GFIT result for
tct
|
GFIT result for
tct
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| tct:PX653_26035 (728 a.a.) |
-- |
K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > masy:DPH57_24540(744) | 728 | 98.5 | 4579 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masz:C9I28_24605(745) | 729 | 98.4 | 4568 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mpli:E1742_11645(754) | 738 | 96.5 | 4528 | 10 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfla:GO485_11325(752) | 737 | 96.1 | 4476 | 10 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mali:EYF70_02765(756) | 740 | 94.6 | 4428 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mum:FCL38_15805(757) | 741 | 94.5 | 4428 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > dug:HH213_06120(747) | 731 | 94.5 | 4410 | 6 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mnr:ACZ75_23525(746) | 731 | 94.1 | 4378 | 9 | <- | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > dzo:SR858_03060(?) | 735 | 93.6 | 4360 | 0 | -- | - | |||
| > meny:LSQ66_17290(?) | 730 | 93.7 | 4360 | 0 | -- | - | |||
| > rug:QC826_03395(733) | 733 | 93.0 | 4339 | 3 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mass:CR152_13020(738) | 739 | 91.2 | 4273 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > manc:IV454_02620(750) | 734 | 91.6 | 4268 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jal:BZG29_24365(747) | 735 | 91.6 | 4253 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jag:GJA_890(734) | 730 | 90.8 | 4249 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jah:JAB4_050230(746) | 734 | 91.3 | 4238 | 5 | <- | K03086 | rpoD | rpoD_2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jri:P9875_25445(746) | 734 | 91.3 | 4237 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tmj:P0M04_13345(736) | 734 | 90.9 | 4231 | 0 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jaz:YQ44_03205(746) | 734 | 91.1 | 4229 | 4 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > jlv:G3257_25065(746) | 734 | 91.1 | 4228 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jsv:CNX70_24740(746) | 734 | 90.9 | 4225 | 6 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mlir:LPB04_09475(?) | 733 | 90.7 | 4224 | 0 | -- | - | |||
| > jas:FJQ89_13975(746) | 734 | 90.6 | 4216 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mtim:DIR46_17585(753) | 733 | 90.7 | 4215 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masw:AM586_23910(734) | 733 | 90.2 | 4204 | 6 | <- | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > mvar:MasN3_44230(751) | 733 | 89.1 | 4178 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mms:mma_0493(826) | 735 | 87.8 | 4137 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase primary sigma factor; K03086 RNA polymerase primary sigma factor | |
| > har:HEAR0442(800) | 736 | 87.5 | 4114 | 4 | <- | K03086 | rpoD | putative RNA polymerase sigma factor rpoD (Sigma-70); K03086 RNA polymerase primary sigma factor | |
| > nok:FAY22_00380(827) | 727 | 87.6 | 4100 | 27 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jaj:EKL02_16165(860) | 727 | 87.3 | 4095 | 22 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cfu:CFU_1025(831) | 712 | 88.8 | 4078 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > hee:hmeg3_19485(863) | 733 | 86.9 | 4074 | 22 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > care:LT85_1165(752) | 713 | 89.1 | 4070 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cpra:CPter91_1122(745) | 712 | 88.5 | 4066 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > actb:RHM62_18650(?) | 737 | 86.0 | 4060 | 0 | -- | - | |||
| > hht:F506_07150(859) | 733 | 86.9 | 4052 | 15 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > glc:JQN73_04935(850) | 711 | 88.9 | 4048 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hhf:E2K99_04215(850) | 730 | 86.6 | 4047 | 26 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hrb:Hrubri_0738(850) | 730 | 86.7 | 4045 | 23 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hse:Hsero_0870(850) | 730 | 86.4 | 4036 | 24 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hsz:ACP92_04370(850) | 730 | 86.4 | 4036 | 24 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > hfr:G5S34_04260(850) | 730 | 86.3 | 4029 | 25 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > und:UNDKW_1456(865) | 731 | 85.0 | 4028 | 8 | <- | K03086 | rpoD | hypothetical protein; K03086 RNA polymerase primary sigma factor | |
| > upv:EJN92_03990(897) | 730 | 84.1 | 3965 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > upi:EJG51_007715(747) | 730 | 83.7 | 3955 | 3 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > oal:NB647_03480(827) | 714 | 81.2 | 3784 | 1 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ofo:BRW83_0800(819) | 724 | 80.2 | 3759 | 1 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfy:HH212_12175(642) | 640 | 90.3 | 3717 | 6 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ovb:NB640_03710(734) | 715 | 78.0 | 3621 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cox:E0W60_22885(847) | 739 | 72.4 | 3378 | 19 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reh:H16_A2725(827) | 742 | 72.0 | 3372 | 13 | <- | K03086 | rpoD | rpoD1; DNA-directed RNA polymerase sigma subunit (RpoD); K03086 RNA polymerase primary sigma factor | |
| > pgis:I6I06_17615(795) | 726 | 73.3 | 3368 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuk:KB879_25560(850) | 745 | 72.2 | 3366 | 20 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rmn:TK49_14525(827) | 743 | 72.1 | 3364 | 16 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > rpj:N234_15435(850) | 741 | 71.4 | 3364 | 14 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > ccup:BKK81_15305(744) | 742 | 72.0 | 3359 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cup:BKK80_16255(744) | 742 | 72.0 | 3359 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuu:BKK79_16695(744) | 742 | 72.0 | 3359 | 7 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pacp:FAZ97_21915(802) | 728 | 72.8 | 3358 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > brh:RBRH_01153(778) | 677 | 77.8 | 3354 | 2 | <- | K03086 | rpoD | RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor | |
| > pacs:FAZ98_17775(798) | 727 | 72.5 | 3353 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcj:CUJ87_26830(803) | 741 | 72.6 | 3353 | 11 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuh:BJN34_14680(850) | 745 | 71.7 | 3351 | 16 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pspw:BJG93_20670(796) | 733 | 73.1 | 3351 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pkf:RW095_16445(?) | 741 | 72.6 | 3350 | 0 | -- | - | |||
| > rsl:RPSI07_1208(876) | 742 | 71.0 | 3350 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > bge:BC1002_5279(680) | 674 | 77.4 | 3349 | 5 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pnr:AT302_16095(700) | 694 | 75.4 | 3349 | 5 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reu:Reut_A0888(783) | 737 | 72.0 | 3349 | 25 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pbry:NDK50_35105(797) | 719 | 74.3 | 3348 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcaf:DSC91_002804(680) | 674 | 77.3 | 3346 | 2 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cnan:A2G96_17265(?) | 737 | 71.9 | 3344 | 0 | -- | - | |||
| > bpy:Bphyt_6774(681) | 681 | 76.8 | 3342 | 4 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bug:BC1001_4961(680) | 673 | 77.1 | 3342 | 4 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > parb:CJU94_29570(800) | 726 | 72.9 | 3342 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bcai:K788_0000369(685) | 679 | 76.0 | 3341 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgf:BC1003_4533(803) | 729 | 72.6 | 3340 | 9 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpx:BUPH_01526(680) | 674 | 77.2 | 3340 | 4 | -- | K03086 | rpoD | RNA polymerase primary sigma factor; K03086 RNA polymerase primary sigma factor | |
| > caba:SBC2_56960(873) | 724 | 72.7 | 3340 | 5 | <- | K03086 | rpoD | rpoD_2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cpau:EHF44_09980(856) | 743 | 71.2 | 3340 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > buz:AYM40_22490(680) | 672 | 76.8 | 3339 | 7 | <- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > bxb:DR64_5149(680) | 674 | 77.4 | 3339 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bxe:Bxe_B2820(680) | 674 | 77.4 | 3339 | 8 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pdio:PDMSB3_0236.1(680) | 674 | 77.4 | 3339 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase, sigma 70 (sigma D) factor; K03086 RNA polymerase primary sigma factor | |
| > bfn:OI25_5231(680) | 672 | 76.6 | 3338 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmj:BMULJ_03703(804) | 728 | 72.0 | 3338 | 47 | <- | rpoD; RNA polymerase primary sigma factor | |||
| > bmu:Bmul_4813(804) | 728 | 72.0 | 3338 | 50 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgp:CUJ91_31075(807) | 728 | 72.4 | 3338 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppk:U875_08055(691) | 696 | 75.1 | 3338 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppnm:LV28_05550(691) | 696 | 75.1 | 3338 | 3 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > ppno:DA70_00765(691) | 696 | 75.1 | 3338 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > prb:X636_01570(691) | 696 | 75.1 | 3338 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pts:CUJ90_24685(799) | 727 | 72.9 | 3337 | 15 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgp:BGL_2c21380(805) | 749 | 70.9 | 3336 | 23 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > bpla:bpln_2g21580(805) | 749 | 70.9 | 3336 | 28 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > buq:AC233_25130(680) | 674 | 77.2 | 3336 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > para:BTO02_20190(799) | 724 | 72.5 | 3336 | 12 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pew:KZJ38_35870(800) | 652 | 78.8 | 3335 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pmeg:FNZ07_06525(802) | 740 | 72.2 | 3335 | 17 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > byi:BYI23_B011060(737) | 738 | 72.1 | 3334 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |