KEGG   PATHWAY: npr04620
Entry
npr04620                    Pathway                                
Name
Toll-like receptor signaling pathway - Nanorana parkeri (Xizang Plateau frog)
Description
Specific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors identified as homologs of Toll in Drosophila. Mammalian TLRs are expressed on innate immune cells, such as macrophages and dendritic cells, and respond to the membrane components of Gram-positive or Gram-negative bacteria. Pathogen recognition by TLRs provokes rapid activation of innate immunity by inducing production of proinflammatory cytokines and upregulation of costimulatory molecules. TLR signaling pathways are separated into two groups: a MyD88-dependent pathway that leads to the production of proinflammatory cytokines with quick activation of NF-{kappa}B and MAPK, and a MyD88-independent pathway associated with the induction of IFN-beta and IFN-inducible genes, and maturation of dendritic cells with slow activation of NF-{kappa}B and MAPK.
Class
Organismal Systems; Immune system
Pathway map
npr04620  Toll-like receptor signaling pathway
npr04620

Organism
Nanorana parkeri (Xizang Plateau frog) [GN:npr]
Gene
108784101  MAP2K1; dual specificity mitogen-activated protein kinase kinase 1 [KO:K04368] [EC:2.7.12.2]
108784114  RELA; transcription factor p65 [KO:K04735]
108784626  MYD88; myeloid differentiation primary response protein MyD88 [KO:K04729]
108784676  [KO:K12671]
108785250  [KO:K10168]
108785454  FADD; FAS-associated death domain protein [KO:K02373]
108785587  [KO:K04519]
108785600  [KO:K04519]
108785765  PIK3CA; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
108786686  [KO:K09447]
108787157  AKT1; RAC-alpha serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
108787378  [KO:K04441] [EC:2.7.11.24]
108787502  IRF5; interferon regulatory factor 5 [KO:K09446]
108787821  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
108788164  JUN; transcription factor AP-1 [KO:K04448]
108788197  TLR2; toll-like receptor 2 isoform X1 [KO:K10159]
108788240  [KO:K04441] [EC:2.7.11.24]
108788845  MAP3K8; mitogen-activated protein kinase kinase kinase 8 [KO:K04415] [EC:2.7.11.25]
108789013  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
108789059  NFKB1; nuclear factor NF-kappa-B p105 subunit [KO:K02580]
108789107  CD40; tumor necrosis factor receptor superfamily member 5 [KO:K03160]
108789386  TAB2; TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1 [KO:K04404]
108789468  IRAK4; LOW QUALITY PROTEIN: interleukin-1 receptor-associated kinase 4 [KO:K04733] [EC:2.7.11.1]
108789765  TICAM2; TIR domain-containing adapter molecule 2 [KO:K05409]
108789812  [KO:K01371] [EC:3.4.22.38]
108789813  [KO:K01371] [EC:3.4.22.38]
108790442  IRAK1; interleukin-1 receptor-associated kinase 1 [KO:K04730] [EC:2.7.11.1]
108790540  MAP2K7; dual specificity mitogen-activated protein kinase kinase 7 isoform X1 [KO:K04431] [EC:2.7.12.2]
108790750  TRAF3; TNF receptor-associated factor 3 [KO:K03174]
108790918  TLR3; toll-like receptor 3 [KO:K05401]
108790991  TOLLIP; toll-interacting protein [KO:K05402]
108791352  IKBKG; NF-kappa-B essential modulator [KO:K07210]
108791424  [KO:K10159]
108791446  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta [KO:K07209] [EC:2.7.11.10]
108791510  [KO:K11221]
108792339  JAK1; tyrosine-protein kinase JAK1 [KO:K11217] [EC:2.7.10.2]
108793401  RIPK1; receptor-interacting serine/threonine-protein kinase 1 [KO:K02861] [EC:2.7.11.1]
108793742  [KO:K03156]
108794095  AKT2; RAC-beta serine/threonine-protein kinase [KO:K04456] [EC:2.7.11.1]
108794147  [KO:K05130]
108794473  RAC1; ras-related C3 botulinum toxin substrate 1 [KO:K04392]
108794648  [KO:K04440] [EC:2.7.11.24]
108794768  [KO:K10160]
108794863  [KO:K10030]
108794864  [KO:K10030]
108794889  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
108794923  [KO:K05404]
108794925  [KO:K05404]
108794926  TLR8; toll-like receptor 8 [KO:K10170]
108795015  [KO:K10159]
108795080  [KO:K04398] [EC:3.4.22.61]
108795750  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
108796670  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1 [KO:K00922] [EC:2.7.1.153]
108797293  [KO:K05405]
108797511  [KO:K05411]
108797512  [KO:K05411]
108797628  PIK3R1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649]
108797654  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha [KO:K04467] [EC:2.7.11.10]
108798164  TAB1; TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 [KO:K04403]
108798423  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922] [EC:2.7.1.153]
108798858  STAT1; signal transducer and activator of transcription 1-alpha/beta [KO:K11220]
108800110  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
108801303  TLR5; toll-like receptor 5 [KO:K10168]
108801499  MAP2K4; dual specificity mitogen-activated protein kinase kinase 4 isoform X1 [KO:K04430] [EC:2.7.12.2]
108802481  FOS; proto-oncogene c-Fos [KO:K04379]
108802963  [KO:K02649]
108803420  [KO:K05425]
108804455  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
108804572  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
108804653  [KO:K10169]
108804838  MAPK12; mitogen-activated protein kinase 12 isoform X1 [KO:K04441] [EC:2.7.11.24]
108804839  MAPK11; mitogen-activated protein kinase 11 isoform X1 [KO:K04441] [EC:2.7.11.24]
Reference
  Authors
Kawai T, Akira S.
  Title
TLR signaling.
  Journal
Semin Immunol 19:24-32 (2007)
DOI:10.1016/j.smim.2006.12.004
Reference
  Authors
O'Neill LA, Bowie AG.
  Title
The family of five: TIR-domain-containing adaptors in Toll-like receptor signalling.
  Journal
Nat Rev Immunol 7:353-64 (2007)
DOI:10.1038/nri2079
Reference
  Authors
Honda K, Taniguchi T.
  Title
IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors.
  Journal
Nat Rev Immunol 6:644-58 (2006)
DOI:10.1038/nri1900
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and Type I interferons.
  Journal
J Biol Chem 282:15319-23 (2007)
DOI:10.1074/jbc.R700009200
Reference
  Authors
Akira S, Uematsu S, Takeuchi O.
  Title
Pathogen recognition and innate immunity.
  Journal
Cell 124:783-801 (2006)
DOI:10.1016/j.cell.2006.02.015
Reference
  Authors
Yamamoto M, Takeda K, Akira S.
  Title
TIR domain-containing adaptors define the specificity of TLR signaling.
  Journal
Mol Immunol 40:861-8 (2004)
DOI:10.1016/j.molimm.2003.10.006
Reference
  Authors
Means TK, Hayashi F, Smith KD, Aderem A, Luster AD.
  Title
The Toll-like receptor 5 stimulus bacterial flagellin induces maturation and chemokine production in human dendritic cells.
  Journal
J Immunol 170:5165-75 (2003)
DOI:10.4049/jimmunol.170.10.5165
Reference
  Authors
Aderem A, Smith KD.
  Title
A systems approach to dissecting immunity and inflammation.
  Journal
Semin Immunol 16:55-67 (2004)
DOI:10.1016/j.smim.2003.10.002
Reference
  Authors
Banerjee A, Gerondakis S.
  Title
Coordinating TLR-activated signaling pathways in cells of the immune system.
  Journal
Immunol Cell Biol 85:420-4 (2007)
DOI:10.1038/sj.icb.7100098
Reference
  Authors
Loniewski KJ, Patial S, Parameswaran N.
  Title
Sensitivity of TLR4- and -7-induced NF kappa B1 p105-TPL2-ERK pathway to TNF-receptor-associated-factor-6 revealed by RNAi in mouse macrophages.
  Journal
Mol Immunol 44:3715-23 (2007)
DOI:10.1016/j.molimm.2007.04.002
Reference
  Authors
Arbibe L, Mira JP, Teusch N, Kline L, Guha M, Mackman N, Godowski PJ, Ulevitch RJ, Knaus UG.
  Title
Toll-like receptor 2-mediated NF-kappa B activation requires a Rac1-dependent pathway.
  Journal
Nat Immunol 1:533-40 (2000)
DOI:10.1038/82797
Reference
  Authors
Uematsu S, Akira S.
  Title
Toll-like receptors and innate immunity.
  Journal
J Mol Med 84:712-25 (2006)
DOI:10.1007/s00109-006-0084-y
Related
pathway
npr04010  MAPK signaling pathway
npr04060  Cytokine-cytokine receptor interaction
npr04120  Ubiquitin mediated proteolysis
npr04210  Apoptosis
KO pathway
ko04620   

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