| Entry: | cput:CONPUDRAFT_101375 (418 a.a.) |
|---|---|
| Name: | insert subdomain of RNA polymerase alpha subunit |
| KO: | K03011 DNA-directed RNA polymerase II subunit RPB3 |
Search Result : 177 hits (reference genome only)
Entry KO len SW-score identity overlap ------------------------------------------------------------------ ------------------------------------- yli:2907933 DNA-directed RNA polymerase II subunit RPB3 K03011 322 1028 0.472 343 uma:UMAG_03550 hypothetical protein K03011 329 1019 0.484 318 cne:CNE05120 RNA polymerase II subunit 3, putative K03011 377 1014 0.463 361 kla:KLLA0_D16170g uncharacterized protein K03011 307 991 0.487 320 cal:CAALFM_C405630WA DNA-directed RNA polymerase II cor K03011 318 966 0.462 340 aor:AO090026000333 unnamed protein product; RNA polymer K03011 342 946 0.436 351 spo:2538816 DNA-directed RNA polymerase II complex subu K03011 297 946 0.502 291 afm:AFUA_2G13090 RNA polymerase II subunit 3 K03011 392 945 0.450 327 ani:ANIA_06252 DNA-directed RNA polymerase II core subu K03011 333 938 0.424 344 sce:YIL021W DNA-directed RNA polymerase II core subunit K03011 318 936 0.470 328 tre:TRIREDRAFT_78726 hypothetical protein K03011 375 929 0.406 389 ncr:NCU01515 DNA-directed RNA polymerase II polypeptide K03011 337 914 0.419 358 ppa:PAS_chr4_0344 RNA polymerase II third largest subun K03011 304 909 0.460 324 fvr:FVEG_09529 DNA-directed RNA polymerase II subunit R K03011 422 905 0.425 353 fgr:FGSG_01447 DNA-directed RNA polymerase II 33 kDa po K03011 337 893 0.430 356 maj:MAA_01802 hypothetical protein K03011 362 889 0.409 372 mgr:MGG_03215 DNA-directed RNA polymerase II subunit RP K03011 330 882 0.422 351 ola:101167955 DNA-directed RNA polymerase II subunit RP K03011 275 778 0.450 289 mdo:100016249 RNA polymerase II subunit C K03011 275 778 0.439 289 dre:334669 DNA-directed RNA polymerase II subunit RPB3 K03011 275 776 0.443 287 cjc:100413281 DNA-directed RNA polymerase II subunit RP K03011 275 775 0.437 286 hsa:5432 DNA-directed RNA polymerase II subunit RPB3 K03011 275 775 0.437 286 mcc:704555 DNA-directed RNA polymerase II subunit RPB3 K03011 275 775 0.437 286 ptr:454119 DNA-directed RNA polymerase II subunit RPB3 K03011 275 775 0.437 286 xtr:394729 DNA-directed RNA polymerase II subunit RPB3 K03011 275 774 0.436 291 cge:100765460 DNA-directed RNA polymerase II subunit RP K03011 275 773 0.437 286 ssc:100620737 DNA-directed RNA polymerase II subunit RP K03011 275 773 0.433 289 mmu:20021 DNA-directed RNA polymerase II subunit RPB3 K03011 275 773 0.437 286 rno:361365 DNA-directed RNA polymerase II subunit RPB3 K03011 275 773 0.437 286 amj:102573717 RNA polymerase II subunit C K03011 275 772 0.440 291 gga:415635 DNA-directed RNA polymerase II subunit RPB3 K03011 275 772 0.444 293 cpoc:100723100 DNA-directed RNA polymerase II subunit R K03011 275 771 0.437 286 oas:101102329 DNA-directed RNA polymerase II subunit RP K03011 275 771 0.437 286 fca:101091577 DNA-directed RNA polymerase II subunit RP K03011 275 771 0.437 286 tgu:100190236 DNA-directed RNA polymerase II subunit RP K03011 275 771 0.436 291 ecb:100052195 DNA-directed RNA polymerase II subunit RP K03011 275 771 0.437 286 cfa:478109 DNA-directed RNA polymerase II subunit RPB3 K03011 275 771 0.437 286 bta:504452 DNA-directed RNA polymerase II subunit RPB3 K03011 275 771 0.437 286 apla:101795720 DNA-directed RNA polymerase II subunit R K03011 275 769 0.440 293 tru:101068752 DNA-directed RNA polymerase II subunit RP K03011 275 769 0.436 289 xla:432060 polymerase (RNA) II (DNA directed) polypepti K03011 275 767 0.433 291 rfq:117034812 DNA-directed RNA polymerase II subunit RP K03011 275 763 0.434 286 ocu:100346702 DNA-directed RNA polymerase II subunit RP K03011 275 762 0.434 286 spu:575987 DNA-directed RNA polymerase II subunit RPB3 K03011 275 760 0.433 277 pmur:107295249 DNA-directed RNA polymerase II subunit R K03011 275 755 0.435 276 aag:5571035 DNA-directed RNA polymerase II subunit RPB3 K03011 275 750 0.409 286 ptex:113445358 DNA-directed RNA polymerase II subunit R K03011 275 746 0.431 276 tca:659215 DNA-directed RNA polymerase II subunit RPB3 K03011 274 746 0.411 287 dme:Dmel_CG7885 RNA polymerase II subunit C K03011 275 743 0.406 286 nve:5508035 DNA-directed RNA polymerase II subunit RPB3 K03011 274 739 0.451 273 bmor:732923 DNA-directed RNA polymerase II polypeptide K03011 275 736 0.411 287 ame:552458 DNA-directed RNA polymerase II subunit RPB3 K03011 276 730 0.388 286 cin:100177395 DNA-directed RNA polymerase II subunit RP K03011 319 728 0.432 280 cel:CELE_C36B1.3 DNA-directed RNA polymerase RpoA/D/Rpb K03011 282 723 0.418 280 aga:1278625 DNA-directed RNA polymerase II subunit RPB3 K03011 273 712 0.391 281 clv:102098922 DNA-directed RNA polymerase II subunit RP K03011 254 704 0.445 272 dne:112985424 DNA-directed RNA polymerase II subunit RP K03011 285 703 0.449 272 smm:Smp_099170 DNA-directed rna polymerase II subunit,p K03011 266 694 0.414 285 ppp:112291047 DNA-directed RNA polymerases II, IV and V K03011 324 606 0.336 327 cit:102612811 DNA-directed RNA polymerases II, IV and V K03011 319 602 0.385 283 mdm:103436450 DNA-directed RNA polymerases II, IV and V K03011 318 599 0.341 334 smo:SELMODRAFT_75337 hypothetical protein K03011 320 595 0.335 334 vvi:100258926 DNA-directed RNA polymerases II, IV and V K03011 318 595 0.347 334 csv:101218763 DNA-directed RNA polymerases II, IV and V K03011 320 593 0.339 339 gmx:100792565 DNA-directed RNA polymerases II, IV and V K03011 319 585 0.335 325 osa:4346392 DNA-directed RNA polymerases II, IV and V s K03011 330 584 0.355 318 sot:102598724 DNA-directed RNA polymerases II, IV and V K03011 319 576 0.339 339 zma:100282883 uncharacterized protein LOC100282883 K03011 328 575 0.353 326 sly:101248675 DNA-directed RNA polymerases II, IV and V K03011 319 572 0.333 339 nta:107789704 DNA-directed RNA polymerases II, IV and V K03011 318 570 0.375 293 mtr:11444055 DNA-directed RNA polymerases II, IV and V K03011 318 570 0.332 334 rcu:8288139 DNA-directed RNA polymerases II, IV and V s K03011 318 569 0.366 309 ddi:DDB_G0292244 RNA polymerase II core subunit K03011 302 566 0.341 302 ath:AT2G15430 DNA-directed RNA polymerase family protei K03011 319 542 0.442 197 ecu:ECU06_0600 DNA-directed RNA polymerase II core subu K03011 240 536 0.357 269 cre:CHLRE_10g419750v5 uncharacterized protein K03011 372 497 0.304 385 pif:PITG_18113 DNA-directed RNA polymerase II 36 kDa po K03011 241 474 0.378 217 pti:PHATRDRAFT_13566 hypothetical protein K03011 320 455 0.301 322 tgo:7893924 DNA-directed RNA polymerase II RPB3 484 452 0.341 246 tva:4757906 DNA-directed 5'-3' RNA polymerase protein K03011 322 426 0.320 306 pfa:PF3D7_0923000 DNA-directed RNA polymerase II subuni K03011 335 401 0.302 298 tps:THAPSDRAFT_16440 RP3A,-like protein to dna-directed K03011 297 398 0.285 302 tcr:508409.30 DNA-directed RNA polymerase II subunit 3 K03011 363 374 0.306 307 lma:LMJF_29_0140 DNA-directed RNA polymerase I-like pro K03011 337 351 0.324 213 tbr:Tb927.3.5500 DNA-directed RNA polymerase II subunit K03011 337 344 0.326 187 pto:PTO1222 DNA-directed RNA polymerase subunit D K03047 271 329 0.292 301 mth:MTH_37 DNA-dependent RNA polymerase, subunit D K03047 264 327 0.273 286 ehi:EHI_178010 DNA-directed RNA polymerase II subunit K03011 283 312 0.284 306 mmg:MTBMA_c05260 DNA-directed RNA polymerase, subunit D K03047 264 298 0.268 291 pab:PAB2410 rpoD DNA-directed RNA polymerase, subunit D K03047 259 296 0.317 300 afu:AF_2282 DNA-directed RNA polymerase, subunit D (rpo K03047 264 294 0.293 283 mse:Msed_2145 DNA-directed RNA polymerase, subunit D K03047 262 293 0.263 285 gla:GL50803_007474 DNA-directed RNA polymerase RPB3 K03011 326 286 0.306 196 nmr:Nmar_0428 RNA polymerase insert K03047 221 285 0.328 180 pfu:PF1647 DNA-directed RNA polymerase subunit d K03047 261 285 0.305 295 sto:STK_20670 DNA-directed RNA polymerase subunit D K03047 264 284 0.271 284 pho:PH1637 261aa long hypothetical DNA-directed RNA pol K03047 261 281 0.316 294 tko:TK1503 DNA-directed RNA polymerase, subunit D K03047 259 280 0.295 281 vg:80520228 Tetraselmis virus 1; DNA-directed RNA polym 369 275 0.260 289 sai:Saci_0083 DNA-directed RNA polymerase subunit D K03047 264 275 0.284 275 ban:BA_0397 LPXTG-motif cell wall anchor domain protein 257 273 0.400 120 xfa:XF_0818 endo-1,4-beta-glucanase K01179 592 271 0.403 124 btk:BT9727_0374 surface protein, pentapeptide repeat do 342 266 0.376 125 pai:PAE0671 DNA-directed RNA polymerase subunit D (rpoD K03047 260 266 0.328 177 mtu:Rv3511 PE-PGRS family protein PE_PGRS55 714 266 0.398 123 mmi:MMAR_0943 PE-PGRS family protein 1425 265 0.397 146 scl:sce8575 PE-PGRS family protein 870 261 0.395 124 mul:MUL_1721 PE_PGRS family protein 461 260 0.404 151 bce:BC0440 surface protein 340 260 0.376 125 mtc:MT1096.1 PE_PGRS family protein 667 260 0.386 127 amd:AMED_4182 hypothetical protein 1106 257 0.363 146 ape:APE_1744.1 DNA-directed RNA polymerase subunit D K03047 286 256 0.276 203 sur:STAUR_8134 uncharacterized protein 369 252 0.341 132 mva:Mvan_1264 Collagen triple helix repeat 796 251 0.421 114 mma:MM_2158 DNA-directed RNA polymerase subunit D K03047 266 249 0.272 287 pma:Pro_0013 RNA-binding protein, RRM domain 252 248 0.380 129 tac:Ta1030 DNA-dependent RNA polymerase, subunit D rela K03047 271 246 0.247 299 sgu:SGLAU_29265 putative secreted protein 295 242 0.345 148 bps:BPSL0892a putative lipoprotein 528 240 0.397 116 ava:Ava_D0002 PE-PGRS family protein 273 238 0.356 160 pjd:Pjdr2_5976 Peptidoglycan-binding domain 1 protein 336 237 0.435 115 bxe:Bxe_A0786 Putative lipoprotein 351 236 0.398 118 msm:MSMEG_3202 hypothetical protein 506 235 0.389 131 bma:BMA2255 lipoprotein, putative 512 235 0.375 112 mba:Mbar_A0075 DNA-directed RNA polymerase, subunit D K03047 266 234 0.284 190 bja:blr1360 ORF_ID:blr1360; hypothetical protein 413 234 0.342 146 sno:Snov_2670 outer membrane autotransporter barrel dom 2166 233 0.371 132 ase:ACPL_679 Collagen alpha-5(VI) chain 251 231 0.411 112 sme:SMc04236 Putative glycine-rich cell wall structural 250 230 0.377 130 reh:H16_B0055 Glycine-rich protein 504 229 0.389 131 sct:SCAT_3473 putative Calcium/calmodulin-dependent pro 632 228 0.371 105 mlo:mlr4566 glycine-rich cell wall protein 243 228 0.341 126 sgr:SGR_3921 hypothetical protein 835 226 0.359 145 eba:ebA4680 hypothetical protein, INTERPRO suggestion: 452 226 0.378 127 kfl:Kfla_6991 hypothetical protein 542 225 0.331 157 tde:TDE_2694 conserved hypothetical protein 740 225 0.305 239 sshi:J5U23_00176 DNA-directed RNA polymerase subunit D K03047 265 221 0.237 295 sso:SSO0071 DNA-directed RNA polymerase, subunit D (rpo K03047 265 221 0.234 295 ksk:KSE_57510 putative ribosomal large subunit pseudour K06178 428 219 0.391 115 mab:MAB_1280c Hypothetical protein 430 219 0.343 172 syn:slr1403 integrin alpha- and beta4- subunit domain h 3016 218 0.347 121 mja:MJ_0192 DNA-directed RNA polymerase, subunit D (rpo K03047 191 215 0.281 192 sma:SAVERM_5290 putative integral membrane protein 775 213 0.353 150 ana:all2793 unknown protein 681 213 0.353 133 mca:MCA2928 hypothetical protein 253 212 0.370 127 mea:Mex_1p0030 putative General secretion pathway prote K02453 792 205 0.315 168 rha:RHA1_ro06630 conserved hypothetical protein 177 204 0.383 115 rpa:TX73_012520 BA14K family protein 209 202 0.330 109 dds:Ddes_0711 hypothetical protein 524 201 0.355 141 bhe:BH09250 hypothetical genomic island protein 642 200 0.352 128 hvo:HVO_2781 DNA-directed RNA polymerase subunit D K03047 259 196 0.276 261 aci:ACIAD2373 host factor I for bacteriophage Q beta re K03666 174 190 0.389 90 hal:VNG_1136G DNA-directed RNA polymerase II K03047 248 190 0.252 266 plu:plu3560 unnamed protein product; Highly similar to 431 185 0.339 124 hma:rrnAC0062 DNA-directed RNA polymerase subunit D K03047 259 182 0.270 270 acb:A1S_3785 hypothetical protein K03666 168 179 0.421 95 ccyc:SCMU_12130 hypothetical protein 103 175 0.375 112 mar:MAE_31340 hypothetical protein 70 173 0.523 44 mmp:MMP1322 DNA-directed RNA polymerase, subunit D K03047 180 173 0.263 228 sco:SCO3907 putative single-strand DNA-binding protein K03111 199 171 0.381 84 cro:ROD_p1441 colicin 516 167 0.425 80 cpy:Cphy_3823 hypothetical protein 535 162 0.247 170 sen:SACE_3019 PE-PGRS family protein 109 159 0.345 84 zmo:ZMO1920 hypothetical protein 139 157 0.391 92 anb:ANA_C20266 hypothetical protein 389 155 0.369 84 sml:Smlt0810 putative transmembrane protein K06872 297 153 0.511 45 gox:GOX0231 Hypothetical protein 158 152 0.444 54 npu:Npun_R6515 hypothetical protein 109 149 0.352 91 sjp:SJA_C1-10380 conserved hypothetical protein K06872 271 148 0.443 61 pdi:BDI_2795 putative lipoprotein 518 136 0.240 379 rle:pRL80094 putative solute-binding component of ABC t K02027 484 132 0.244 213 bha:BH0162 DNA-directed RNA polymerase alpha subunit K03040 314 129 0.215 284 atu:Atu4768 conserved hypothetical protein 145 127 0.311 119 rcp:RCAP_rcc00326 DNA-directed RNA polymerase, alpha su K03040 338 121 0.307 75 sao:SAOUHSC_02485 DNA-directed RNA polymerase subunit a K03040 314 119 0.211 284 sau:SA2023 DNA-directed RNA polymerase alpha chain K03040 314 119 0.211 284 gtn:GTNG_0131 DNA-directed RNA polymerase alpha chain K03040 314 118 0.211 284