KEGG   PATHWAY: cic00040
Entry
cic00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Citrus x clementina (clementine)
Class
Metabolism; Carbohydrate metabolism
Pathway map
cic00040  Pentose and glucuronate interconversions
cic00040

Module
cic_M00081  Pectin degradation [PATH:cic00040]
Organism
Citrus x clementina (clementine) [GN:cic]
Gene
CICLE_v10007993mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10007806mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10004742mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10004719mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10023535mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10007964mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10024598mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10019773mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10010655mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10031872mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10014787mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10030015mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10000705mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10003954mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10029855mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10000415mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10024391mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10023588mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10023718mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10020108mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v100237231m  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10010616mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10012239mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10024027mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10029966mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10030026mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10030318mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10003835mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10003723mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10003299mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10010593mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10025238mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10003641mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10000816mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10027321mg  hypothetical protein [KO:K01051] [EC:3.1.1.11]
CICLE_v10011635mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10015474mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10032073mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10031429mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10031653mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10011763mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10019202mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10013750mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10020193mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10020423mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10004783mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10013497mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10011762mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10011951mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10031337mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10008571mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10024272mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10017878mg  hypothetical protein [KO:K01728] [EC:4.2.2.2]
CICLE_v10027074mg  hypothetical protein [KO:K01184] [EC:3.2.1.15]
CICLE_v10015111mg  hypothetical protein [KO:K01184] [EC:3.2.1.15]
CICLE_v10027366mg  hypothetical protein [KO:K01184] [EC:3.2.1.15]
CICLE_v10026919mg  hypothetical protein [KO:K01184] [EC:3.2.1.15]
CICLE_v10010440mg  hypothetical protein [KO:K01184] [EC:3.2.1.15]
CICLE_v10005317mg  hypothetical protein [KO:K01184] [EC:3.2.1.15]
CICLE_v10033386mg  hypothetical protein [KO:K01184] [EC:3.2.1.15]
CICLE_v10027137mg  hypothetical protein [KO:K01184] [EC:3.2.1.15]
CICLE_v10023712mg  hypothetical protein [KO:K01213] [EC:3.2.1.67]
CICLE_v10033716mg  hypothetical protein [KO:K01213] [EC:3.2.1.67]
CICLE_v10004345mg  hypothetical protein [KO:K01213] [EC:3.2.1.67]
CICLE_v10006970mg  hypothetical protein [KO:K01213] [EC:3.2.1.67]
CICLE_v10015423mg  hypothetical protein [KO:K01213] [EC:3.2.1.67]
CICLE_v10017883mg  hypothetical protein [KO:K01213] [EC:3.2.1.67]
CICLE_v10030302mg  hypothetical protein [KO:K01213] [EC:3.2.1.67]
CICLE_v10023493mg  hypothetical protein [KO:K01213] [EC:3.2.1.67]
CICLE_v10015593mg  hypothetical protein [KO:K16190] [EC:2.7.1.43]
CICLE_v10000592mg  hypothetical protein [KO:K12447] [EC:2.7.7.64]
CICLE_v10011622mg  hypothetical protein [KO:K00012] [EC:1.1.1.22]
CICLE_v10019935mg  hypothetical protein [KO:K00012] [EC:1.1.1.22]
CICLE_v10031390mg  hypothetical protein [KO:K00012] [EC:1.1.1.22]
CICLE_v10023278mg  hypothetical protein [KO:K00963] [EC:2.7.7.9]
CICLE_v10011657mg  hypothetical protein [KO:K00963] [EC:2.7.7.9]
CICLE_v10013844mg  hypothetical protein [KO:K00002] [EC:1.1.1.2]
CICLE_v10013858mg  hypothetical protein [KO:K00002] [EC:1.1.1.2]
CICLE_v10005227mg  hypothetical protein [KO:K00002] [EC:1.1.1.2]
CICLE_v10012242mg  hypothetical protein [KO:K00002] [EC:1.1.1.2]
CICLE_v10012243mg  hypothetical protein [KO:K00002] [EC:1.1.1.2]
CICLE_v10012267mg  hypothetical protein [KO:K00002] [EC:1.1.1.2]
CICLE_v10016576mg  hypothetical protein [KO:K01783] [EC:5.1.3.1]
CICLE_v10021564mg  hypothetical protein [KO:K01783] [EC:5.1.3.1]
CICLE_v10000739mg  hypothetical protein [KO:K00854] [EC:2.7.1.17]
CICLE_v10008154mg  hypothetical protein [KO:K01805] [EC:5.3.1.5]
CICLE_v10005448mg  hypothetical protein [KO:K00008] [EC:1.1.1.14]
CICLE_v10007754mg  hypothetical protein [KO:K00875] [EC:2.7.1.47]
CICLE_v100283022m  hypothetical protein [KO:K22935] [EC:2.7.1.47]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
cic00010  Glycolysis / Gluconeogenesis
cic00020  Citrate cycle (TCA cycle)
cic00030  Pentose phosphate pathway
cic00052  Galactose metabolism
cic00053  Ascorbate and aldarate metabolism
cic00500  Starch and sucrose metabolism
cic00520  Amino sugar and nucleotide sugar metabolism
cic00561  Glycerolipid metabolism
cic00562  Inositol phosphate metabolism
cic00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

DBGET integrated database retrieval system