SSDB Best Search Result

Entry:mtuc:J113_06570 (759 a.a.)
Name:ATP-dependent DNA ligase
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 223 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759     5111     1.000      759     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759     5100     0.999      759     
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770     4244     0.817      764     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770     4222     0.813      764     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763     3686     0.714      767     
msm:MSMEG_5570 DNA ligase                               K01971     755     3642     0.691      761     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750     3403     0.675      754     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758     2943     0.585      756     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766     2902     0.579      755     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808     2589     0.527      803     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812     2450     0.499      803     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899     2086     0.423      896     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836     1017     0.393      511     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851      954     0.362      530     
dsy:DSY0616 hypothetical protein                        K01971     818      940     0.363      509     
phe:Phep_1702 DNA ligase D                              K01971     877      932     0.352      532     
pae:PA2138 multifunctional non-homologous end joining p K01971     840      931     0.377      530     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910      926     0.381      551     
ase:ACPL_1154 DNA ligase (ATP)                          K01971     348      920     0.436      346     
reu:Reut_B4424 ATP-dependent DNA ligase LigD polymerase K01971     930      917     0.368      524     
cpy:Cphy_1729 DNA ligase D                              K01971     813      908     0.348      509     
atu:Atu4632 ATP-dependent DNA ligase                    K01971     771      903     0.367      539     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866      896     0.344      543     
nca:Noca_1237 ATP dependent DNA ligase                  K01971     304      885     0.521      288     
ssy:SLG_04290 putative DNA ligase                       K01971     835      873     0.350      543     
amd:AMED_5275 ATP-dependent DNA ligase                  K01971     355      872     0.426      359     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828      872     0.364      538     
sno:Snov_0819 DNA ligase D                              K01971     842      861     0.358      544     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900      858     0.328      588     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829      858     0.361      534     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868      856     0.354      512     
xcc:XCC0105 ATP-dependent DNA ligase                    K01971    1001      853     0.337      549     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843      850     0.347      550     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829      847     0.359      538     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865      843     0.346      540     
ppu:PP_3260 DNA ligase D                                K01971     833      840     0.341      525     
kfl:Kfla_5357 DNA polymerase LigD, polymerase domain pr K01971     308      828     0.461      293     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123      823     0.322      639     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001      820     0.323      606     
swi:Swit_3982 DNA ligase D                              K01971     837      816     0.346      544     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882      799     0.332      558     
stp:Strop_3967 DNA primase, small subunit               K01971     302      788     0.451      293     
rle:pRL120229 putative DNA ligase family protein        K01971     881      787     0.315      555     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892      784     0.323      573     
sct:SCAT_5459 conserved protein of unknown function     K01971     298      769     0.436      291     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872      766     0.315      537     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742      746     0.353      487     
xau:Xaut_4365 DNA ligase D                              K01971     886      741     0.305      551     
sen:SACE_3549 DNA ligase (ATP)                          K01971     302      736     0.436      298     
rpa:TX73_018915 DNA ligase D                            K01971     914      735     0.309      583     
sco:SCO7345 probable ATP-dependent DNA ligase.          K01971     326      732     0.434      320     
sma:SAVERM_2946 putative DNA ligase                     K01971     293      721     0.437      284     
sgr:SGR_6690 putative ATP-dependent DNA ligase          K01971     320      712     0.418      316     
sgu:SGLAU_02470 ATP-dependent DNA ligase                K01971     326      698     0.419      315     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159      664     0.306      673     
scl:sce3523 unnamed protein product; High confidence in K01971     762      601     0.393      313     
vg:26737567 Sinorhizobium phage phiLM21; non-homologous K01971     330      581     0.388      286     
mta:Moth_1488 ATP dependent DNA ligase, central                    320      568     0.362      309     
afu:AF_1725 DNA ligase, putative                        K01971     313      544     0.341      317     
sro:Sros_6714 DNA primase small subunit                            334      506     0.303      333     
det:DET0850 conserved hypothetical protein                         183      483     0.435      177     
chy:CHY_0025 conserved hypothetical protein             K01971     293      478     0.315      279     
mba:Mbar_A2115 conserved hypothetical protein                      151      477     0.520      148     
mac:MA_3428 conserved hypothetical protein                         156      474     0.497      157     
mma:MM_0209 hypothetical protein                                   152      453     0.490      153     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      425     0.271      314     
oih:OB3034 hypothetical conserved protein               K01971     595      419     0.296      277     
pde:Pden_4186 conserved hypothetical protein            K01971     330      413     0.311      257     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      412     0.271      314     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      409     0.292      305     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      406     0.288      278     
pfu:PF1635 DNA ligase (lig)                             K10747     561      403     0.318      330     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      401     0.295      308     
pab:PAB2002 lig DNA ligase                              K10747     559      400     0.307      332     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      399     0.307      332     
hal:VNG_0881G DNA ligase                                K10747     561      394     0.326      325     
hma:rrnAC0463 DNA ligase                                K10747     554      391     0.321      318     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      388     0.315      330     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      387     0.327      297     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      376     0.315      321     
pfl:PFL_6269 Hypothetical protein                       K01971     186      376     0.371      186     
ton:TON_1515 thermostable DNA ligase                    K10747     562      374     0.301      326     
hth:HTH_1466 DNA ligase                                            572      360     0.304      280     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      347     0.280      282     
tac:Ta1148 DNA ligase related protein                   K10747     588      332     0.301      286     
cne:CNI04170 DNA ligase, putative                       K10747     803      322     0.290      307     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      316     0.279      315     
pai:PAE0833 DNA ligase                                  K10747     584      305     0.277      303     
aae:aq_1394 DNA ligase (ATP dependent)                             585      303     0.280      300     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      302     0.267      352     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      299     0.289      294     
xom:XOO1771 DNA ligase                                             534      299     0.302      265     
fgr:FGSG_05453 DNA ligase                               K10747     867      296     0.277      368     
ncr:NCU06481 DNA ligase                                 K10747     923      294     0.282      294     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      294     0.288      306     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      290     0.292      312     
tva:5466150 DNA ligase 1/3 family member family                    679      287     0.283      290     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      286     0.267      359     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      285     0.278      306     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      285     0.273      315     
mgr:MGG_06370 DNA ligase 1                              K10747     896      282     0.278      370     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      282     0.269      334     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      280     0.275      327     
pmur:107285325 DNA ligase 1                             K10747     944      278     0.286      290     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      278     0.267      307     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      276     0.261      452     
yli:2908208 DNA ligase 1                                K10747     711      275     0.271      310     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      274     0.291      354     
ksk:KSE_05320 hypothetical protein                      K01971     173      274     0.318      173     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      274     0.309      285     
bmor:101739080 DNA ligase 1 isoform X1                  K10747     885      273     0.284      335     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      272     0.254      307     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      271     0.269      342     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      270     0.279      294     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      268     0.279      258     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      266     0.277      350     
cin:100181519 DNA ligase 1-like                         K10747    1060      264     0.275      349     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      262     0.259      328     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      262     0.282      354     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      262     0.257      303     
dre:556995 DNA ligase 1                                 K10747    1058      262     0.271      347     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      262     0.264      284     
cpoc:100734013 DNA ligase 1                             K10747     919      261     0.277      354     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      260     0.284      352     
mdm:103423359 DNA ligase 1-like                         K10747     796      260     0.291      285     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      258     0.284      296     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      258     0.284      352     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      258     0.284      352     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      258     0.265      268     
ola:101167483 DNA ligase 1                              K10747     993      257     0.277      347     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      256     0.280      350     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      256     0.284      352     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      255     0.275      305     
pto:PTO0672 DNA ligase                                  K10747     590      255     0.246      305     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      254     0.281      352     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      254     0.281      310     
smo:SELMODRAFT_119719 hypothetical protein                         638      252     0.275      353     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      252     0.284      352     
ssc:100520434 DNA ligase 1                              K10747     923      252     0.284      352     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      251     0.252      282     
cit:102618631 DNA ligase 6 isoform X1                             1402      251     0.276      330     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      250     0.278      352     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      250     0.278      291     
sto:STK_02230 DNA ligase                                K10747     600      250     0.273      286     
bta:100124507 DNA ligase 1                              K10747     916      249     0.278      352     
gmx:100803989 DNA ligase 1                                         701      247     0.282      340     
vvi:100266816 DNA ligase 6 isoform X1                             1449      247     0.256      332     
nve:5525240 DNA ligase 4                                K10777     903      247     0.266      338     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      246     0.278      352     
tps:THAPSDRAFT_268404 ligase                            K10747     633      246     0.278      353     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      246     0.267      281     
mmu:16881 DNA ligase 1                                  K10747     916      246     0.277      311     
rno:81513 DNA ligase 1                                  K10747     913      244     0.284      310     
xtr:100271763 DNA ligase 1                              K10747    1040      243     0.266      349     
dme:Dmel_CG5602 DNA ligase 1                                       747      242     0.285      277     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      241     0.276      290     
ani:ANIA_06069 hypothetical protein                     K10747     932      241     0.262      302     
sly:101249429 DNA ligase 6 isoform X1                             1441      239     0.272      290     
pti:PHATR_51005 hypothetical protein                    K10747     651      239     0.275      353     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      238     0.273      348     
zma:103651343 DNA ligase 6                                        1397      238     0.265      310     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      238     0.277      278     
xla:397978 DNA ligase 1                                 K10747    1070      237     0.266      349     
csv:101213447 DNA ligase 1                              K10747     801      236     0.284      285     
sot:102603887 DNA ligase 1                                        1441      235     0.269      290     
rcu:8265013 DNA ligase 6 isoform X1                               1394      235     0.258      330     
mdo:100616962 DNA ligase 1-like                                    632      235     0.291      265     
osa:9269006 putative DNA ligase 4                       K10777    1296      235     0.245      322     
mth:MTH_1580 DNA ligase                                 K10747     561      235     0.270      307     
tca:658633 DNA ligase                                   K10747     756      234     0.272      283     
pif:PITG_04614 DNA ligase, putative                                497      233     0.294      330     
dne:112995498 DNA ligase 1                              K10747     868      232     0.265      347     
mtr:11442607 DNA ligase 6 isoform X1                              1409      231     0.272      331     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      231     0.266      316     
ehi:EHI_111060 DNA ligase                               K10747     685      231     0.249      366     
amj:102566879 DNA ligase 1                              K10747     954      230     0.283      276     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      229     0.307      280     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      227     0.271      325     
tcr:506835.120 DNA ligase I                             K10747     701      227     0.258      345     
nta:107805422 DNA ligase 6 isoform X1                             1426      225     0.267      330     
tgo:7896565 DNA ligase 1, putative                                1331      223     0.252      309     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      222     0.259      355     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      221     0.281      299     
ath:AT1G08130 DNA ligase 1                              K10747     790      220     0.269      335     
ppp:112291880 DNA ligase 4                              K10777    1297      218     0.254      279     
tgu:100225693 DNA ligase 4                              K10777     911      204     0.234      337     
tru:101068311 DNA ligase 3                              K10776     998      199     0.243      259     
zga:ZOBELLIA_2113 DNA ligase                                       554      197     0.269      208     
clv:102093808 DNA ligase 4                              K10777     912      196     0.234      337     
smm:Smp_019840.1 DNA ligase I, putative                            783      196     0.259      316     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      189     0.256      273     
gla:GL50803_007649 DNA ligase (ATP)                                810      187     0.246      423     
vfi:VF_1450 DNA ligase                                  K26441     285      173     0.270      222     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      154     0.262      221     
ypk:y3628 UDP-N-acetylmuramoylalanine-D-glutamate ligas K01925     438      149     0.257      245     
ype:YPO0553 UDP-N-acetylmuramoylalanine--D-glutamate li K01925     438      149     0.257      245     
nme:NMB2048 DNA ligase                                  K26441     274      149     0.266      229     
ngo:NGO_2034 DNA ligase                                 K26441     274      148     0.266      229     
yps:YPTB0686 UDP-N-acetylmuramoylalanine-D-glutamate li K01925     438      148     0.257      245     
vpa:VP1477 DNA ligase                                   K26441     280      143     0.240      242     
son:SO_2204 DNA ligase ATP-dependent                    K26441     311      142     0.263      217     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      138     0.269      223     
ser:SERP1534 DNA ligase, ATP-dependent                             432      138     0.223      238     
ana:alr4863 unknown protein                                        999      136     0.243      276     
syp:SYNPCC7002_C0010 conserved hypothetical protein                641      134     0.285      151     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      134     0.261      241     
npu:Npun_R5457 conserved hypothetical protein                     1003      133     0.247      389     
vch:VC_1542 DNA ligase                                  K26441     282      133     0.264      227     
ava:Ava_2136 conserved hypothetical protein                        998      131     0.236      276     
enc:ECL_04855 3-oxoacyl-(acyl carrier protein) synthase K09458     409      128     0.247      190     
lil:LA_4078 apolipoprotein n-acyltransferase            K03820     609      126     0.270      159     
wsu:WS1795 conserved hypothetical protein-Xanthosine tr K01519     203      125     0.255      145     
pma:Pro_0070 Uncharacterized conserved protein                     126      117     0.274      95      
gtn:GTNG_1757 Xylose isomerase                          K01805     445      114     0.260      146     
bth:BT_3871 adenylosuccinate lyase                      K01756     448      113     0.226      261     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      113     0.293      82      
ral:Rumal_4013 hypothetical protein                                469      109     0.308      120     
fps:FP1066 Probable two-component system response regul            517      106     0.197      417     
neu:NE1224 hypothetical protein                                     87      101     0.292      96      
lin:pli0049 Transposase                                 K07498     226      100     0.250      112     
cac:CA_C1293 Uncharacterized conserved predicted metal- K07042     166      100     0.245      102     
fnu:FN0601 Hypothetical exported 24-amino acid repeat p            141       95     0.221      113     
bms:BR1867 hypothetical protein                                     48       81     0.375      40      

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