Entry
Name
Endocytosis - Propithecus coquereli (Coquerel's sifaka)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Other DBs
Organism
Propithecus coquereli (Coquerel's sifaka) [GN:
pcoq ]
Gene
105805206 IL2RB; interleukin-2 receptor subunit beta isoform X1 [KO:K05069 ]
105805248 ARFGAP3; ADP-ribosylation factor GTPase-activating protein 3 [KO:K12493 ]
105806371 DNAJC6; putative tyrosine-protein phosphatase auxilin isoform X1 [KO:K09526 ]
105806579 ARPC5L; actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
105806620 ACAP2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 [KO:K12489 ]
105806748 ASAP2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
105807055 VPS37D; vacuolar protein sorting-associated protein 37D [KO:K12185 ]
105810335 VPS26B; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
105810488 ARAP2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 [KO:K18440 ]
105810662 KIAA1033; LOW QUALITY PROTEIN: WASH complex subunit 7 [KO:K18465 ]
105811090 ARFGAP2; ADP-ribosylation factor GTPase-activating protein 2 isoform X1 [KO:K12493 ]
105811155 VPS4B; vacuolar protein sorting-associated protein 4B [KO:K12196 ]
105811316 ASAP1; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 [KO:K12488 ]
105811488 ARAP1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
105811557 ARAP3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
105811733 LDLRAP1; low density lipoprotein receptor adapter protein 1 [KO:K12474 ]
105812383 ARPC4; actin-related protein 2/3 complex subunit 4 isoform X1 [KO:K05755 ]
105812399 IGF2R; LOW QUALITY PROTEIN: cation-independent mannose-6-phosphate receptor [KO:K06564 ]
105812436 PDCD6IP; programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
105812901 IQSEC3; IQ motif and SEC7 domain-containing protein 3 [KO:K12495 ]
105813411 VPS28; vacuolar protein sorting-associated protein 28 homolog [KO:K12184 ]
105813995 AGAP1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12491 ]
105814219 VPS36; vacuolar protein-sorting-associated protein 36 [KO:K12190 ]
105814831 BIN1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
105815695 CDC42; cell division control protein 42 homolog isoform X1 [KO:K04393 ]
105815706 ASAP3; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12488 ]
105815860 RAB11FIP1; rab11 family-interacting protein 1 isoform X1 [KO:K12484 ]
105816317 SH3KBP1; SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
105816722 AGAP2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
105818091 VPS35; vacuolar protein sorting-associated protein 35 [KO:K18468 ]
105818564 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [KO:K12492 ]
105818612 ARFGEF2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 [KO:K18442 ]
105819014 IQSEC1; IQ motif and SEC7 domain-containing protein 1 [KO:K12495 ]
105819323 VTA1; vacuolar protein sorting-associated protein VTA1 homolog [KO:K12199 ]
105819448 ACAP1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12489 ]
105819604 CHMP2A; charged multivesicular body protein 2a isoform X1 [KO:K12191 ]
105820038 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
105820094 CHMP5; charged multivesicular body protein 5 isoform X1 [KO:K12198 ]
105820261 VPS25; vacuolar protein-sorting-associated protein 25 [KO:K12189 ]
105820456 CAPZB; F-actin-capping protein subunit beta isoform X1 [KO:K10365 ]
105820931 ACAP3; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12489 ]
105821424 SMAD3; mothers against decapentaplegic homolog 3 isoform X1 [KO:K23605 ]
105821983 VPS45; vacuolar protein sorting-associated protein 45 [KO:K12479 ]
105822006 VPS26A; vacuolar protein sorting-associated protein 26A [KO:K18466 ]
105822867 RABEP1; rab GTPase-binding effector protein 1 isoform X1 [KO:K12480 ]
105823326 PARD6A; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
105823390 VPS4A; vacuolar protein sorting-associated protein 4A isoform X1 [KO:K12196 ]
105823445 IQSEC2; IQ motif and SEC7 domain-containing protein 2 isoform X1 [KO:K12495 ]
105824300 GBF1; golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [KO:K18443 ]
105824600 AGAP3; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
105825061 VPS37C; vacuolar protein sorting-associated protein 37C isoform X1 [KO:K12185 ]
105825199 VPS37A; vacuolar protein sorting-associated protein 37A [KO:K12185 ]
105825286 CHMP7; charged multivesicular body protein 7 isoform X1 [KO:K15053 ]
105825362 ARFGEF1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
105825592 VPS37B; vacuolar protein sorting-associated protein 37B [KO:K12185 ]
105825637 VPS29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
105825710 EPS15L1; epidermal growth factor receptor substrate 15-like 1 [KO:K12472 ]
105826632 ZFYVE16; zinc finger FYVE domain-containing protein 16 [KO:K04679 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
pcoq04060 Cytokine-cytokine receptor interaction
pcoq04070 Phosphatidylinositol signaling system
pcoq04130 SNARE interactions in vesicular transport
KO pathway