KEGG   PATHWAY: chx04622
Entry
chx04622                    Pathway                                
Name
RIG-I-like receptor signaling pathway - Capra hircus (goat)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
chx04622  RIG-I-like receptor signaling pathway
chx04622

Organism
Capra hircus (goat) [GN:chx]
Gene
100860845  IL12B; interleukin-12 subunit beta precursor [KO:K05425]
100860850  IFNA; interferon-alpha precursor [KO:K05414]
100860873  CXCL10; C-X-C motif chemokine 10 precursor [KO:K12671]
100860996  MAPK13; mitogen-activated protein kinase 13 [KO:K04441] [EC:2.7.11.24]
100861087  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
100861232  TNF; tumor necrosis factor [KO:K03156]
100861293  IL12A; interleukin-12 subunit alpha precursor [KO:K05406]
102168537  IFNK; interferon kappa [KO:K05441]
102169137  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
102169291  ATG5; autophagy protein 5 isoform X1 [KO:K08339]
102169919  CASP8; caspase-8 isoform X1 [KO:K04398] [EC:3.4.22.61]
102169982  ISG15; ubiquitin-like protein ISG15 [KO:K12159]
102170408  MAPK9; mitogen-activated protein kinase 9 isoform X1 [KO:K04440] [EC:2.7.11.24]
102170760  FADD; FAS-associated death domain protein [KO:K02373]
102171046  OTUD5; OTU domain-containing protein 5 isoform X1 [KO:K12655] [EC:3.4.19.12]
102171058  STING1; stimulator of interferon genes protein [KO:K12654]
102171588  DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 [KO:K11594] [EC:5.6.2.7]
102171591  IKBKG; NF-kappa-B essential modulator isoform X1 [KO:K07210]
102171742  TRAF3; TNF receptor-associated factor 3 [KO:K03174]
102171811  IRF3; interferon regulatory factor 3 isoform X1 [KO:K05411]
102172585  ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 [KO:K12968] [EC:3.5.4.37]
102172659  TBKBP1; TANK-binding kinase 1-binding protein 1 isoform X1 [KO:K12652]
102172719  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X2 [KO:K04427] [EC:2.7.11.25]
102172830  TRAF6; TNF receptor-associated factor 6 isoform X1 [KO:K03175] [EC:2.3.2.27]
102173368  TKFC; triokinase/FMN cyclase [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
102174096  RELA; transcription factor p65 [KO:K04735]
102174516  AZI2; 5-azacytidine-induced protein 2 isoform X2 [KO:K12651]
102174842  [KO:K05414]
102175496  NLRX1; NLR family member X1 isoform X1 [KO:K12653]
102175660  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580]
102177059  IFNE; interferon epsilon [KO:K05442]
102177406  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
102178068  [KO:K05440]
102178286  MAVS; mitochondrial antiviral-signaling protein isoform X1 [KO:K12648]
102178353  [KO:K05440]
102178407  RIPK1; receptor-interacting serine/threonine-protein kinase 1 isoform X1 [KO:K02861] [EC:2.7.11.1]
102178438  CXCL8; interleukin-8 [KO:K10030]
102179035  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD isoform X1 [KO:K08601] [EC:3.4.19.12]
102179668  [KO:K05440]
102179943  [KO:K05414]
102180248  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X1 [KO:K03171]
102180392  [KO:K05440]
102180492  [KO:K05440]
102180761  [KO:K05414]
102180926  MAPK12; mitogen-activated protein kinase 12 isoform X1 [KO:K04441] [EC:2.7.11.24]
102181262  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
102181299  [KO:K05414]
102181421  NFKBIB; NF-kappa-B inhibitor beta isoform X1 [KO:K02581]
102181474  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
102181595  [KO:K05415]
102181625  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 [KO:K10652] [EC:2.3.2.27]
102181867  [KO:K05415]
102182774  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
102183188  IFIH1; interferon-induced helicase C domain-containing protein 1 [KO:K12647] [EC:5.6.2.6]
102183788  DDX58; probable ATP-dependent RNA helicase DDX58 [KO:K12646] [EC:5.6.2.6]
102183809  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
102183820  DHX58; probable ATP-dependent RNA helicase DHX58 isoform X1 [KO:K12649] [EC:5.6.2.6]
102184255  TRAF2; TNF receptor-associated factor 2 isoform X1 [KO:K03173] [EC:2.3.2.27]
102184510  MAPK11; mitogen-activated protein kinase 11 isoform X1 [KO:K04441] [EC:2.7.11.24]
102185736  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
102185959  TANK; TRAF family member-associated NF-kappa-B activator isoform X3 [KO:K12650]
102186731  SIKE1; suppressor of IKBKE 1 [KO:K12656]
102187179  RNF125; E3 ubiquitin-protein ligase RNF125 [KO:K12170] [EC:2.3.2.27]
102187530  MAP3K1; mitogen-activated protein kinase kinase kinase 1 isoform X2 [KO:K04416] [EC:2.7.11.25]
102189174  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
102189208  [KO:K05415]
102189600  ZNFX1; NFX1-type zinc finger-containing protein 1 [KO:K27391]
102190519  ATG12; ubiquitin-like protein ATG12 [KO:K08336]
106503773  IRF7; interferon regulatory factor 7 [KO:K09447]
108633160  [KO:K05414]
108633243  [KO:K05415]
108633271  [KO:K05440]
108634604  [KO:K05440]
108634620  [KO:K11594] [EC:5.6.2.7]
108634662  [KO:K05440]
108634918  [KO:K05440]
108634973  [KO:K05440]
108634976  [KO:K05440]
108635000  [KO:K05440]
108635001  [KO:K05440]
108635144  [KO:K05440]
108635454  [KO:K05440]
108635455  [KO:K05440]
108635503  [KO:K05440]
108635507  [KO:K05440]
108635529  [KO:K05414]
108635561  [KO:K05440]
108636544  [KO:K05415]
108636595  [KO:K05440]
108636612  [KO:K05440]
108636613  [KO:K05440]
108636615  [KO:K05440]
108636616  [KO:K05440]
108636617  [KO:K05440]
108636618  [KO:K05440]
108636620  [KO:K05440]
108636621  [KO:K05414]
108636623  [KO:K05440]
108636624  [KO:K05440]
108636625  [KO:K05440]
108636626  [KO:K05440]
108636627  [KO:K05414]
108636628  [KO:K05440]
108636629  [KO:K05415]
108636630  [KO:K05440]
108636632  [KO:K05415]
108636634  [KO:K05415]
108638216  [KO:K10652] [EC:2.3.2.27]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
chx04010  MAPK signaling pathway
chx04120  Ubiquitin mediated proteolysis
chx04210  Apoptosis
chx04630  JAK-STAT signaling pathway
KO pathway
ko04622   

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