SSDB Best Search Result

Entry:mesw:A9K65_004035 (837 a.a.)
Name:ATP-dependent DNA ligase
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 201 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829     5132     0.901      838     
sno:Snov_0819 DNA ligase D                              K01971     842     2842     0.512      861     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900     2695     0.479      897     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865     2656     0.484      862     
atu:Atu4632 ATP-dependent DNA ligase                    K01971     771     2592     0.514      788     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882     2424     0.457      887     
rle:pRL120229 putative DNA ligase family protein        K01971     881     2397     0.459      883     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829     2381     0.454      840     
xau:Xaut_4365 DNA ligase D                              K01971     886     2376     0.456      872     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892     2363     0.446      897     
ssy:SLG_04290 putative DNA ligase                       K01971     835     2362     0.445      838     
swi:Swit_3982 DNA ligase D                              K01971     837     2288     0.440      846     
cpy:Cphy_1729 DNA ligase D                              K01971     813     2282     0.423      837     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910     2279     0.446      864     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901     2266     0.439      863     
rpa:TX73_018915 DNA ligase D                            K01971     914     2261     0.444      919     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843     2248     0.428      852     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868     2241     0.438      829     
dsy:DSY0616 hypothetical protein                        K01971     818     2234     0.418      846     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866     2209     0.437      860     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851     2146     0.430      852     
pae:PA2138 multifunctional non-homologous end joining p K01971     840     2088     0.427      837     
ppu:PP_3260 DNA ligase D                                K01971     833     2076     0.417      834     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828     1948     0.402      846     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001     1937     0.378      984     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123     1915     0.399      808     
xcc:XCC2307 ATP-dependent DNA ligase                    K01971     849     1851     0.385      858     
scl:sce3523 unnamed protein product; High confidence in K01971     762     1838     0.439      683     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872     1838     0.380      877     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836     1778     0.380      843     
phe:Phep_1702 DNA ligase D                              K01971     877     1752     0.376      889     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159     1640     0.338      1099    
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742     1628     0.366      853     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      958     0.377      512     
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670      958     0.321      627     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      949     0.376      527     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808      932     0.357      526     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      924     0.360      525     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770      901     0.366      530     
msm:MSMEG_5570 DNA ligase                               K01971     755      892     0.358      534     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      889     0.364      530     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      881     0.353      535     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      874     0.353      555     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      871     0.350      532     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      856     0.362      533     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      853     0.362      533     
vg:26737567 Sinorhizobium phage phiLM21; non-homologous K01971     330      809     0.434      318     
sen:SACE_4181 ATP dependent DNA ligase                  K01971     647      766     0.280      835     
pde:Pden_4186 conserved hypothetical protein            K01971     330      763     0.421      297     
oih:OB3034 hypothetical conserved protein               K01971     595      694     0.272      599     
sct:SCAT_5457 DNA polymerase LigD, ligase domain                   313      634     0.364      316     
sgu:SGLAU_27360 DNA polymerase LigD, polymerase domain- K01971     308      604     0.367      286     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      602     0.273      568     
det:DET0850 conserved hypothetical protein                         183      599     0.521      190     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      586     0.275      651     
pfl:PFL_6269 Hypothetical protein                       K01971     186      574     0.578      147     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      566     0.239      627     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      554     0.372      323     
sco:SCO6498 conserved hypothetical protein SC1E6.07     K01971     319      552     0.331      302     
stp:Strop_3968 ATP dependent DNA ligase                 K01971     312      530     0.368      318     
chy:CHY_0025 conserved hypothetical protein             K01971     293      525     0.315      289     
nca:Noca_1235 ATP dependent DNA ligase                  K01971     311      524     0.325      317     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      517     0.346      257     
sma:SAVERM_1696 putative DNA primase, small subunit                338      495     0.350      260     
ase:ACPL_520 DNA ligase (ATP)                           K01971     304      490     0.353      306     
sro:Sros_6714 DNA primase small subunit                            334      460     0.316      269     
sgr:SGR_1023 conserved hypothetical protein                        345      456     0.323      263     
afu:AF_1725 DNA ligase, putative                        K01971     313      443     0.359      315     
mba:Mbar_A2115 conserved hypothetical protein                      151      436     0.468      156     
mac:MA_3428 conserved hypothetical protein                         156      434     0.462      158     
mma:MM_0209 hypothetical protein                                   152      432     0.449      156     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      428     0.314      271     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      426     0.322      311     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      410     0.334      317     
ksk:KSE_05320 hypothetical protein                      K01971     173      350     0.399      168     
pfu:PF1635 DNA ligase (lig)                             K10747     561      328     0.265      340     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      322     0.273      571     
pab:PAB2002 lig DNA ligase                              K10747     559      322     0.265      339     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      313     0.269      335     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      313     0.266      334     
pai:PAE0833 DNA ligase                                  K10747     584      312     0.275      284     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      308     0.262      343     
ton:TON_1515 thermostable DNA ligase                    K10747     562      297     0.260      335     
hth:HTH_1466 DNA ligase                                            572      296     0.269      275     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      287     0.243      337     
aor:AO090120000322 unnamed protein product; ATP-depende K10777    1006      286     0.308      347     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      286     0.267      303     
hma:rrnAC0463 DNA ligase                                K10747     554      285     0.256      539     
smo:SELMODRAFT_414166 hypothetical protein              K10777    1171      275     0.248      435     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      272     0.281      313     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      268     0.262      443     
ani:ANIA_00097 DNA ligase (ATP) DNL4                    K10777    1009      265     0.281      399     
tac:Ta1148 DNA ligase related protein                   K10747     588      265     0.260      277     
sto:STK_02230 DNA ligase                                K10747     600      262     0.257      303     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      260     0.254      335     
mth:MTH_1580 DNA ligase                                 K10747     561      258     0.267      303     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      255     0.275      346     
mdo:100616962 DNA ligase 1-like                                    632      255     0.262      390     
ssc:100520434 DNA ligase 1                              K10747     923      254     0.282      284     
afm:AFUA_5G12050 DNA ligase                             K10777     979      251     0.275      400     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      249     0.265      340     
yli:2911076 DNA ligase 4                                K10777     956      249     0.252      389     
mmu:16881 DNA ligase 1                                  K10747     916      247     0.274      285     
tca:657210 DNA ligase 4                                 K10777     847      246     0.237      418     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      246     0.274      325     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      245     0.270      322     
cpoc:100734013 DNA ligase 1                             K10747     919      244     0.276      322     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      244     0.278      288     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      244     0.276      326     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      244     0.283      321     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      244     0.276      326     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      243     0.285      281     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      242     0.259      352     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      242     0.276      322     
bta:100124507 DNA ligase 1                              K10747     916      242     0.259      352     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      239     0.243      305     
rno:81513 DNA ligase 1                                  K10747     913      238     0.267      285     
zma:103645969 putative DNA ligase 4 isoform X1          K10777    1208      237     0.270      382     
aga:1271687 DNA ligase 4                                K10777     914      236     0.265      392     
sce:YOR005C DNA ligase (ATP) DNL4                       K10777     944      235     0.302      225     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      233     0.258      372     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      233     0.296      314     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      232     0.255      306     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      232     0.249      305     
hal:VNG_0881G DNA ligase                                K10747     561      231     0.273      300     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      229     0.270      322     
kla:KLLA0_D01089g uncharacterized protein               K10777     907      228     0.288      271     
nta:107805422 DNA ligase 6 isoform X1                             1426      227     0.244      348     
maj:MAA_09935 DNA ligase                                K10777     987      226     0.259      351     
dre:556995 DNA ligase 1                                 K10747    1058      226     0.260      281     
cne:CNI04170 DNA ligase, putative                       K10747     803      224     0.266      301     
pto:PTO0672 DNA ligase                                  K10747     590      224     0.245      331     
vvi:100266816 DNA ligase 6 isoform X1                             1449      223     0.262      343     
tre:TRIREDRAFT_58509 DNA ligase                         K10777     960      221     0.250      392     
tva:5466150 DNA ligase 1/3 family member family                    679      220     0.268      317     
csv:101204319 DNA ligase 4 isoform X1                   K10777    1215      219     0.243      453     
aag:23687785 DNA ligase 4                               K10777     941      218     0.243      408     
aae:aq_1394 DNA ligase (ATP dependent)                             585      218     0.256      317     
pif:PITG_03514 DNA ligase, putative                     K10777     971      213     0.242      491     
ppp:112291880 DNA ligase 4                              K10777    1297      213     0.257      366     
spo:2539042 DNA repair ligase Lig4                      K10777     913      213     0.247      271     
amj:102570861 DNA ligase 4                              K10777     914      212     0.238      323     
sot:102603887 DNA ligase 1                                        1441      212     0.245      343     
sly:101249429 DNA ligase 6 isoform X1                             1441      212     0.245      343     
ncr:NCU06264 mutagen sensitive-53                       K10777    1050      211     0.260      346     
spu:581252 DNA ligase 3                                 K10776    1049      211     0.238      370     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      211     0.249      361     
ath:AT5G57160 DNA ligase IV                             K10777    1219      211     0.247      393     
mtr:11441582 DNA ligase 4                               K10777    1169      210     0.267      307     
mgr:MGG_12899 DNA ligase 4                              K10777    1001      210     0.252      329     
xom:XOO1771 DNA ligase                                             534      210     0.313      249     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      210     0.253      281     
tcr:506835.120 DNA ligase I                             K10747     701      209     0.257      358     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      209     0.260      346     
bmor:101739679 DNA ligase 3                             K10776     998      208     0.255      274     
xtr:549735 DNA ligase 4                                 K10777     911      208     0.248      322     
dme:Dmel_CG17227 DNA ligase 3                           K10776     806      208     0.244      307     
rcu:8279553 DNA ligase 4                                K10777    1181      206     0.249      437     
ehi:EHI_111060 DNA ligase                               K10747     685      204     0.264      284     
ola:101167483 DNA ligase 1                              K10747     993      203     0.267      285     
tru:101071353 DNA ligase 4                              K10777     908      203     0.231      329     
gmx:100816002 DNA ligase 4 isoform X1                   K10777    1171      203     0.257      455     
ame:413086 DNA ligase 3 isoform X1                      K10776    1117      203     0.225      333     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      202     0.239      330     
cit:102608121 DNA ligase 4                              K10777    1159      200     0.239      397     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      200     0.242      327     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      199     0.264      314     
zga:ZOBELLIA_2113 DNA ligase                                       554      199     0.264      208     
pmur:107285325 DNA ligase 1                             K10747     944      198     0.256      308     
dne:112984532 DNA ligase 4                              K10777     911      197     0.224      344     
pti:PHATR_10585 hypothetical protein                               337      196     0.262      324     
gga:418764 DNA ligase 4                                 K10777     912      196     0.238      323     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      196     0.253      348     
fvr:FVEG_10341 DNA ligase 4                             K10777     984      195     0.250      368     
mdm:103451039 DNA ligase 4                              K10777    1162      195     0.253      395     
clv:102093808 DNA ligase 4                              K10777     912      195     0.233      348     
tgu:100225693 DNA ligase 4                              K10777     911      194     0.236      348     
xla:394389 DNA ligase (ATP) 4                           K10777     911      194     0.227      344     
nve:5509532 DNA ligase 3                                K10776     946      191     0.248      326     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      190     0.288      274     
osa:9269006 putative DNA ligase 4                       K10777    1296      190     0.245      380     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      187     0.253      356     
cin:100176197 DNA ligase 4 isoform X1                   K10777    1041      184     0.230      322     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      183     0.266      301     
tgo:7896565 DNA ligase 1, putative                                1331      182     0.240      312     
fgr:FGSG_05453 DNA ligase                               K10747     867      181     0.233      330     
lil:LA_0984 ATP-dependent DNA ligase                    K01971     501      180     0.246      240     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      179     0.220      372     
tps:THAPSDRAFT_268404 ligase                            K10747     633      178     0.245      383     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      178     0.248      303     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      175     0.236      313     
smm:Smp_148660 putative DNA ligase IV                   K10777     848      163     0.228      215     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      163     0.227      313     
tth:TT_C0023 fumarate/succinate/L-aspartate dehydrogena K07077     545      151     0.273      311     
bpe:BP2594 ABC transport protein, solute binding compon K02035     504      147     0.230      361     
vpa:VP1477 DNA ligase                                   K26441     280      145     0.275      229     
gla:GL50803_007649 DNA ligase (ATP)                                810      142     0.248      303     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      140     0.223      247     
mar:MAE_18310 phosphate-binding periplasmic protein     K02040     337      135     0.287      136     
vfi:VF_1450 DNA ligase                                  K26441     285      123     0.251      227     
tfu:Tfu_0365 conserved hypothetical protein                        150      116     0.330      112     

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