SSDB Best Search Result

Entry:puv:PUV_10690 (794 a.a.)
Name:putative DNA ligase-like protein Rv0938/MT0965
KO:K01971 bifunctional non-homologous end joining protein LigD

Search Result : 226 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
phe:Phep_1702 DNA ligase D                              K01971     877     2444     0.449      877     
pae:PA2138 multifunctional non-homologous end joining p K01971     840     1830     0.384      822     
sur:STAUR_6997 ATP dependent DNA ligase                 K01971     836     1783     0.382      844     
pst:PSPTO_3464 DNA ligase, ATP-dependent, putative      K01971     851     1781     0.384      830     
ppu:PP_3260 DNA ligase D                                K01971     833     1751     0.369      842     
cpy:Cphy_1729 DNA ligase D                              K01971     813     1749     0.367      820     
atu:Atu5055 ATP-dependent DNA ligase                    K01971     884     1740     0.369      890     
rle:pRL120229 putative DNA ligase family protein        K01971     881     1728     0.368      888     
mlo:mll4606 ATP-dependent DNA ligase                    K01971     829     1728     0.385      833     
psb:Psyr_3245 ATP-dependent DNA ligase LigD phosphoeste K01971     866     1724     0.369      869     
reu:Reut_B5079 ATP-dependent DNA ligase LigD phosphoest K01971     901     1711     0.357      852     
reh:H16_B2352 ATP-dependent DNA ligase                  K01971     910     1705     0.370      844     
ret:RHE_PE00252 putative ATP-dependent DNA ligase prote K01971     882     1691     0.360      886     
dsy:DSY0616 hypothetical protein                        K01971     818     1685     0.356      814     
sno:Snov_0819 DNA ligase D                              K01971     842     1663     0.375      837     
ssy:SLG_04290 putative DNA ligase                       K01971     835     1623     0.348      845     
xau:Xaut_4365 DNA ligase D                              K01971     886     1621     0.352      891     
bja:bll6773 ORF_ID:bll6773; probable DNA ligase         K01971     892     1601     0.357      873     
brh:RBRH_00476 ATP-dependent DNA ligase (EC 6.5.1.1)    K01971    1123     1579     0.355      843     
azc:AZC_1006 ATP-dependent DNA ligase                   K01971     900     1575     0.355      887     
sme:SMc03959 Probable ATP-dependent DNA ligase          K01971     865     1574     0.342      855     
rpa:TX73_018915 DNA ligase D                            K01971     914     1567     0.361      898     
sjp:SJA_C1-12900 ATP-dependent DNA ligase               K01971     829     1563     0.350      839     
swi:Swit_3982 DNA ligase D                              K01971     837     1562     0.348      850     
rsp:RSP_2679 ATP-dependent DNA ligase LigD polymerase m K01971     868     1533     0.323      867     
sml:Smlt0053 putative ATP-dependent DNA ligase          K01971     828     1518     0.342      838     
nar:Saro_1695 ATP-dependent DNA ligase LigD phosphoeste K01971     843     1512     0.338      856     
bxe:Bxe_A2328 ATP-dependent DNA ligase LigD phosphoeste K01971    1001     1471     0.319      975     
xcc:XCC2307 ATP-dependent DNA ligase                    K01971     849     1455     0.334      839     
xac:XAC2414 ATP-dependent DNA ligase                    K01971     872     1419     0.333      861     
eba:ebA6655 ATP-dependent DNA ligase                    K01971     742     1418     0.345      806     
scl:sce3523 unnamed protein product; High confidence in K01971     762     1256     0.352      647     
bps:BPSS2211 putative ATP-dependent DNA ligase          K01971    1159     1181     0.283      1105    
mmi:MMAR_4573 ATP dependent DNA ligase                  K01971     770     1007     0.394      492     
msm:MSMEG_5570 DNA ligase                               K01971     755     1002     0.380      490     
mul:MUL_4434 ATP dependent DNA ligase                   K01971     770      996     0.392      492     
rer:RER_45220 ATP-dependent DNA ligase LigD             K01971     758      983     0.382      497     
mtc:MT0965 conserved hypothetical protein/DNA ligase    K01971     759      982     0.388      495     
mtu:Rv0938 multifunctional non-homologous end joining D K01971     759      980     0.388      495     
rha:RHA1_ro05048 DNA ligase (ATP)                       K01971     766      976     0.356      497     
gpo:GPOL_c05170 putative ATP-dependent DNA ligase       K01971     812      975     0.392      469     
mva:Mvan_4915 ATP-dependent DNA ligase LigD ligase modu K01971     763      974     0.381      493     
amd:AMED_3255 ATP-dependent DNA ligase                  K01971     670      961     0.304      662     
mab:MAB_1033 Putative ATP-dependent DNA ligase          K01971     750      961     0.362      494     
bpf:BpOF4_18445 ATP-dependent DNA ligase                K01971     578      905     0.320      597     
sen:SACE_4181 ATP dependent DNA ligase                  K01971     647      891     0.290      791     
ccyc:SCMU_35490 ATP-dependent DNA ligase                K01971     899      878     0.344      535     
bha:BH2209 BH2209; unknown conserved protein            K01971     611      878     0.304      612     
nfa:NFA_6770 putative ATP-dependent DNA ligase          K01971     808      869     0.341      507     
bsu:BSU13400 ATP-dependent DNA ligase YkoU              K01971     611      837     0.297      612     
mta:Moth_2082 conserved hypothetical protein            K01971     306      827     0.452      290     
oih:OB3034 hypothetical conserved protein               K01971     595      794     0.283      597     
chy:CHY_0025 conserved hypothetical protein             K01971     293      714     0.415      270     
sct:SCAT_5457 DNA polymerase LigD, ligase domain                   313      691     0.388      317     
sro:Sros_6714 DNA primase small subunit                            334      636     0.359      273     
sgu:SGLAU_28045 hypothetical protein                               336      630     0.370      284     
afu:AF_1725 DNA ligase, putative                        K01971     313      626     0.392      316     
vg:26737567 Sinorhizobium phage phiLM21; non-homologous K01971     330      607     0.369      309     
sco:SCO6709 conserved hypothetical protein                         341      607     0.360      272     
nca:Noca_2445 putative DNA ligase (ATP), C-terminal                326      600     0.342      281     
kfl:Kfla_5287 DNA polymerase LigD, polymerase domain pr            335      597     0.332      298     
sma:SAVERM_1696 putative DNA primase, small subunit                338      592     0.335      281     
ase:ACPL_7020 DNA ligase (ATP)                                     319      591     0.344      279     
pjd:Pjdr2_4985 DNA polymerase LigD, polymerase domain p K01971     304      581     0.374      273     
sgr:SGR_1023 conserved hypothetical protein                        345      581     0.343      271     
tex:Teth514_0952 ATP dependent DNA ligase               K01971     307      574     0.341      320     
stp:Strop_3967 DNA primase, small subunit               K01971     302      574     0.352      287     
ttm:Tthe_0704 ATP dependent DNA ligase                  K01971     307      547     0.335      319     
det:DET0850 conserved hypothetical protein                         183      529     0.484      182     
mma:MM_0209 hypothetical protein                                   152      526     0.521      163     
pde:Pden_4186 conserved hypothetical protein            K01971     330      519     0.326      288     
mac:MA_3428 conserved hypothetical protein                         156      491     0.485      167     
mba:Mbar_A2115 conserved hypothetical protein                      151      479     0.500      162     
pfu:PF1635 DNA ligase (lig)                             K10747     561      449     0.317      338     
pfl:PFL_6269 Hypothetical protein                       K01971     186      431     0.469      145     
pho:PH1622 559aa long hypothetical DNA ligase           K10747     559      412     0.303      333     
ag:CAC21199 DNA ligase (ATP or NAD+) (EC:6.5.1.6)       K10747     559      402     0.314      338     
ton:TON_1515 thermostable DNA ligase                    K10747     562      401     0.325      302     
pab:PAB2002 lig DNA ligase                              K10747     559      401     0.299      348     
pai:PAE0833 DNA ligase                                  K10747     584      398     0.285      382     
tko:TK2140 ATP-dependent DNA ligase                     K10747     562      392     0.302      338     
sai:Saci_0788 thermostable DNA ligase                   K10747     598      381     0.312      349     
cge:100767365 DNA ligase 1 isoform X2                   K10747     931      380     0.296      321     
mmu:16881 DNA ligase 1                                  K10747     916      380     0.288      330     
hth:HTH_1466 DNA ligase                                            572      379     0.279      337     
rno:81513 DNA ligase 1                                  K10747     913      377     0.290      321     
spu:752989 DNA ligase 1 isoform X1                      K10747     715      376     0.285      368     
cpoc:100734013 DNA ligase 1                             K10747     919      372     0.273      362     
afm:AFUA_2G09010 DNA ligase Cdc9                        K10747     909      372     0.296      321     
tca:658633 DNA ligase                                   K10747     756      370     0.277      365     
ppa:PAS_chr3_1112 DNA ligase found in the nucleus and m K10747     744      368     0.279      369     
ocu:100340979 DNA ligase 1 isoform X1                   K10747     915      367     0.285      368     
fca:101093313 DNA ligase 1 isoform X4                   K10747     912      365     0.284      359     
aae:aq_1394 DNA ligase (ATP dependent)                             585      363     0.300      360     
hsa:3978 DNA ligase 1 isoform 1                         K10747     919      361     0.275      367     
mcc:718528 DNA ligase 1 isoform X1                      K10747     919      361     0.275      367     
ptr:468936 DNA ligase 1 isoform X4                      K10747     919      361     0.275      367     
cfa:100686967 DNA ligase 1 isoform X1                   K10747     913      359     0.292      332     
ecb:100053186 DNA ligase 1 isoform X1                   K10747     912      358     0.272      353     
cjc:100415094 DNA ligase 1 isoform X1                   K10747     919      356     0.287      321     
pto:PTO0672 DNA ligase                                  K10747     590      356     0.308      286     
nmr:Nmar_1037 DNA ligase I, ATP-dependent Dnl1          K10747     588      354     0.276      406     
mdo:100616962 DNA ligase 1-like                                    632      350     0.273      344     
ssc:100520434 DNA ligase 1                              K10747     923      349     0.292      322     
rfq:117035168 LOW QUALITY PROTEIN: DNA ligase 1         K10747    1060      348     0.267      367     
ddi:DDB_G0274493 DNA ligase I                           K10747    1192      348     0.298      356     
oas:101104173 DNA ligase 1 isoform X4                   K10747     958      347     0.289      332     
bta:100124507 DNA ligase 1                              K10747     916      347     0.289      332     
spo:2541849 ATP-dependent DNA replication ligase Cdc17  K10747     768      346     0.301      329     
tac:Ta1148 DNA ligase related protein                   K10747     588      346     0.262      416     
sto:STK_02230 DNA ligase                                K10747     600      345     0.294      384     
ape:APE_1094.1 ADP-dependent DNA ligase                 K10747     602      344     0.304      385     
cel:CELE_C29A12.3 DNA ligase 1                          K10747     773      341     0.286      360     
ecu:ECU02_1220 uncharacterized protein                  K10747     589      341     0.287      317     
sso:SSO0189 DNA ligase (polydeoxyribonucleotide synthas K10747     601      341     0.264      421     
aag:23687986 DNA ligase 1 isoform X2                    K10747     905      340     0.282      347     
mja:MJ_0171 DNA ligase (lig)                            K10747     573      340     0.278      374     
ptex:113448488 DNA ligase 1 isoform X1                  K10747     941      339     0.269      361     
ehi:EHI_111060 DNA ligase                               K10747     685      339     0.271      291     
apla:101796914 DNA ligase 1 isoform X1                  K10747     775      338     0.275      367     
cre:CHLRE_07g325716v5 uncharacterized protein           K10747     973      338     0.309      311     
yli:2908208 DNA ligase 1                                K10747     711      337     0.269      324     
mse:Msed_0150 DNA ligase I, ATP-dependent Dnl1          K10747     598      337     0.286      343     
nve:5510104 DNA ligase 1                                K10747     959      336     0.259      398     
cne:CNI04170 DNA ligase, putative                       K10747     803      336     0.281      327     
sshi:J5U23_00068 DNA ligase (ATP, ADP or GTP)           K10747     601      335     0.271      421     
pmur:107285325 DNA ligase 1                             K10747     944      335     0.264      440     
ola:101167483 DNA ligase 1                              K10747     993      333     0.268      354     
pfa:PF3D7_1304100 DNA ligase I                          K10747     912      330     0.279      351     
aga:1280180 DNA ligase 1 isoform X1                     K10747     899      329     0.272      375     
tva:5466150 DNA ligase 1/3 family member family                    679      329     0.300      303     
dre:556995 DNA ligase 1                                 K10747    1058      328     0.269      353     
gga:430516 DNA ligase 1 isoform X4                      K10747     775      326     0.271      362     
cin:100181519 DNA ligase 1-like                         K10747    1060      325     0.254      449     
tbr:Tb927.6.4780 DNA ligase I, putative                 K10747     699      325     0.275      320     
ame:408752 DNA ligase 1 isoform X1                      K10747     964      324     0.258      353     
csv:101213447 DNA ligase 1                              K10747     801      321     0.273      384     
smo:SELMODRAFT_97261 hypothetical protein                          620      321     0.263      357     
xtr:100271763 DNA ligase 1                              K10747    1040      319     0.270      344     
mtr:25492370 DNA ligase 1                               K10747     777      317     0.274      398     
sly:101262281 DNA ligase 1                              K10747     802      314     0.275      364     
sot:102604298 DNA ligase 1-like                         K10747     802      312     0.273      363     
mdm:103413077 DNA ligase 1                              K10747     732      310     0.266      379     
xla:397978 DNA ligase 1                                 K10747    1070      310     0.267      344     
dne:112995498 DNA ligase 1                              K10747     868      307     0.273      352     
lma:LMJF_30_3440 putative DNA ligase I                  K10747     681      306     0.267      386     
amj:102566879 DNA ligase 1                              K10747     954      305     0.271      361     
pif:PITG_04709 DNA ligase, putative                               3896      305     0.275      360     
aor:AO090011000796 unnamed protein product; ATP-depende K10747     882      305     0.262      340     
nta:107828011 DNA ligase 1                              K10747     775      303     0.270      344     
ksk:KSE_05320 hypothetical protein                      K01971     173      302     0.346      153     
uma:UMAG_11196 putative DNA ligase I                    K10747     851      301     0.286      350     
sce:YDL164C DNA ligase (ATP) CDC9                       K10747     755      301     0.272      334     
tcr:506835.120 DNA ligase I                             K10747     701      301     0.253      380     
tps:THAPSDRAFT_268404 ligase                            K10747     633      299     0.280      329     
cit:102628869 DNA ligase 1                              K10747     806      298     0.251      382     
hma:rrnAC0463 DNA ligase                                K10747     554      298     0.272      320     
vvi:100256907 DNA ligase 1                              K10747     782      295     0.274      376     
ani:ANIA_06069 hypothetical protein                     K10747     932      295     0.259      352     
pti:PHATR_51005 hypothetical protein                    K10747     651      293     0.262      382     
dme:Dmel_CG5602 DNA ligase 1                                       747      292     0.284      327     
gmx:100783155 DNA ligase 1                              K10747     776      290     0.262      325     
tgo:7896565 DNA ligase 1, putative                                1331      290     0.280      311     
ath:AT1G08130 DNA ligase 1                              K10747     790      290     0.269      383     
ncr:NCU06481 DNA ligase                                 K10747     923      289     0.272      378     
mmp:MMP0970 ATP-dependent DNA ligase                    K10747     573      289     0.257      358     
cal:CAALFM_C300830CA DNA ligase (ATP)                   K10747     770      288     0.241      349     
rcu:8275235 DNA ligase 1                                K10747     796      285     0.260      381     
bmor:101739080 DNA ligase 1 isoform X1                  K10747     885      282     0.273      315     
mmg:MTBMA_c01660 ATP-dependent DNA ligase               K10747     551      282     0.252      330     
hvo:HVO_1565 DNA ligase (ATP)                           K10747     585      282     0.279      326     
tre:TRIREDRAFT_22881 DNA ligase                         K10747     877      280     0.266      327     
kla:KLLA0_D12496g uncharacterized protein               K10747     700      279     0.263      327     
xom:XOO1771 DNA ligase                                             534      278     0.296      260     
ppp:112290811 DNA ligase 1                              K10747     776      276     0.253      348     
mgr:MGG_06370 DNA ligase 1                              K10747     896      276     0.263      327     
hal:VNG_0881G DNA ligase                                K10747     561      275     0.269      350     
fgr:FGSG_05453 DNA ligase                               K10747     867      274     0.270      319     
maj:MAA_03560 DNA ligase (Polydeoxyribonucleotide synth K10747     898      270     0.270      326     
fvr:FVEG_07075 DNA ligase 1                             K10747     916      269     0.265      317     
osa:4348965 DNA ligase 1 isoform X1                     K10747     916      266     0.242      372     
mxa:MXAN_6074 DNA ligase, ATP-dependent                            531      266     0.248      335     
zma:100383890 uncharacterized protein LOC100383890      K10747     909      263     0.252      341     
tgu:100225693 DNA ligase 4                              K10777     911      255     0.227      542     
mth:MTH_1580 DNA ligase                                 K10747     561      255     0.252      325     
smm:Smp_019840.1 DNA ligase I, putative                            783      252     0.247      332     
zga:ZOBELLIA_2113 DNA ligase                                       554      249     0.229      384     
clv:102093808 DNA ligase 4                              K10777     912      244     0.228      553     
tru:101068311 DNA ligase 3                              K10776     998      242     0.252      313     
vvu:VV1_2657 ATP-dependent DNA ligase                   K26441     280      226     0.276      283     
mea:Mex_1p3448 putative ATP-dependent DNA ligase                   635      224     0.266      387     
ccr:CC_3610 DNA ligase, ATP-dependent, putative                    541      221     0.258      356     
vpa:VP1477 DNA ligase                                   K26441     280      210     0.273      253     
cje:Cj1669c ATP-dependent DNA ligase                    K26441     282      190     0.252      309     
gla:GL50803_007649 DNA ligase (ATP)                                810      186     0.243      300     
vfi:VF_1450 DNA ligase                                  K26441     285      176     0.248      282     
apl:APL_0565 hypothetical ABC transporter ATP-binding p K02014    1046      171     0.245      294     
vch:VC_1542 DNA ligase                                  K26441     282      169     0.275      240     
alv:Alvin_0262 ATP dependent DNA ligase                 K26441     320      154     0.263      255     
lil:LA_0984 ATP-dependent DNA ligase                    K01971     501      151     0.233      283     
ser:SERP1534 DNA ligase, ATP-dependent                             432      146     0.230      300     
gvi:glr1610 ORF_ID:glr1610; unknown protein             K02014     752      135     0.219      242     
ypk:Y1095.pl unknown                                               365      134     0.209      311     
sty:HCM2.0035c putative DNA ligase                                 440      133     0.206      311     
nme:NMB2048 DNA ligase                                  K26441     274      132     0.246      199     
ooe:OEOE_1442 Peptidoglycan interpeptide bridge formati K12554     422      130     0.235      328     
rru:Rru_A0511 DEAD/DEAH box helicase                               869      130     0.215      376     
ngo:NGO_2034 DNA ligase                                 K26441     274      130     0.231      195     
ddd:Dda3937_02890 Putative phosphatase                             428      126     0.245      278     
pgi:PG_0992 threonyl-tRNA synthetase                    K01868     653      126     0.224      473     
cps:CPS_4198 putative alpha-1,2-fucosyltransferase                 294      124     0.243      210     
cro:ROD_02071 D-methionine ABC transporter, substrate-b K02073     271      118     0.228      224     
pdi:BDI_3466 conserved hypothetical protein                        860      118     0.202      223     
gme:Gmet_0897 polysaccharide deacetylase domain protein            264      118     0.264      163     
cvi:CV_1467 hypothetical protein                                   276      118     0.222      180     
cpn:CPn_1041 Adenosylmethionine-8-Amino-7-Oxononanoate  K00833     423      118     0.260      127     
ctt:CtCNB1_1783 ATP dependent DNA ligase                K26441     279      117     0.268      224     
neu:NE1626 putative TonB protein                        K03832     304      116     0.275      153     
hin:HI_1182 predicted coding region HI1182              K26441     185      113     0.274      179     
hel:HELO_2941H DUF867 family protein                               204      112     0.259      143     
abo:ABO_2702 DNA ligase (ATP)                           K26441     283      111     0.351      74      
afr:AFE_3029 3-deoxy-D-manno-octulosonate 8-phosphate p K03270     184      109     0.211      147     
acb:A1S_1560 putative deoxyribonuclease                 K03424     257      109     0.242      236     
son:SO_3438 2-C-methyl-D-erythritol 4-phosphate cytidyl K00991     249      109     0.273      150     
tde:TDE_0355 conserved hypothetical protein                        190      107     0.259      116     
rco:RC0927 unknown                                                  67       91     0.282      71      

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