KEGG   PATHWAY: prob04974
Entry
prob04974                   Pathway                                
Name
Protein digestion and absorption - Phodopus roborovskii (desert hamster)
Description
Protein is a dietary component essential for nutritional homeostasis in humans. Normally, ingested protein undergoes a complex series of degradative processes following the action of gastric, pancreatic and small intestinal enzymes. The result of this proteolytic activity is a mixture of amino acids and small peptides. Amino acids (AAs) are transported into the enterocyte (intestinal epithelial cell) by a variety of AA transporters that are specific for cationic (basic) AA, neutral AA, and anionic (acidic) AA. Small peptides are absorbed into enterocytes by the PEPT1 transporter. Inside enterocytes peptides are hydrolyzed, and the resulting amino acids are released together with those absorbed by AA transporters into blood via multiple, basolateral, AA transporters. Hydrolysis-resistant peptides, however, are transported out of the cells by a basolateral peptide transporter that has not been identified molecularly.
Class
Organismal Systems; Digestive system
Pathway map
prob04974  Protein digestion and absorption
prob04974

Other DBs
GO: 0044256 0050892
Organism
Phodopus roborovskii (desert hamster) [GN:prob]
Gene
127212999  Col12a1; collagen alpha-1(XII) chain [KO:K08132]
127213200  [KO:K06238]
127213224  Cela3b; chymotrypsin-like elastase family member 3B [KO:K01345] [EC:3.4.21.70]
127213332  Cela2a; chymotrypsin-like elastase family member 2A [KO:K01346] [EC:3.4.21.71]
127214120  Kcnk5; potassium channel subfamily K member 5 [KO:K04916]
127214217  [KO:K01312] [EC:3.4.21.4]
127214218  [KO:K01312] [EC:3.4.21.4]
127214222  [KO:K01312] [EC:3.4.21.4]
127214306  [KO:K01312] [EC:3.4.21.4]
127214307  [KO:K01312] [EC:3.4.21.4]
127214887  Slc8a1; sodium/calcium exchanger 1 [KO:K05849]
127214910  Slc3a1; neutral and basic amino acid transport protein rBAT [KO:K14210]
127215138  Col10a1; collagen alpha-1(X) chain [KO:K19479]
127215156  Slc16a10; monocarboxylate transporter 10 [KO:K08187]
127215406  Cpa2; carboxypeptidase A2 [KO:K01298] [EC:3.4.17.15]
127215407  Cpa1; carboxypeptidase A1 [KO:K08779] [EC:3.4.17.1]
127216452  Col28a1; collagen alpha-1(XXVIII) chain [KO:K23619]
127216472  Col1a2; collagen alpha-2(I) chain [KO:K06236]
127217140  Col4a5; collagen alpha-5(IV) chain [KO:K06237]
127217145  Col4a6; collagen alpha-6(IV) chain [KO:K06237]
127217408  Atp1b4; protein ATP1B4 [KO:K01540]
127217475  Xpnpep2; xaa-Pro aminopeptidase 2 [KO:K14208] [EC:3.4.11.9]
127217568  Col22a1; collagen alpha-1(XXII) chain [KO:K16630]
127218185  Ace2; angiotensin-converting enzyme 2 [KO:K09708] [EC:3.4.17.23]
127219062  Atp1b2; sodium/potassium-transporting ATPase subunit beta-2 [KO:K01540]
127219267  Slc36a1; proton-coupled amino acid transporter 1 [KO:K14209]
127219269  Slc36a2; proton-coupled amino acid transporter 2 [KO:K14209]
127219273  Slc36a3; proton-coupled amino acid transporter 3 [KO:K14209]
127220024  [KO:K13868]
127220246  Col4a2; collagen alpha-2(IV) chain [KO:K06237]
127220247  Col4a1; collagen alpha-1(IV) chain [KO:K06237]
127220864  Slc6a19; sodium-dependent neutral amino acid transporter B(0)AT1 [KO:K05334]
127220872  Slc9a3; sodium/hydrogen exchanger 3 [KO:K12040]
127222476  Dpp4; dipeptidyl peptidase 4 [KO:K01278] [EC:3.4.14.5]
127222496  Col20a1; collagen alpha-1(XX) chain [KO:K24357]
127222609  Col9a3; LOW QUALITY PROTEIN: collagen alpha-3(IX) chain [KO:K08131]
127222669  Col5a1; collagen alpha-1(V) chain isoform X1 [KO:K19721]
127223033  Col25a1; collagen alpha-1(XXV) chain [KO:K24356]
127223119  Col11a1; collagen alpha-1(XI) chain [KO:K19721]
127223286  Atp1a4; sodium/potassium-transporting ATPase subunit alpha-4 [KO:K01539] [EC:7.2.2.13]
127223376  Cpa3; mast cell carboxypeptidase A [KO:K08780] [EC:3.4.17.1]
127223381  Cpb1; carboxypeptidase B [KO:K01291] [EC:3.4.17.2]
127223511  Atp1b1; sodium/potassium-transporting ATPase subunit beta-1 [KO:K01540]
127223608  [KO:K01539] [EC:7.2.2.13]
127224004  Col13a1; collagen alpha-1(XIII) chain [KO:K16617]
127224130  Col6a2; collagen alpha-2(VI) chain isoform X1 [KO:K06238]
127224131  Col6a1; collagen alpha-1(VI) chain [KO:K06238]
127224134  Col18a1; collagen alpha-1(XVIII) chain [KO:K06823]
127224271  Col11a2; collagen alpha-2(XI) chain [KO:K19721]
127224673  Col15a1; collagen alpha-1(XV) chain [KO:K08135]
127224774  Col27a1; collagen alpha-1(XXVII) chain isoform X1 [KO:K19721]
127225301  Col9a2; collagen alpha-2(IX) chain [KO:K08131]
127225355  Col8a2; collagen alpha-2(VIII) chain [KO:K23455]
127225427  Col16a1; collagen alpha-1(XVI) chain [KO:K24339]
127226002  Slc38a2; sodium-coupled neutral amino acid symporter 2 isoform X1 [KO:K14207]
127226016  Col2a1; collagen alpha-1(II) chain [KO:K19719]
127226191  Col3a1; collagen alpha-1(III) chain isoform X1 [KO:K19720]
127226193  Col5a2; collagen alpha-2(V) chain [KO:K19721]
127226502  Col4a3; collagen alpha-3(IV) chain [KO:K06237]
127226503  Col4a4; collagen alpha-4(IV) chain [KO:K06237]
127226656  Kcnj13; inward rectifier potassium channel 13 [KO:K05006]
127226683  Col6a3; collagen alpha-3(VI) chain [KO:K06238]
127227406  Col8a1; collagen alpha-1(VIII) chain [KO:K23455]
127227752  [KO:K06002] [EC:3.4.23.1]
127227909  Prcp; lysosomal Pro-X carboxypeptidase [KO:K01285] [EC:3.4.16.2]
127227910  [KO:K01285] [EC:3.4.16.2]
127227966  Kcne3; potassium voltage-gated channel subfamily E member 3 [KO:K04897]
127228580  Kcnq1; potassium voltage-gated channel subfamily KQT member 1 [KO:K04926]
127228802  Slc3a2; 4F2 cell-surface antigen heavy chain [KO:K06519]
127229793  Col24a1; collagen alpha-1(XXIV) chain [KO:K19721]
127230096  Slc15a1; solute carrier family 15 member 1 [KO:K14206]
127230178  Cpb2; carboxypeptidase B2 [KO:K01300] [EC:3.4.17.20]
127230400  Slc7a8; large neutral amino acids transporter small subunit 2 [KO:K13781]
127230417  Slc7a7; Y+L amino acid transporter 1 isoform X1 [KO:K13867]
127230929  Slc8a3; sodium/calcium exchanger 3 isoform X1 [KO:K05849]
127231254  Col5a3; collagen alpha-3(V) chain [KO:K19721]
127232562  Mme; neprilysin [KO:K01389] [EC:3.4.24.11]
127232592  Atp1a1; sodium/potassium-transporting ATPase subunit alpha-1 [KO:K01539] [EC:7.2.2.13]
127232604  Slc36a4; neutral amino acid uniporter 4 [KO:K14209]
127233303  Slc1a1; excitatory amino acid transporter 3 [KO:K05612]
127233563  Col17a1; collagen alpha-1(XVII) chain [KO:K07603]
127234480  [KO:K09632] [EC:3.4.21.-]
127234689  [KO:K01310] [EC:3.4.21.1]
127234975  Mep1b; meprin A subunit beta [KO:K08606] [EC:3.4.24.63]
127235389  Col14a1; collagen alpha-1(XIV) chain [KO:K08133]
127236235  Col1a1; collagen alpha-1(I) chain isoform X1 [KO:K06236]
127236300  Col7a1; collagen alpha-1(VII) chain [KO:K16628]
127236574  Mep1a; meprin A subunit alpha [KO:K01395] [EC:3.4.24.18]
127236721  Col9a1; collagen alpha-1(IX) chain [KO:K08131]
127236892  Eln; elastin isoform X1 [KO:K14211]
127237010  Col26a1; collagen alpha-1(XXVI) chain isoform X1 [KO:K24358]
127237417  Col6a5; collagen alpha-5(VI) chain [KO:K06238]
127237428  Col6a6; LOW QUALITY PROTEIN: collagen alpha-6(VI) chain [KO:K06238]
127238322  Atp1b3; sodium/potassium-transporting ATPase subunit beta-3 [KO:K01540]
127238427  Slc1a5; neutral amino acid transporter B(0) [KO:K05616]
127238563  Atp1a3; sodium/potassium-transporting ATPase subunit alpha-3 isoform X1 [KO:K01539] [EC:7.2.2.13]
127238615  Slc8a2; sodium/calcium exchanger 2 isoform X1 [KO:K05849]
127238690  Kcnn4; intermediate conductance calcium-activated potassium channel protein 4 [KO:K04945]
127238729  Slc7a9; B(0,+)-type amino acid transporter 1 [KO:K13868]
Compound
C00011  CO2
C00014  Ammonia
C00025  L-Glutamate
C00033  Acetate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00076  Calcium cation
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00080  H+
C00082  L-Tyrosine
C00097  L-Cysteine
C00099  beta-Alanine
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00146  Phenol
C00148  L-Proline
C00152  L-Asparagine
C00163  Propanoate
C00183  L-Valine
C00188  L-Threonine
C00238  Potassium cation
C00246  Butanoic acid
C00282  Hydrogen
C00388  Histamine
C00407  L-Isoleucine
C00463  Indole
C00483  Tyramine
C00491  L-Cystine
C01327  Hydrochloric acid
C01330  Sodium cation
C01438  Methane
C01468  4-Cresol
C01672  Cadaverine
C01746  Piperidine
C02632  2-Methylpropanoate
C05996  Branched chain fatty acid
C08262  3-Methylbutanoic acid
C16138  L-Pyrrolysine
C18319  2-Methylbutyrate
Reference
  Authors
Broer S
  Title
Amino acid transport across mammalian intestinal and renal epithelia.
  Journal
Physiol Rev 88:249-86 (2008)
DOI:10.1152/physrev.00018.2006
Reference
  Authors
Palacin M, Nunes V, Font-Llitjos M, Jimenez-Vidal M, Fort J, Gasol E, Pineda M, Feliubadalo L, Chillaron J, Zorzano A
  Title
The genetics of heteromeric amino acid transporters.
  Journal
Physiology (Bethesda) 20:112-24 (2005)
DOI:10.1152/physiol.00051.2004
Reference
  Authors
Goodman BE
  Title
Insights into digestion and absorption of major nutrients in humans.
  Journal
Adv Physiol Educ 34:44-53 (2010)
DOI:10.1152/advan.00094.2009
Reference
  Authors
Wagner CA, Lang F, Broer S
  Title
Function and structure of heterodimeric amino acid transporters.
  Journal
Am J Physiol Cell Physiol 281:C1077-93 (2001)
DOI:10.1152/ajpcell.2001.281.4.C1077
Reference
  Authors
Broer S
  Title
Apical transporters for neutral amino acids: physiology and pathophysiology.
  Journal
Physiology (Bethesda) 23:95-103 (2008)
DOI:10.1152/physiol.00045.2007
Reference
PMID:9687539
  Authors
Wu G
  Title
Intestinal mucosal amino acid catabolism.
  Journal
J Nutr 128:1249-52 (1998)
DOI:10.1093/jn/128.8.1249
Reference
  Authors
Daniel H
  Title
Molecular and integrative physiology of intestinal peptide transport.
  Journal
Annu Rev Physiol 66:361-84 (2004)
DOI:10.1146/annurev.physiol.66.032102.144149
Reference
  Authors
Rubio-Aliaga I, Daniel H
  Title
Mammalian peptide transporters as targets for drug delivery.
  Journal
Trends Pharmacol Sci 23:434-40 (2002)
DOI:10.1016/S0165-6147(02)02072-2
Reference
PMID:7937532
  Authors
Bai JP
  Title
Distribution of brush-border membrane peptidases along the rat intestine.
  Journal
Pharm Res 11:897-900 (1994)
DOI:10.1023/a:1018946228432
Reference
  Authors
Guarner F, Malagelada JR
  Title
Gut flora in health and disease.
  Journal
Lancet 361:512-9 (2003)
DOI:10.1016/S0140-6736(03)12489-0
Reference
  Authors
Smith EA, Macfarlane GT
  Title
Dissimilatory amino Acid metabolism in human colonic bacteria.
  Journal
Anaerobe 3:327-37 (1997)
DOI:10.1006/anae.1997.0121
Reference
  Authors
Schepers E, Glorieux G, Vanholder R
  Title
The gut: the forgotten organ in uremia?
  Journal
Blood Purif 29:130-6 (2010)
DOI:10.1159/000245639
Reference
  Authors
John H.Cummings
  Title
The large intestine in nutrition and disease
  Journal
Institut Danone
Reference
  Authors
Heitzmann D, Warth R
  Title
Physiology and pathophysiology of potassium channels in gastrointestinal epithelia.
  Journal
Physiol Rev 88:1119-82 (2008)
DOI:10.1152/physrev.00020.2007
Related
pathway
prob00250  Alanine, aspartate and glutamate metabolism
prob04530  Tight junction
prob04971  Gastric acid secretion
prob04972  Pancreatic secretion
KO pathway
ko04974   

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