KEGG   PATHWAY: apla04620
Entry
apla04620                   Pathway                                
Name
Toll-like receptor signaling pathway - Anas platyrhynchos (mallard)
Description
Specific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors identified as homologs of Toll in Drosophila. Mammalian TLRs are expressed on innate immune cells, such as macrophages and dendritic cells, and respond to the membrane components of Gram-positive or Gram-negative bacteria. Pathogen recognition by TLRs provokes rapid activation of innate immunity by inducing production of proinflammatory cytokines and upregulation of costimulatory molecules. TLR signaling pathways are separated into two groups: a MyD88-dependent pathway that leads to the production of proinflammatory cytokines with quick activation of NF-{kappa}B and MAPK, and a MyD88-independent pathway associated with the induction of IFN-beta and IFN-inducible genes, and maturation of dendritic cells with slow activation of NF-{kappa}B and MAPK.
Class
Organismal Systems; Immune system
Pathway map
apla04620  Toll-like receptor signaling pathway
apla04620

Organism
Anas platyrhynchos (mallard) [GN:apla]
Gene
101789692  TLR1-A; toll-like receptor 1 precursor [KO:K10169]
101790153  LY96; lymphocyte antigen 96 [KO:K05400]
101790255  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
101790309  TAB2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404]
101790598  [KO:K05402]
101790771  TLR3; toll-like receptor 3 precursor [KO:K05401]
101790975  IFNAR1; interferon alpha/beta receptor 1 [KO:K05130]
101791037  MAP2K1; LOW QUALITY PROTEIN: dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
101791305  TICAM1; TIR domain-containing adapter molecule 1 [KO:K05842]
101791396  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
101791769  MAP3K8; mitogen-activated protein kinase kinase kinase 8 [KO:K04415] [EC:2.7.11.25]
101791786  TLR2; toll-like receptor 2 precursor [KO:K10159]
101792057  MAPK11; mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
101792362  SPP1; osteopontin [KO:K06250]
101793419  CD40; tumor necrosis factor receptor superfamily member 5 [KO:K03160]
101793591  MAPK12; mitogen-activated protein kinase 12 [KO:K04441] [EC:2.7.11.24]
101793594  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
101793675  TAB1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [KO:K04403]
101794110  IRAK4; interleukin-1 receptor-associated kinase 4 isoform X1 [KO:K04733] [EC:2.7.11.1]
101794155  CTSK; cathepsin K isoform X3 [KO:K01371] [EC:3.4.22.38]
101794331  CD86; T-lymphocyte activation antigen CD86 isoform X1 [KO:K05413]
101794879  JAK1; tyrosine-protein kinase JAK1 [KO:K11217] [EC:2.7.10.2]
101795022  STAT1; signal transducer and activator of transcription 1-alpha/beta isoform X1 [KO:K11220]
101795759  [KO:K02649]
101795904  IRF7; interferon regulatory factor 7 isoform X1 [KO:K09447]
101796029  CD80; T-lymphocyte activation antigen CD80 [KO:K05412]
101796052  [KO:K05414]
101796183  PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
101796626  JUN; transcription factor AP-1 [KO:K04448]
101796752  TRAF3; TNF receptor-associated factor 3 isoform X1 [KO:K03174]
101797264  TLR7; toll-like receptor 7 isoform X1 [KO:K05404]
101797621  MYD88; myeloid differentiation primary response protein MyD88 [KO:K04729]
101797832  TLR5; toll-like receptor 5 precursor [KO:K10168]
101798321  IL6; interleukin-6 [KO:K05405]
101798784  [KO:K04391]
101798847  [KO:K05414]
101799011  MAPK9; mitogen-activated protein kinase 9 isoform X5 [KO:K04440] [EC:2.7.11.24]
101799388  TLR4; toll-like receptor 4 precursor [KO:K10160]
101799717  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X2 [KO:K02649]
101800085  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
101800153  IKBKE; LOW QUALITY PROTEIN: inhibitor of nuclear factor kappa-B kinase subunit epsilon [KO:K07211] [EC:2.7.11.10]
101800211  IL12B; LOW QUALITY PROTEIN: interleukin-12 subunit beta [KO:K05425]
101800319  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
101800458  AKT1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
101800620  CCL26; C-C motif chemokine 26 precursor [KO:K12499]
101800900  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922] [EC:2.7.1.153]
101800921  [KO:K12964]
101800938  [KO:K12964]
101800996  MAP3K7; LOW QUALITY PROTEIN: mitogen-activated protein kinase kinase kinase 7 [KO:K04427] [EC:2.7.11.25]
101801698  FOS; proto-oncogene c-Fos [KO:K04379]
101801863  FADD; FAS-associated death domain protein [KO:K02373]
101801980  RAC1; ras-related C3 botulinum toxin substrate 1 isoform X3 [KO:K04392]
101801990  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
101802116  MAPK13; mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
101802411  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
101802796  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
101802909  [KO:K12964]
101803161  [KO:K04398] [EC:3.4.22.61]
101803371  MAP2K3; LOW QUALITY PROTEIN: dual specificity mitogen-activated protein kinase kinase 3 [KO:K04432] [EC:2.7.12.2]
101803431  NFKB1; nuclear factor NF-kappa-B p105 subunit [KO:K02580]
101803461  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
101803817  [KO:K10030]
101804010  IL8; interleukin-8 precursor [KO:K10030]
101804315  IFNAR2; interferon alpha/beta receptor 2 isoform X1 [KO:K05131]
101804556  AKT3; RAC-gamma serine/threonine-protein kinase isoform X2 [KO:K04456] [EC:2.7.11.1]
101805023  MAPK14; mitogen-activated protein kinase 14 isoform X3 [KO:K04441] [EC:2.7.11.24]
101805315  MAP2K4; dual specificity mitogen-activated protein kinase kinase 4 isoform X8 [KO:K04430] [EC:2.7.12.2]
106014283  [KO:K04398] [EC:3.4.22.61]
106014314  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
106014932  [KO:K10030]
106017129  [KO:K05403]
106020465  [KO:K05398]
110351183  [KO:K12964]
110351185  [KO:K10159]
113840164  [KO:K05415]
113840166  [KO:K05415]
113844483  IL12A; interleukin-12 subunit alpha [KO:K05406]
119713161  MAP2K6; dual specificity mitogen-activated protein kinase kinase 6 isoform X1 [KO:K04433] [EC:2.7.12.2]
119713475  [KO:K04519]
119714201  MAP2K2; dual specificity mitogen-activated protein kinase kinase 2 isoform X1 [KO:K04369] [EC:2.7.12.2]
119714613  STAT2; signal transducer and activator of transcription 2 [KO:K11221]
119715120  [KO:K05398]
119715421  [KO:K10159]
119717337  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha [KO:K04467] [EC:2.7.11.10]
Reference
  Authors
Kawai T, Akira S.
  Title
TLR signaling.
  Journal
Semin Immunol 19:24-32 (2007)
DOI:10.1016/j.smim.2006.12.004
Reference
  Authors
O'Neill LA, Bowie AG.
  Title
The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling.
  Journal
Nat Rev Immunol 7:353-64 (2007)
DOI:10.1038/nri2079
Reference
  Authors
Honda K, Taniguchi T.
  Title
IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors.
  Journal
Nat Rev Immunol 6:644-58 (2006)
DOI:10.1038/nri1900
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and Type I interferons.
  Journal
J Biol Chem 282:15319-23 (2007)
DOI:10.1074/jbc.R700009200
Reference
  Authors
Akira S, Uematsu S, Takeuchi O.
  Title
Pathogen recognition and innate immunity.
  Journal
Cell 124:783-801 (2006)
DOI:10.1016/j.cell.2006.02.015
Reference
  Authors
Yamamoto M, Takeda K, Akira S.
  Title
TIR domain-containing adaptors define the specificity of TLR signaling.
  Journal
Mol Immunol 40:861-8 (2004)
DOI:10.1016/j.molimm.2003.10.006
Reference
  Authors
Means TK, Hayashi F, Smith KD, Aderem A, Luster AD.
  Title
The Toll-like receptor 5 stimulus bacterial flagellin induces maturation and chemokine production in human dendritic cells.
  Journal
J Immunol 170:5165-75 (2003)
DOI:10.4049/jimmunol.170.10.5165
Reference
  Authors
Aderem A, Smith KD.
  Title
A systems approach to dissecting immunity and inflammation.
  Journal
Semin Immunol 16:55-67 (2004)
DOI:10.1016/j.smim.2003.10.002
Reference
  Authors
Banerjee A, Gerondakis S.
  Title
Coordinating TLR-activated signaling pathways in cells of the immune system.
  Journal
Immunol Cell Biol 85:420-4 (2007)
DOI:10.1038/sj.icb.7100098
Reference
  Authors
Loniewski KJ, Patial S, Parameswaran N.
  Title
Sensitivity of TLR4- and -7-induced NF kappa B1 p105-TPL2-ERK pathway to TNF-receptor-associated-factor-6 revealed by RNAi in mouse macrophages.
  Journal
Mol Immunol 44:3715-23 (2007)
DOI:10.1016/j.molimm.2007.04.002
Reference
  Authors
Arbibe L, Mira JP, Teusch N, Kline L, Guha M, Mackman N, Godowski PJ, Ulevitch RJ, Knaus UG.
  Title
Toll-like receptor 2-mediated NF-kappa B activation requires a Rac1-dependent pathway.
  Journal
Nat Immunol 1:533-40 (2000)
DOI:10.1038/82797
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and innate immunity.
  Journal
J Mol Med 84:712-25 (2006)
DOI:10.1007/s00109-006-0084-y
Related
pathway
apla04010  MAPK signaling pathway
apla04060  Cytokine-cytokine receptor interaction
apla04120  Ubiquitin mediated proteolysis
apla04210  Apoptosis
KO pathway
ko04620   

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