KEGG   PATHWAY: osa00970
Entry
osa00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Oryza sativa japonica (Japanese rice)
Class
Genetic Information Processing; Translation
Pathway map
osa00970  Aminoacyl-tRNA biosynthesis
osa00970

Organism
Oryza sativa japonica (Japanese rice) [GN:osa]
Gene
107276265  [KO:K01866] [EC:6.1.1.1]
136351124  [KO:K01866] [EC:6.1.1.1]
3131339  trnK; tRNA-Lys [KO:K14229]
3131340  OrsajCt122; tRNA-Gln [KO:K14223]
3131341  OrsajCt123; tRNA-Ser [KO:K14233]
3131342  OrsajCt124; tRNA-Ser [KO:K14233]
3131343  OrsajCt125; tRNA-Gly [KO:K14225]
3131344  OrsajCt127; tRNA-Met [KO:K14230]
3131346  OrsajCt130; tRNA-Thr [KO:K14234]
3131347  OrsajCt132; tRNA-Glu [KO:K14224]
3131348  OrsajCt133; tRNA-Tyr [KO:K14236]
3131349  OrsajCt134; tRNA-Asp [KO:K14221]
3131350  OrsajCt135; tRNA-Cys [KO:K14222]
3131351  OrsajCt136; tRNA-Arg [KO:K14219]
3131352  OrsajCt137; tRNA-Ser [KO:K14233]
3131353  OrsajCt138; tRNA-Thr [KO:K14234]
3131354  OrsajCt139; tRNA-Leu [KO:K14228]
3131355  OrsajCt140; tRNA-Phe [KO:K14231]
3131357  OrsajCt142; tRNA-Met [KO:K14230]
3131358  OrsajCt143; tRNA-Trp [KO:K14235]
3131359  OrsajCt144; tRNA-Pro [KO:K14232]
3131360  OrsajCt145; tRNA-His [KO:K14226]
3131361  OrsajCt146; tRNA-Ile [KO:K14230]
3131362  OrsajCt147; tRNA-Leu [KO:K14228]
3131363  OrsajCt148; tRNA-Val [KO:K14237]
3131365  OrsajCt149; tRNA-Ile [KO:K14227]
3131366  OrsajCt150; tRNA-Ala [KO:K14218]
3131370  OrsajCt151; tRNA-Arg [KO:K14219]
3131371  OrsajCt152; tRNA-Asn [KO:K14220]
3131372  OrsajCt153; tRNA-Leu [KO:K14228]
3131373  OrsajCt154; tRNA-Asn [KO:K14220]
3131374  OrsajCt155; tRNA-Arg [KO:K14219]
3131378  OrsajCt156; tRNA-Ala [KO:K14218]
3131379  OrsajCt157; tRNA-Ile [KO:K14227]
3131381  OrsajCt158; tRNA-Val [KO:K14237]
3131382  OrsajCt159; tRNA-Leu [KO:K14228]
3131383  OrsajCt160; tRNA-Ile [KO:K14230]
3131384  OrsajCt161; tRNA-His [KO:K14226]
4324056  [KO:K01887] [EC:6.1.1.19]
4324118  [KO:K00604] [EC:2.1.2.9]
4324505  [KO:K01876] [EC:6.1.1.12]
4324679  [KO:K01875] [EC:6.1.1.11]
4325167  [KO:K01885] [EC:6.1.1.17]
4325653  [KO:K01886] [EC:6.1.1.18]
4325717  [KO:K01893] [EC:6.1.1.22]
4326033  [KO:K01869] [EC:6.1.1.4]
4326551  [KO:K01867] [EC:6.1.1.2]
4328118  [KO:K01885] [EC:6.1.1.17]
4328255  [KO:K22503] [EC:6.1.1.12]
4329580  [KO:K01868] [EC:6.1.1.3]
4330025  [KO:K04567] [EC:6.1.1.6]
4330354  [KO:K22503] [EC:6.1.1.12]
4330562  [KO:K01866] [EC:6.1.1.1]
4330767  [KO:K01892] [EC:6.1.1.21]
4330908  [KO:K01870] [EC:6.1.1.5]
4332018  [KO:K01874] [EC:6.1.1.10]
4332758  [KO:K01873] [EC:6.1.1.9]
4333345  LysRS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
4333591  GATC; glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [KO:K02435] [EC:6.3.5.6 6.3.5.7]
4333799  [KO:K01873] [EC:6.1.1.9]
4335708  [KO:K01880] [EC:6.1.1.14]
4337177  [KO:K02433] [EC:6.3.5.6 6.3.5.7]
4337830  HisRS; histidine--tRNA ligase, cytoplasmic [KO:K01892] [EC:6.1.1.21]
4337898  [KO:K01887] [EC:6.1.1.19]
4337996  [KO:K01886] [EC:6.1.1.18]
4339585  [KO:K01890] [EC:6.1.1.20]
4339847  [KO:K14164] [EC:6.1.1.14]
4341140  MetRS; probable methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
4342467  [KO:K01873] [EC:6.1.1.9]
4342480  [KO:K01881] [EC:6.1.1.15]
4343250  [KO:K01893] [EC:6.1.1.22]
4344270  [KO:K01866] [EC:6.1.1.1]
4344663  [KO:K01866] [EC:6.1.1.1]
4344859  [KO:K01866] [EC:6.1.1.1]
4345200  [KO:K01868] [EC:6.1.1.3]
4346171  [KO:K01880] [EC:6.1.1.14]
4346920  [KO:K01869] [EC:6.1.1.4]
4347497  [KO:K01869] [EC:6.1.1.4]
4347821  [KO:K01883] [EC:6.1.1.16]
4348211  [KO:K01872] [EC:6.1.1.7]
4348464  [KO:K01885] [EC:6.1.1.17]
4348562  [KO:K01874] [EC:6.1.1.10]
4348566  [KO:K01889] [EC:6.1.1.20]
4348825  [KO:K01883] [EC:6.1.1.16]
4350686  GATB; glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
4350906  [KO:K01875] [EC:6.1.1.11]
4352065  [KO:K01893] [EC:6.1.1.22]
4352148  [KO:K01881] [EC:6.1.1.15]
4352408  [KO:K01889] [EC:6.1.1.20]
4352435  [KO:K01867] [EC:6.1.1.2]
6450125  trnW; tRNA-Trp [KO:K14235]
6450127  trnM; tRNA-Met [KO:K14230]
6450129  trnY; tRNA-Tyr [KO:K14236]
6450131  trnS; tRNA-Ser [KO:K14233]
6450141  trnP; pseudogene [KO:K14232]
6450153  trnS; tRNA-Ser [KO:K14233]
6450158  trnfM; tRNA-Met [KO:K14230]
6450160  trnE; tRNA-Glu [KO:K14224]
6450163  trnR; tRNA-Arg [KO:K14219]
6450165  trnH; tRNA-His [KO:K14226]
6450176  trnC; tRNA-Cys [KO:K14222]
6450184  trnI; tRNA-Ile [KO:K14230]
6450186  trnQ; tRNA-Gln [KO:K14223]
6450187  trnM; tRNA-Met [KO:K14230]
6450188  trnF; tRNA-Phe [KO:K14231]
6450190  trnD; tRNA-Asp [KO:K14221]
6450194  trnP; tRNA-Pro [KO:K14232]
6450199  trnS; tRNA-Ser [KO:K14233]
9266147  [KO:K01872] [EC:6.1.1.7]
9267455  [KO:K01873] [EC:6.1.1.9]
9269094  [KO:K01866] [EC:6.1.1.1]
9270000  [KO:K01883] [EC:6.1.1.16]
9270869  [KO:K01870] [EC:6.1.1.5]
9271247  [KO:K01866] [EC:6.1.1.1]
9272464  [KO:K01870] [EC:6.1.1.5]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
osa00250  Alanine, aspartate and glutamate metabolism
osa00260  Glycine, serine and threonine metabolism
osa00270  Cysteine and methionine metabolism
osa00290  Valine, leucine and isoleucine biosynthesis
osa00300  Lysine biosynthesis
osa00330  Arginine and proline metabolism
osa00340  Histidine metabolism
osa00380  Tryptophan metabolism
osa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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