family member A-like isoform X1 [KO:K25605]
115163210  B-cell CLL/lymphoma 7 protein family member B-B-like [KO:K25605]
115164485  B-cell CLL/lymphoma 7 protein family member A-like [KO:K25605]
115148258  B-cell CLL/lymphoma 7 protein family member A-like [KO:K25605]
115148754  B-cell CLL/lymphoma 7 protein family member B-A-like [KO:K25605]
115206156  B-cell CLL/lymphoma 7 protein family member B-B-like [KO:K25605]
115200155  bcl7a; B-cell CLL/lymphoma 7 protein family member A isoform X1 [KO:K25605]
115168379  calcium-responsive transactivator-like isoform X1 [KO:K15623]
115169655  protein SSXT-like isoform X1 [KO:K15623]
115166157  calcium-responsive transactivator-like isoform X1 [KO:K15623]
115157115  protein SSXT-like isoform X1 [KO:K15623]
115173747  AT-rich interactive domain-containing protein 1A-like isoform X1 [KO:K11653]
115184560  AT-rich interactive domain-containing protein 1A-like isoform X1 [KO:K11653]
115174973  AT-rich interactive domain-containing protein 1B-like isoform X1 [KO:K11653]
115175474  AT-rich interactive domain-containing protein 1A-like isoform X1 [KO:K11653]
115162467  AT-rich interactive domain-containing protein 1B-like isoform X1 [KO:K11653]
115172096  AT-rich interactive domain-containing protein 1B-like [KO:K11653]
115194902  AT-rich interactive domain-containing protein 1B-like isoform X1 [KO:K11653]
115184029  zinc finger protein DPF3-like [KO:K22198]
115162354  zinc finger protein DPF3-like isoform X1 [KO:K22198]
115155006  zinc finger protein DPF3-like isoform X1 [KO:K22198]
115163148  zinc finger protein neuro-d4-like [KO:K22198]
115172636  zinc finger protein DPF3-like [KO:K22198]
115206101  zinc finger protein neuro-d4-like isoform X1 [KO:K22198]
115168607  zinc finger protein ubi-d4-like [KO:K13196]
115154708  zinc finger protein ubi-d4-like isoform X1 [KO:K13196]
115204316  zinc finger protein ubi-d4-like isoform X1 [KO:K13196]
115205592  zinc finger protein ubi-d4-like [KO:K13196]
115180322  AT-rich interactive domain-containing protein 2-like isoform X1 [KO:K11765]
115199031  AT-rich interactive domain-containing protein 2-like isoform X1 [KO:K11765]
115150329  protein polybromo-1-like isoform X1 [KO:K11757]
115207898  pbrm1; LOW QUALITY PROTEIN: protein polybromo-1 [KO:K11757]
115208098  protein polybromo-1-like isoform X1 [KO:K11757]
115167033  brd7; bromodomain-containing protein 7 [KO:K11723]
115203288  bromodomain-containing protein 7-like [KO:K11723]
115152862  PHD finger protein 10-like [KO:K22197]
115201466  PHD finger protein 10 [KO:K22197]
115187605  bromodomain-containing protein 9-like isoform X1 [KO:K22184]
115187606  bromodomain-containing protein 9-like isoform X1 [KO:K22184]
115163941  BRD4-interacting chromatin-remodeling complex-associated protein-like [KO:K25612]
115206880  BRD4-interacting chromatin-remodeling complex-associated protein-like [KO:K25612]
115156634  BRD4-interacting chromatin-remodeling complex-associated protein-like [KO:K25613]
115201222  BRD4-interacting chromatin-remodeling complex-associated protein-like isoform X1 [KO:K25613]
115154476  ino80; chromatin-remodeling ATPase INO80 [KO:K11665] [EC:5.6.2.-]
115194452  INO80 complex subunit B-like isoform X1 [KO:K11666]
115198440  LOW QUALITY PROTEIN: INO80 complex subunit B-like [KO:K11666]
115184356  INO80 complex subunit C-like [KO:K11667]
115176758  INO80 complex subunit C-like [KO:K11667]
115155493  INO80 complex subunit D-like isoform X1 [KO:K11668]
115160799  ino80d; INO80 complex subunit D [KO:K11668]
115180725  ino80e; INO80 complex subunit E isoform X1 [KO:K11669]
115189079  TCF3 fusion partner homolog isoform X1 [KO:K11670]
115177117  TCF3 fusion partner homolog isoform X1 [KO:K11670]
115154731  nuclear factor related to kappa-B-binding protein-like isoform X1 [KO:K11671]
115204349  nuclear factor related to kappa-B-binding protein-like isoform X1 [KO:K11671]
115207956  microspherule protein 1-like isoform X1 [KO:K11674]
115192345  ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1 [KO:K05610] [EC:3.4.19.12]
115158570  ubiquitin carboxyl-terminal hydrolase isozyme L5-like isoform X1 [KO:K05610] [EC:3.4.19.12]
115150553  ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
115207856  ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
115154973  ruvbl2; ruvB-like 2 [KO:K11338] [EC:5.6.2.3]
115166202  actr5; actin-related protein 5 [KO:K11672]
115168314  actr8; actin-related protein 8 [KO:K11673]
115174495  transcriptional repressor protein YY1-like isoform X1 [KO:K09201]
115162647  transcriptional repressor protein YY1-like [KO:K09201]
115171543  transcriptional repressor protein YY1-like isoform X1 [KO:K09201]
115172916  transcriptional repressor protein YY1-like [KO:K09201]
115163256  uncharacterized protein LOC115163256 [KO:K11661] [EC:5.6.2.-]
115201029  helicase SRCAP-like isoform X1 [KO:K11661] [EC:5.6.2.-]
115151561  dmap1; DNA methyltransferase 1-associated protein 1 isoform X1 [KO:K11324]
115189927  YEATS domain-containing protein 4 [KO:K11341]
115189957  YEATS domain-containing protein 4 [KO:K11341]
115173334  vps72; vacuolar protein sorting-associated protein 72 homolog isoform X1 [KO:K11664]
115182696  histone H2A [KO:K11251]
115182698  histone H2A [KO:K11251]
115190156  histone H2A [KO:K11251]
115190157  histone H2A [KO:K11251]
115190158  histone H2A [KO:K11251]
115193845  core histone macro-H2A.2-like [KO:K11251]
115153153  core histone macro-H2A.2-like [KO:K11251]
115153879  core histone macro-H2A.1 isoform X1 [KO:K11251]
115154962  histone H2AX [KO:K11251]
115159887  histone H2A.V [KO:K11251]
115164105  histone H2A.V-like [KO:K11251]
115179394  late histone H2A.2.2-like [KO:K11251]
115148664  histone H2A-like [KO:K11251]
115200527  histone H2A.V isoform X1 [KO:K11251]
115194220  histone H2A.Z [KO:K11251]
115196339  late histone H2A.2.2-like [KO:K11251]
115203799  histone H2A.V [KO:K11251]
115198230  histone H2A.Z [KO:K11251]
115197344  actr6; actin-related protein 6 [KO:K11662]
115148240  znhit1; zinc finger HIT domain-containing protein 1 [KO:K11663]
115198203  zinc finger HIT domain-containing protein 1-like [KO:K11663]
115164609  E1A-binding protein p400-like isoform X1 [KO:K11320] [EC:5.6.2.-]
115200036  E1A-binding protein p400-like isoform X1 [KO:K11320] [EC:5.6.2.-]
115201374  trrap; transformation/transcription domain-associated protein isoform X1 [KO:K08874]
115184155  mortality factor 4-like protein 1 [KO:K11339]
115184156  mortality factor 4-like protein 1 [KO:K11339]
115168618  MRG/MORF4L-binding protein-like [KO:K11343]
115165960  MRG/MORF4L-binding protein-like isoform X1 [KO:K11343]
115169166  bromodomain-containing protein 8-like isoform X1 [KO:K11321]
115154816  bromodomain-containing protein 8-like isoform X1 [KO:K11321]
115204428  brd8; bromodomain-containing protein 8 isoform X1 [KO:K11321]
115205556  bromodomain-containing protein 8-like isoform X1 [KO:K11321]
115180527  inhibitor of growth protein 3-like isoform X1 [KO:K11319]
115198812  inhibitor of growth protein 3 [KO:K11319]
115169832  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
115153988  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
115155536  enhancer of polycomb homolog 2-like isoform X1 [KO:K11322]
115160848  enhancer of polycomb homolog 2-like isoform X1 [KO:K11322]
115156866  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
115195873  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
115174084  chromatin modification-related protein MEAF6 isoform X1 [KO:K11344]
115175602  chromatin modification-related protein MEAF6-like isoform X1 [KO:K11344]
115154702  histone acetyltransferase KAT5-like isoform X1 [KO:K11304] [EC:2.3.1.48]
115204311  histone acetyltransferase KAT5-like [KO:K11304] [EC:2.3.1.48]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
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