GFIT result for
rug
|
GFIT result for
rug
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rug:QC826_03395 (733 a.a.) |
-- |
K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > dug:HH213_06120(747) | 733 | 94.5 | 4425 | 6 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > dzo:SR858_03060(?) | 737 | 95.0 | 4404 | 0 | -- | - | |||
| > masy:DPH57_24540(744) | 733 | 94.0 | 4369 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masz:C9I28_24605(745) | 733 | 93.9 | 4367 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mnr:ACZ75_23525(746) | 733 | 93.7 | 4357 | 9 | <- | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > jal:BZG29_24365(747) | 733 | 93.7 | 4351 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mpli:E1742_11645(754) | 740 | 92.7 | 4351 | 10 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > manc:IV454_02620(750) | 736 | 93.2 | 4342 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfla:GO485_11325(752) | 737 | 92.8 | 4340 | 10 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tct:PX653_26035(728) | 733 | 93.0 | 4339 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mum:FCL38_15805(757) | 742 | 92.5 | 4332 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jri:P9875_25445(746) | 733 | 93.5 | 4328 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jah:JAB4_050230(746) | 733 | 93.5 | 4325 | 5 | <- | K03086 | rpoD | rpoD_2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mali:EYF70_02765(756) | 742 | 92.3 | 4325 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mass:CR152_13020(738) | 741 | 92.3 | 4325 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jlv:G3257_25065(746) | 734 | 93.2 | 4320 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jas:FJQ89_13975(746) | 734 | 93.2 | 4317 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jaz:YQ44_03205(746) | 734 | 93.2 | 4317 | 4 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > jsv:CNX70_24740(746) | 734 | 93.2 | 4314 | 6 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > jag:GJA_890(734) | 733 | 92.2 | 4294 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > meny:LSQ66_17290(?) | 733 | 92.1 | 4294 | 0 | -- | - | |||
| > mlir:LPB04_09475(?) | 732 | 91.5 | 4265 | 0 | -- | - | |||
| > tmj:P0M04_13345(736) | 735 | 91.0 | 4242 | 0 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mvar:MasN3_44230(751) | 734 | 90.7 | 4232 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > masw:AM586_23910(734) | 734 | 90.5 | 4231 | 6 | <- | K03086 | rpoD | RNA polymerase subunit sigma-70; K03086 RNA polymerase primary sigma factor | |
| > mtim:DIR46_17585(753) | 735 | 91.2 | 4225 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mms:mma_0493(826) | 734 | 89.4 | 4201 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase primary sigma factor; K03086 RNA polymerase primary sigma factor | |
| > har:HEAR0442(800) | 735 | 88.4 | 4161 | 4 | <- | K03086 | rpoD | putative RNA polymerase sigma factor rpoD (Sigma-70); K03086 RNA polymerase primary sigma factor | |
| > care:LT85_1165(752) | 713 | 90.0 | 4103 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cpra:CPter91_1122(745) | 713 | 90.0 | 4103 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > actb:RHM62_18650(?) | 737 | 87.7 | 4102 | 0 | -- | - | |||
| > jaj:EKL02_16165(860) | 731 | 87.6 | 4100 | 22 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hee:hmeg3_19485(863) | 732 | 88.0 | 4098 | 22 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > nok:FAY22_00380(827) | 732 | 88.3 | 4095 | 27 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cfu:CFU_1025(831) | 733 | 87.6 | 4092 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > glc:JQN73_04935(850) | 711 | 89.9 | 4085 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hht:F506_07150(859) | 731 | 87.8 | 4083 | 15 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > und:UNDKW_1456(865) | 733 | 85.4 | 4073 | 8 | <- | K03086 | rpoD | hypothetical protein; K03086 RNA polymerase primary sigma factor | |
| > hrb:Hrubri_0738(850) | 732 | 87.3 | 4064 | 23 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hhf:E2K99_04215(850) | 732 | 87.0 | 4063 | 26 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > hse:Hsero_0870(850) | 732 | 86.9 | 4053 | 24 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma-70 factor transcription regulator protein; K03086 RNA polymerase primary sigma factor | |
| > hsz:ACP92_04370(850) | 732 | 86.9 | 4053 | 24 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > hfr:G5S34_04260(850) | 732 | 86.7 | 4050 | 25 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > upv:EJN92_03990(897) | 733 | 84.3 | 3978 | 11 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > upi:EJG51_007715(747) | 733 | 84.3 | 3976 | 3 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ofo:BRW83_0800(819) | 736 | 80.4 | 3799 | 1 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > oal:NB647_03480(827) | 714 | 81.0 | 3785 | 1 | -- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > mfy:HH212_12175(642) | 642 | 90.8 | 3703 | 6 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ovb:NB640_03710(734) | 731 | 77.0 | 3658 | 2 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > ccup:BKK81_15305(744) | 740 | 72.2 | 3368 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cup:BKK80_16255(744) | 740 | 72.2 | 3368 | 4 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuu:BKK79_16695(744) | 740 | 72.2 | 3368 | 7 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > tvl:FAZ95_37355(?) | 732 | 73.5 | 3363 | 0 | -- | - | |||
| > cox:E0W60_22885(847) | 744 | 71.6 | 3358 | 19 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > rpj:N234_15435(850) | 744 | 71.9 | 3358 | 14 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > pkf:RW095_16445(?) | 722 | 73.5 | 3354 | 0 | -- | - | |||
| > reh:H16_A2725(827) | 744 | 72.2 | 3354 | 13 | <- | K03086 | rpoD | rpoD1; DNA-directed RNA polymerase sigma subunit (RpoD); K03086 RNA polymerase primary sigma factor | |
| > pcj:CUJ87_26830(803) | 722 | 73.4 | 3351 | 11 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgis:I6I06_17615(795) | 723 | 73.2 | 3350 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pbry:NDK50_35105(797) | 754 | 71.6 | 3348 | 5 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > reu:Reut_A0888(783) | 743 | 72.1 | 3348 | 25 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pgp:CUJ91_31075(807) | 722 | 73.4 | 3344 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bam:Bamb_3257(805) | 739 | 71.4 | 3341 | 36 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bann:JFN94_22185(805) | 739 | 71.3 | 3341 | 30 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cpau:EHF44_09980(856) | 746 | 71.2 | 3341 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cnan:A2G96_17265(?) | 719 | 73.7 | 3340 | 0 | -- | - | |||
| > cuk:KB879_25560(850) | 746 | 72.0 | 3340 | 20 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bgf:BC1003_4533(803) | 723 | 72.9 | 3338 | 9 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > para:BTO02_20190(799) | 724 | 72.8 | 3337 | 12 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > buo:BRPE64_BCDS12030(686) | 677 | 76.7 | 3336 | 4 | <- | K03086 | rpoD | RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor | |
| > buz:AYM40_22490(680) | 675 | 76.9 | 3336 | 7 | <- | K03086 | rpoD | RNA polymerase subunit sigma; K03086 RNA polymerase primary sigma factor | |
| > byi:BYI23_B011060(737) | 720 | 73.3 | 3336 | 7 | <- | K03086 | rpoD | rpoD; RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pdio:PDMSB3_0236.1(680) | 675 | 77.3 | 3336 | 6 | -- | K03086 | rpoD | rpoD; RNA polymerase, sigma 70 (sigma D) factor; K03086 RNA polymerase primary sigma factor | |
| > pmeg:FNZ07_06525(802) | 739 | 72.4 | 3336 | 17 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpy:Bphyt_6774(681) | 682 | 76.5 | 3335 | 4 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > pts:CUJ90_24685(799) | 722 | 73.3 | 3334 | 15 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > brh:RBRH_01153(778) | 718 | 73.4 | 3333 | 2 | <- | K03086 | rpoD | RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor | |
| > bur:Bcep18194_B2204(808) | 740 | 71.2 | 3333 | 31 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > rmn:TK49_14525(827) | 744 | 71.4 | 3333 | 16 | <- | K03086 | rpoD | RNA polymerase sigma 70; K03086 RNA polymerase primary sigma factor | |
| > bmj:BMULJ_03703(804) | 736 | 71.3 | 3332 | 47 | <- | rpoD; RNA polymerase primary sigma factor | |||
| > bmu:Bmul_4813(804) | 736 | 71.3 | 3332 | 50 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bug:BC1001_4961(680) | 675 | 77.0 | 3332 | 4 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bxb:DR64_5149(680) | 675 | 77.2 | 3332 | 8 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bxe:Bxe_B2820(680) | 675 | 77.2 | 3332 | 8 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > cabk:NK8_31280(?) | 678 | 77.1 | 3332 | 0 | -- | - | |||
| > pew:KZJ38_35870(800) | 728 | 72.5 | 3332 | 13 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > cuh:BJN34_14680(850) | 744 | 71.9 | 3331 | 16 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > buq:AC233_25130(680) | 674 | 77.0 | 3330 | 5 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > pcaf:DSC91_002804(680) | 676 | 76.8 | 3330 | 2 | -- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bac:BamMC406_3783(805) | 739 | 71.0 | 3328 | 30 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > baen:L3V59_34395(?) | 742 | 71.0 | 3328 | 0 | -- | - | |||
| > bari:NLX30_33875(805) | 736 | 71.9 | 3328 | 34 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpx:BUPH_01526(680) | 674 | 76.9 | 3328 | 4 | -- | K03086 | rpoD | RNA polymerase primary sigma factor; K03086 RNA polymerase primary sigma factor | |
| > parb:CJU94_29570(800) | 676 | 76.8 | 3328 | 10 | <- | K03086 | rpoD | RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bch:Bcen2424_3886(805) | 736 | 71.9 | 3327 | 29 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bfn:OI25_5231(680) | 675 | 76.6 | 3326 | 4 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bge:BC1002_5279(680) | 675 | 77.2 | 3326 | 5 | <- | K03086 | rpoD | RNA polymerase, sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor | |
| > bmv:BMASAVP1_1520(736) | 735 | 71.3 | 3322 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpl:BURPS1106A_A2384(736) | 735 | 71.3 | 3322 | 9 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |
| > bpm:BURPS1710b_A0833(800) | 735 | 71.3 | 3322 | 89 | <- | K03086 | rpoD | rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor | |