GFIT result for
care
|
GFIT result for
care
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| care:LT85_1165 (752 a.a.) |
-- |
K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > cpra:CPter91_1122(745) | 746 | 97.6 | 4621 | 2 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cfu:CFU_1025(831) | 752 | 96.5 | 4612 | 11 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > glc:JQN73_04935(850) | 755 | 93.5 | 4444 | 4 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hht:F506_07150(859) | 752 | 90.7 | 4323 | 15 | -> | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > hee:hmeg3_19485(863) | 752 | 90.6 | 4316 | 22 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > har:HEAR0442(800) | 753 | 89.9 | 4269 | 4 | -> | K03086 | rpoD | putative RNA polymerase sigma factor rpoD (Sigma-70); K03086 RNA polymerase primary sigma factor | |
| > mms:mma_0493(826) | 753 | 89.4 | 4263 | 9 | -> | K03086 | rpoD | rpoD; RNA polymerase primary sigma factor; K03086 RNA polymerase primary sigma factor | |
| > hfr:G5S34_04260(850) | 751 | 88.9 | 4250 | 25 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hhf:E2K99_04215(850) | 751 | 88.8 | 4248 | 26 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hse:Hsero_0870(850) | 752 | 89.0 | 4241 | 24 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hsz:ACP92_04370(850) | 752 | 89.0 | 4241 | 24 | -> | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > hrb:Hrubri_0738(850) | 751 | 88.8 | 4239 | 23 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > nok:FAY22_00380(827) | 752 | 87.8 | 4178 | 27 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jaj:EKL02_16165(860) | 750 | 85.7 | 4134 | 22 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > dug:HH213_06120(747) | 748 | 86.8 | 4108 | 6 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > dzo:SR858_03060(?) | 736 | 88.2 | 4107 | 0 | -- | - | |||
| > mpli:E1742_11645(754) | 758 | 85.5 | 4106 | 10 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jri:P9875_25445(746) | 747 | 87.0 | 4104 | 5 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rug:QC826_03395(733) | 713 | 90.0 | 4103 | 3 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mali:EYF70_02765(756) | 759 | 85.2 | 4102 | 9 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jah:JAB4_050230(746) | 747 | 86.9 | 4101 | 5 | -> | K03086 | rpoD | rpoD_2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masz:C9I28_24605(745) | 745 | 87.0 | 4101 | 10 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jaz:YQ44_03205(746) | 747 | 86.9 | 4098 | 4 | -> | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > jlv:G3257_25065(746) | 747 | 87.0 | 4098 | 5 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfla:GO485_11325(752) | 755 | 85.6 | 4098 | 10 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jal:BZG29_24365(747) | 748 | 87.0 | 4097 | 4 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jag:GJA_890(734) | 739 | 87.3 | 4094 | 5 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masy:DPH57_24540(744) | 745 | 86.8 | 4092 | 4 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mum:FCL38_15805(757) | 760 | 85.1 | 4092 | 7 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > manc:IV454_02620(750) | 755 | 85.8 | 4089 | 5 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jas:FJQ89_13975(746) | 747 | 86.6 | 4087 | 7 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > actb:RHM62_18650(?) | 760 | 85.3 | 4083 | 0 | -- | - | |||
| > jsv:CNX70_24740(746) | 747 | 86.6 | 4082 | 6 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ehb:E7V67_022650(?) | 713 | 89.5 | 4080 | 0 | -- | - | |||
| > mtim:DIR46_17585(753) | 750 | 85.5 | 4080 | 5 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tct:PX653_26035(728) | 713 | 89.1 | 4070 | 4 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mass:CR152_13020(738) | 754 | 85.4 | 4068 | 5 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mvar:MasN3_44230(751) | 752 | 84.3 | 4066 | 4 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tmj:P0M04_13345(736) | 725 | 87.3 | 4064 | 0 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mnr:ACZ75_23525(746) | 749 | 86.4 | 4056 | 9 | -> | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > und:UNDKW_1456(865) | 755 | 84.1 | 4054 | 8 | -> | K03086 | rpoD | hypothetical protein; K03086 RNA polymerase primary sigma factor | |
| > masw:AM586_23910(734) | 724 | 87.0 | 4051 | 6 | -> | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > meny:LSQ66_17290(?) | 748 | 85.6 | 4044 | 0 | -- | - | |||
| > mlir:LPB04_09475(?) | 749 | 85.3 | 4044 | 0 | -- | - | |||
| > upi:EJG51_007715(747) | 748 | 83.4 | 3978 | 3 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > upv:EJN92_03990(897) | 754 | 83.2 | 3968 | 11 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ofo:BRW83_0800(819) | 754 | 76.9 | 3736 | 1 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > oal:NB647_03480(827) | 749 | 77.7 | 3724 | 1 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ovb:NB640_03710(734) | 719 | 77.2 | 3610 | 2 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfy:HH212_12175(642) | 642 | 86.8 | 3595 | 6 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pnr:AT302_16095(700) | 698 | 77.1 | 3405 | 5 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cox:E0W60_22885(847) | 763 | 70.5 | 3384 | 19 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfib:PI93_012115(789) | 747 | 72.3 | 3381 | 18 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reu:Reut_A0888(783) | 763 | 71.0 | 3381 | 25 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > reh:H16_A2725(827) | 764 | 70.9 | 3380 | 13 | -> | K03086 | rpoD | rpoD1; DNA-directed RNA polymerase sigma subunit (RpoD); K03086 RNA polymerase primary sigma factor | |
| > rpj:N234_15435(850) | 763 | 70.6 | 3380 | 14 | -> | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > cnan:A2G96_17265(?) | 764 | 71.1 | 3378 | 0 | -- | - | |||
| > ccup:BKK81_15305(744) | 762 | 70.9 | 3374 | 4 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cup:BKK80_16255(744) | 762 | 70.9 | 3374 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuu:BKK79_16695(744) | 762 | 70.9 | 3374 | 7 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppk:U875_08055(691) | 700 | 75.9 | 3371 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppnm:LV28_05550(691) | 700 | 75.9 | 3371 | 3 | -- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > ppno:DA70_00765(691) | 700 | 75.9 | 3371 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > prb:X636_01570(691) | 700 | 75.9 | 3371 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuk:KB879_25560(850) | 764 | 70.9 | 3369 | 20 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pspu:NA29_12205(701) | 698 | 76.2 | 3366 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcom:NTU39_17520(701) | 707 | 75.5 | 3364 | 2 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cpau:EHF44_09980(856) | 763 | 70.2 | 3360 | 13 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ppul:RO07_24500(699) | 702 | 76.4 | 3360 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pfg:AB870_02870(700) | 693 | 75.9 | 3356 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pve:UC34_15945(676) | 658 | 78.6 | 3353 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccax:KZ686_14540(750) | 754 | 71.1 | 3350 | 12 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > papi:SG18_23815(698) | 701 | 74.9 | 3347 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cgd:CR3_1956(750) | 754 | 70.8 | 3346 | 11 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuh:BJN34_14680(850) | 767 | 70.7 | 3345 | 16 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pand:DRB87_14825(700) | 693 | 76.0 | 3342 | 5 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pox:MB84_20810(662) | 662 | 78.5 | 3342 | 3 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgis:I6I06_17615(795) | 750 | 71.2 | 3339 | 8 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bari:NLX30_33875(805) | 747 | 71.2 | 3336 | 34 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > parb:CJU94_29570(800) | 766 | 70.5 | 3336 | 10 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccam:M5D45_12045(684) | 680 | 76.8 | 3335 | 3 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bam:Bamb_3257(805) | 745 | 70.9 | 3334 | 36 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bann:JFN94_22185(805) | 745 | 70.9 | 3332 | 30 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmj:BMULJ_03703(804) | 744 | 70.8 | 3332 | 47 | -> | rpoD; RNA polymerase primary sigma factor | |||
| > bmu:Bmul_4813(804) | 744 | 70.8 | 3332 | 50 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rmn:TK49_14525(827) | 764 | 69.6 | 3332 | 16 | -> | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > tvl:FAZ95_37355(?) | 753 | 70.7 | 3332 | 0 | -- | - | |||
| > bac:BamMC406_3783(805) | 745 | 70.7 | 3331 | 30 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > baen:L3V59_34395(?) | 748 | 70.9 | 3329 | 0 | -- | - | |||
| > pbry:NDK50_35105(797) | 763 | 70.8 | 3329 | 5 | -> | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rme:Rmet_2606(855) | 764 | 69.9 | 3326 | 12 | -> | K03086 | rpoD | rpoD1; RNA polymerase sigma D factor (housekeeping sigma factor); K03086 RNA polymerase primary sigma factor | |
| > burk:DM992_30230(805) | 745 | 70.6 | 3324 | 30 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bur:Bcep18194_B2204(808) | 746 | 70.8 | 3323 | 31 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcj:CUJ87_26830(803) | 751 | 70.6 | 3323 | 11 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rsl:RPSI07_1208(876) | 757 | 69.6 | 3323 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma70 factor; K03086 RNA polymerase primary sigma factor | |
| > bch:Bcen2424_3886(805) | 747 | 71.0 | 3322 | 29 | -> | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > tcar:U0034_27330(?) | 741 | 71.3 | 3322 | 0 | -- | - | |||
| > pkf:RW095_16445(?) | 751 | 70.6 | 3320 | 0 | -- | - | |||
| > bct:GEM_4864(683) | 675 | 76.6 | 3318 | 4 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bte:BTH_II0621(800) | 752 | 69.7 | 3318 | 43 | -> | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |