KEGG   PATHWAY: pret04350
Entry
pret04350                   Pathway                                
Name
TGF-beta signaling pathway - Poecilia reticulata (guppy)
Description
The transforming growth factor-beta (TGF-beta) family members, which include TGF-betas, activins and bone morphogenetic proteins (BMPs), are structurally related secreted cytokines found in species ranging from worms and insects to mammals. A wide spectrum of cellular functions such as proliferation, apoptosis, differentiation and migration are regulated by TGF-beta family members. TGF-beta family member binds to the Type II receptor and recruits Type I, whereby Type II receptor phosphorylates and activates Type I. The Type I receptor, in turn, phosphorylates receptor-activated Smads ( R-Smads: Smad1, Smad2, Smad3, Smad5, and Smad8). Once phosphorylated, R-Smads associate with the co-mediator Smad, Smad4, and the heteromeric complex then translocates into the nucleus. In the nucleus, Smad complexes activate specific genes through cooperative interactions with other DNA-binding and coactivator (or co-repressor) proteins.
Class
Environmental Information Processing; Signal transduction
Pathway map
pret04350  TGF-beta signaling pathway
pret04350

Other DBs
GO: 0007179
Organism
Poecilia reticulata (guppy) [GN:pret]
Gene
103456751  [KO:K06503]
103456810  [KO:K22687]
103456842  myc; myc proto-oncogene protein isoform X1 [KO:K04377]
103456909  [KO:K19383]
103457010  cul1; cullin-1 [KO:K03347]
103457337  grem1; gremlin-1 [KO:K23318]
103457427  acvr2a; activin receptor type-2A isoform X1 [KO:K04670] [EC:2.7.11.30]
103457593  [KO:K13377]
103457638  [KO:K16857]
103457781  [KO:K04668]
103457871  bmp2; bone morphogenetic protein 2 [KO:K21283]
103458004  hdac2; histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
103458472  [KO:K04675] [EC:2.7.11.30]
103458518  thbs1; thrombospondin-1 [KO:K16857]
103458528  [KO:K23318]
103458631  [KO:K06067] [EC:3.5.1.98]
103458754  bmp4; bone morphogenetic protein 4 [KO:K04662]
103458857  [KO:K17694]
103459051  tgfb3; transforming growth factor beta-3 [KO:K13377]
103459210  [KO:K04660]
103459217  [KO:K28359]
103459738  lemd3; inner nuclear membrane protein Man1 [KO:K19410]
103459979  skp1; S-phase kinase-associated protein 1 [KO:K03094]
103459981  ppp2ca; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [KO:K04382] [EC:3.1.3.16]
103460036  [KO:K04670] [EC:2.7.11.30]
103460136  [KO:K04667]
103460374  rbl1; retinoblastoma-like protein 1 [KO:K04681]
103460612  [KO:K22687]
103460619  [KO:K04377]
103460774  [KO:K04667]
103460903  tfr2; transferrin receptor protein 2 [KO:K23910]
103461684  acvr1c; activin receptor type-1C isoform X1 [KO:K13568] [EC:2.7.11.30]
103461685  acvr1; activin receptor type-1 [KO:K04675] [EC:2.7.11.30]
103461763  [KO:K04671] [EC:2.7.11.30]
103462080  fbn1; fibrillin-1 isoform X1 [KO:K06825]
103462100  [KO:K04677]
103462102  [KO:K23605]
103462144  neo1; neogenin isoform X1 [KO:K06766]
103462556  [KO:K04682]
103462627  thsd4; thrombospondin type-1 domain-containing protein 4 isoform X1 [KO:K23377]
103462656  rbl2; retinoblastoma-like protein 2 [KO:K04681]
103462700  [KO:K11644]
103463594  [KO:K04679]
103463636  amh; muellerian-inhibiting factor [KO:K04665]
103463666  [KO:K23096]
103464091  [KO:K04498] [EC:2.3.1.48]
103464233  [KO:K04377]
103464267  gdf5; growth/differentiation factor 5 [KO:K04664]
103464397  [KO:K22687]
103464412  sp1; transcription factor Sp1 isoform X1 [KO:K04684]
103464450  [KO:K04658]
103464479  [KO:K26257]
103464490  [KO:K26503]
103464866  [KO:K08121]
103464947  [KO:K19553]
103465082  [KO:K16621]
103465141  [KO:K04513]
103465171  [KO:K19558]
103465574  [KO:K04680]
103465886  tgfbr2; TGF-beta receptor type-2 isoform X1 [KO:K04388] [EC:2.7.11.30]
103465907  [KO:K17695]
103465950  sin3a; paired amphipathic helix protein Sin3a [KO:K11644]
103466010  [KO:K28359]
103466455  cdkn2b; cyclin-dependent kinase 4 inhibitor B [KO:K04685]
103466539  [KO:K23605]
103466541  smad6; mothers against decapentaplegic homolog 6 [KO:K04677]
103466641  rgma; repulsive guidance molecule A [KO:K23096]
103466817  e2f4; transcription factor E2F4 [KO:K04682]
103466964  ski; ski oncogene [KO:K26503]
103466989  [KO:K04513]
103467136  [KO:K04513]
103467352  [KO:K04675] [EC:2.7.11.30]
103467353  acvr1b; activin receptor type-1B [KO:K13567] [EC:2.7.11.30]
103467398  [KO:K04513]
103467436  [KO:K04513]
103467543  [KO:K08121]
103467591  [KO:K16621]
103468002  [KO:K26257]
103468459  rbx1; E3 ubiquitin-protein ligase RBX1 [KO:K03868] [EC:2.3.2.32]
103468460  [KO:K04498] [EC:2.3.1.48]
103468478  smurf1; E3 ubiquitin-protein ligase SMURF1 isoform X1 [KO:K04678] [EC:2.3.2.26]
103468522  [KO:K04678] [EC:2.3.2.26]
103469045  [KO:K04658]
103469111  [KO:K04371] [EC:2.7.11.24]
103469191  crebbp; CREB-binding protein isoform X1 [KO:K04498] [EC:2.3.1.48]
103469777  [KO:K04500]
103469996  fst; follistatin isoform X1 [KO:K04661]
103470200  [KO:K04501]
103470230  bmpr1b; bone morphogenetic protein receptor type-1B [KO:K13578] [EC:2.7.11.30]
103470287  [KO:K04666]
103470388  rgmb; RGM domain family member B [KO:K06847]
103470721  mapk1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
103470779  ppp2cb; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform isoform X2 [KO:K04382] [EC:3.1.3.16]
103471035  [KO:K16790]
103471098  [KO:K26316]
103471193  [KO:K04382] [EC:3.1.3.16]
103471312  smad1; mothers against decapentaplegic homolog 1 isoform X1 [KO:K04676]
103471446  tgfb2; transforming growth factor beta-2 [KO:K13376]
103471826  pitx2; pituitary homeobox 2 isoform X1 [KO:K04686]
103471952  smurf2; E3 ubiquitin-protein ligase SMURF2 isoform X1 [KO:K04678] [EC:2.3.2.26]
103472045  [KO:K06067] [EC:3.5.1.98]
103472136  [KO:K03156]
103472417  [KO:K04688] [EC:2.7.11.1]
103472661  [KO:K04388] [EC:2.7.11.30]
103472966  bmp8a; bone morphogenetic protein 8A isoform X1 [KO:K16622]
103473219  [KO:K04679]
103473770  [KO:K13578] [EC:2.7.11.30]
103473773  [KO:K04501]
103473866  smad7; mothers against decapentaplegic homolog 7 [KO:K19631]
103473901  [KO:K04666]
103474116  bmpr2; bone morphogenetic protein receptor type-2 [KO:K04671] [EC:2.7.11.30]
103474395  [KO:K04688] [EC:2.7.11.1]
103474595  ppp2r1b; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [KO:K03456]
103474638  [KO:K21283]
103474909  chrd; chordin [KO:K04657]
103475119  [KO:K13375]
103475559  smad9; mothers against decapentaplegic homolog 9 [KO:K16791]
103476039  ncor1; nuclear receptor corepressor 1 isoform X2 [KO:K04650]
103476099  [KO:K04688] [EC:2.7.11.1]
103476291  [KO:K26316]
103476545  ltbp1; latent-transforming growth factor beta-binding protein 1 isoform X1 [KO:K19559]
103476722  grem2; gremlin-2 [KO:K23318]
103477006  bmp5; bone morphogenetic protein 5 isoform X1 [KO:K04663]
103477368  bmpr1a; bone morphogenetic protein receptor type-1A isoform X1 [KO:K04673] [EC:2.7.11.30]
103477474  [KO:K04501]
103477766  hamp; hepcidin [KO:K23106]
103478252  [KO:K20012]
103478259  [KO:K23106]
103478910  tmem53; transmembrane protein 53 [KO:K28359]
103479192  [KO:K06503]
103479600  [KO:K14736]
103479725  rock1; rho-associated protein kinase 1 [KO:K04514] [EC:2.7.11.39]
103479741  acvr2b; activin receptor type-2B [KO:K13596] [EC:2.7.11.30]
103479773  [KO:K21283]
103479806  [KO:K04682]
103479886  skil; ski-like protein [KO:K18499]
103479913  zfyve9; zinc finger FYVE domain-containing protein 9 [KO:K04679]
103480064  tfdp1; transcription factor Dp-1 [KO:K04683]
103481120  [KO:K04658]
103481460  nodal; nodal homolog [KO:K04666]
103481888  [KO:K04658]
103482005  [KO:K04498] [EC:2.3.1.48]
103482029  [KO:K21283]
103482297  [KO:K26317]
103482387  bambi; BMP and activin membrane-bound inhibitor homolog [KO:K10162]
103482409  [KO:K04674] [EC:2.7.11.30]
103482492  bmp6; bone morphogenetic protein 6 [KO:K16620]
108167002  [KO:K23100]
Compound
C14819  Fe3+
Reference
  Authors
Shi Y, Massague J.
  Title
Mechanisms of TGF-beta signaling from cell membrane to the nucleus.
  Journal
Cell 113:685-700 (2003)
DOI:10.1016/S0092-8674(03)00432-X
Reference
  Authors
Derynck R, Zhang YE.
  Title
Smad-dependent and Smad-independent pathways in TGF-beta family signalling.
  Journal
Nature 425:577-84 (2003)
DOI:10.1038/nature02006
Reference
  Authors
Massague J.
  Title
How cells read TGF-beta signals.
  Journal
Nat Rev Mol Cell Biol 1:169-78 (2000)
DOI:10.1038/35043051
Reference
  Authors
Siegel PM, Massague J.
  Title
Cytostatic and apoptotic actions of TGF-beta in homeostasis and cancer.
  Journal
Nat Rev Cancer 3:807-21 (2003)
DOI:10.1038/nrc1208
Reference
  Authors
Shimasaki S, Moore RK, Otsuka F, Erickson GF.
  Title
The bone morphogenetic protein system in mammalian reproduction.
  Journal
Endocr Rev 25:72-101 (2004)
DOI:10.1210/er.2003-0007
Reference
  Authors
De Robertis EM, Larrain J, Oelgeschlager M, Wessely O.
  Title
The establishment of Spemann's organizer and patterning of the vertebrate embryo.
  Journal
Nat Rev Genet 1:171-81 (2000)
DOI:10.1038/35042039
Reference
  Authors
Gumienny TL, Padgett RW.
  Title
The other side of TGF-beta superfamily signal regulation: thinking outside the cell.
  Journal
Trends Endocrinol Metab 13:295-9 (2002)
DOI:10.1016/S1043-2760(02)00615-X
Reference
  Authors
Hamada H, Meno C, Watanabe D, Saijoh Y.
  Title
Establishment of vertebrate left-right asymmetry.
  Journal
Nat Rev Genet 3:103-13 (2002)
DOI:10.1038/nrg732
Reference
  Authors
Chang H, Brown CW, Matzuk MM.
  Title
Genetic analysis of the mammalian transforming growth factor-beta superfamily.
  Journal
Endocr Rev 23:787-823 (2002)
DOI:10.1210/er.2002-0003
Reference
  Authors
Morita K, Chow KL, Ueno N.
  Title
Regulation of body length and male tail ray pattern formation of Caenorhabditis elegans by a member of TGF-beta family.
  Journal
Development 126:1337-47 (1999)
Reference
PMID:9847239
  Authors
Krishna S, Maduzia LL, Padgett RW.
  Title
Specificity of TGFbeta signaling is conferred by distinct type I receptors and their associated SMAD proteins in Caenorhabditis elegans.
  Journal
Development 126:251-60 (1999)
Reference
  Authors
Chen Y, Mironova E, Whitaker LL, Edwards L, Yost HJ, Ramsdell AF.
  Title
ALK4 functions as a receptor for multiple TGF beta-related ligands to regulate left-right axis determination and mesoderm induction in Xenopus.
  Journal
Dev Biol 268:280-94 (2004)
DOI:10.1016/j.ydbio.2003.12.035
Reference
  Authors
Onichtchouk D, Chen YG, Dosch R, Gawantka V, Delius H, Massague J, Niehrs C
  Title
Silencing of TGF-beta signalling by the pseudoreceptor BAMBI.
  Journal
Nature 401:480-5 (1999)
DOI:10.1038/46794
Reference
  Authors
Yan X, Lin Z, Chen F, Zhao X, Chen H, Ning Y, Chen YG
  Title
Human BAMBI cooperates with Smad7 to inhibit transforming growth factor-beta signaling.
  Journal
J Biol Chem 284:30097-104 (2009)
DOI:10.1074/jbc.M109.049304
Reference
PMID:8093006
  Authors
Hildebrand A, Romaris M, Rasmussen LM, Heinegard D, Twardzik DR, Border WA, Ruoslahti E
  Title
Interaction of the small interstitial proteoglycans biglycan, decorin and fibromodulin with transforming growth factor beta.
  Journal
Biochem J 302 ( Pt 2):527-34 (1994)
DOI:10.1042/bj3020527
Reference
  Authors
Soo C, Hu FY, Zhang X, Wang Y, Beanes SR, Lorenz HP, Hedrick MH, Mackool RJ, Plaas A, Kim SJ, Longaker MT, Freymiller E, Ting K
  Title
Differential expression of fibromodulin, a transforming growth factor-beta modulator, in fetal skin development and scarless repair.
  Journal
Am J Pathol 157:423-33 (2000)
DOI:10.1016/s0002-9440(10)64555-5
Reference
  Authors
Anderson GJ, Frazer DM
  Title
Iron metabolism meets signal transduction.
  Journal
Nat Genet 38:503-4 (2006)
DOI:10.1038/ng0506-503
Reference
  Authors
Canali S, Core AB, Zumbrennen-Bullough KB, Merkulova M, Wang CY, Schneyer AL, Pietrangelo A, Babitt JL
  Title
Activin B Induces Noncanonical SMAD1/5/8 Signaling via BMP Type I Receptors in Hepatocytes: Evidence for a Role in Hepcidin Induction by Inflammation in Male Mice.
  Journal
Endocrinology 157:1146-62 (2016)
DOI:10.1210/en.2015-1747
Reference
  Authors
Ganz T, Nemeth E
  Title
Iron homeostasis in host defence and inflammation.
  Journal
Nat Rev Immunol 15:500-10 (2015)
DOI:10.1038/nri3863
Reference
  Authors
Babitt JL, Zhang Y, Samad TA, Xia Y, Tang J, Campagna JA, Schneyer AL, Woolf CJ, Lin HY
  Title
Repulsive guidance molecule (RGMa), a DRAGON homologue, is a bone morphogenetic protein co-receptor.
  Journal
J Biol Chem 280:29820-7 (2005)
DOI:10.1074/jbc.M503511200
Reference
  Authors
Samad TA, Rebbapragada A, Bell E, Zhang Y, Sidis Y, Jeong SJ, Campagna JA, Perusini S, Fabrizio DA, Schneyer AL, Lin HY, Brivanlou AH, Attisano L, Woolf CJ
  Title
DRAGON, a bone morphogenetic protein co-receptor.
  Journal
J Biol Chem 280:14122-9 (2005)
DOI:10.1074/jbc.M410034200
Reference
  Authors
Vogt AS, Arsiwala T, Mohsen M, Vogel M, Manolova V, Bachmann MF
  Title
On Iron Metabolism and Its Regulation.
  Journal
Int J Mol Sci 22:ijms22094591 (2021)
DOI:10.3390/ijms22094591
Reference
  Authors
Ikushima H, Miyazono K
  Title
TGFbeta signalling: a complex web in cancer progression.
  Journal
Nat Rev Cancer 10:415-24 (2010)
DOI:10.1038/nrc2853
Reference
  Authors
Wu M, Wu S, Chen W, Li YP
  Title
The roles and regulatory mechanisms of TGF-beta and BMP signaling in bone and cartilage development, homeostasis and disease.
  Journal
Cell Res 34:101-123 (2024)
DOI:10.1038/s41422-023-00918-9
Related
pathway
pret04010  MAPK signaling pathway
pret04110  Cell cycle
pret04120  Ubiquitin mediated proteolysis
pret04210  Apoptosis
KO pathway
ko04350   

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