Entry
Name
Endocytosis - Myotis lucifugus (little brown bat)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Other DBs
Organism
Myotis lucifugus (little brown bat) [GN:
mlf ]
Gene
102417109 RAB11FIP4; rab11 family-interacting protein 4 isoform X2 [KO:K12485 ]
102417230 AGAP1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 [KO:K12491 ]
102417602 DNAJC6; putative tyrosine-protein phosphatase auxilin isoform X4 [KO:K09526 ]
102417721 STAM2; signal transducing adapter molecule 2 isoform X1 [KO:K04705 ]
102418388 PARD6A; LOW QUALITY PROTEIN: partitioning defective 6 homolog alpha [KO:K06093 ]
102418680 ASAP3; LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 [KO:K12488 ]
102418894 ARAP1; LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 [KO:K18439 ]
102419481 VPS26A; vacuolar protein sorting-associated protein 26A isoform X3 [KO:K18466 ]
102420320 IL2RB; LOW QUALITY PROTEIN: interleukin-2 receptor subunit beta [KO:K05069 ]
102420602 WIPF1; LOW QUALITY PROTEIN: WAS/WASL-interacting protein family member 1 [KO:K19475 ]
102421376 CHMP2B; charged multivesicular body protein 2b isoform X2 [KO:K12192 ]
102421637 ACAP1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12489 ]
102422305 PARD6G; partitioning defective 6 homolog gamma isoform X1 [KO:K06093 ]
102422428 VPS36; vacuolar protein-sorting-associated protein 36 isoform X2 [KO:K12190 ]
102422692 AGAP2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 [KO:K17848 ]
102422818 ZFYVE16; zinc finger FYVE domain-containing protein 16 isoform X1 [KO:K04679 ]
102423612 SMAP2; stromal membrane-associated protein 2 isoform X1 [KO:K12486 ]
102424003 ASAP1; LOW QUALITY PROTEIN: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 [KO:K12488 ]
102424039 CHMP2A; charged multivesicular body protein 2a isoform X1 [KO:K12191 ]
102424494 VPS37D; vacuolar protein sorting-associated protein 37D [KO:K12185 ]
102424857 CHMP7; charged multivesicular body protein 7 isoform X1 [KO:K15053 ]
102425222 ARFGAP3; ADP-ribosylation factor GTPase-activating protein 3 isoform X1 [KO:K12493 ]
102425230 CHMP3; charged multivesicular body protein 3 isoform X1 [KO:K12193 ]
102425430 SMAP1; LOW QUALITY PROTEIN: stromal membrane-associated protein 1 [KO:K12486 ]
102425639 EPS15; LOW QUALITY PROTEIN: epidermal growth factor receptor substrate 15 [KO:K12472 ]
102426085 ARFGAP2; ADP-ribosylation factor GTPase-activating protein 2 [KO:K12493 ]
102426586 AP2A2; LOW QUALITY PROTEIN: AP-2 complex subunit alpha-2 [KO:K11824 ]
102427262 VPS26B; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
102427441 ARFGEF1; LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
102427591 VPS37B; LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 37B [KO:K12185 ]
102427892 SMAD3; mothers against decapentaplegic homolog 3 isoform X1 [KO:K23605 ]
102428154 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1 isoform X2 [KO:K12492 ]
102429119 VPS37A; vacuolar protein sorting-associated protein 37A isoform X2 [KO:K12185 ]
102429502 VPS4A; vacuolar protein sorting-associated protein 4A [KO:K12196 ]
102429768 SMAD2; mothers against decapentaplegic homolog 2 isoform X1 [KO:K04500 ]
102429806 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
102429884 ZFYVE9; zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
102429927 VPS45; vacuolar protein sorting-associated protein 45 isoform X1 [KO:K12479 ]
102430776 AGAP3; LOW QUALITY PROTEIN: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 [KO:K12491 ]
102431272 IQSEC3; IQ motif and SEC7 domain-containing protein 3 [KO:K12495 ]
102431457 ARAP2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 [KO:K18440 ]
102432317 ARFGEF2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1 [KO:K18442 ]
102432506 LDLR; LOW QUALITY PROTEIN: low-density lipoprotein receptor [KO:K12473 ]
102432927 VPS4B; vacuolar protein sorting-associated protein 4B isoform X1 [KO:K12196 ]
102434263 RAB11FIP1; rab11 family-interacting protein 1 isoform X1 [KO:K12484 ]
102434273 PDCD6IP; programmed cell death 6-interacting protein isoform X2 [KO:K12200 ]
102434881 VTA1; vacuolar protein sorting-associated protein VTA1 homolog isoform X1 [KO:K12199 ]
102435213 SH3KBP1; SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
102435477 CHMP4C; LOW QUALITY PROTEIN: charged multivesicular body protein 4c [KO:K24782 ]
102435868 VPS29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
102436129 ARAP3; LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 [KO:K12490 ]
102436544 IGF2R; LOW QUALITY PROTEIN: cation-independent mannose-6-phosphate receptor [KO:K06564 ]
102436759 AP2A1; LOW QUALITY PROTEIN: AP-2 complex subunit alpha-1 [KO:K11824 ]
102437210 GBF1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X2 [KO:K18443 ]
102437417 ARPC5L; actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
102437446 LDLRAP1; low density lipoprotein receptor adapter protein 1 isoform X1 [KO:K12474 ]
102437652 RABEP1; LOW QUALITY PROTEIN: rab GTPase-binding effector protein 1 [KO:K12480 ]
102437663 ACAP2; LOW QUALITY PROTEIN: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 [KO:K12489 ]
102437696 VPS35; vacuolar protein sorting-associated protein 35 [KO:K18468 ]
102438222 GIT1; LOW QUALITY PROTEIN: ARF GTPase-activating protein GIT1 [KO:K05737 ]
102438612 WIPF3; WAS/WASL-interacting protein family member 3 isoform X1 [KO:K19475 ]
102438646 IQSEC2; IQ motif and SEC7 domain-containing protein 2 [KO:K12495 ]
102438658 EPS15L1; epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
102439024 CDC42; cell division control protein 42 homolog isoform X1 [KO:K04393 ]
102439881 STAM; signal transducing adapter molecule 1 isoform X1 [KO:K04705 ]
102441277 IQSEC1; IQ motif and SEC7 domain-containing protein 1 isoform X2 [KO:K12495 ]
102443000 VPS25; vacuolar protein-sorting-associated protein 25 isoform X1 [KO:K12189 ]
102443036 PIP5KL1; LOW QUALITY PROTEIN: phosphatidylinositol 4-phosphate 5-kinase-like protein 1 [KO:K13712 ] [EC:2.7.1.68 ]
106694368 ARPC4; actin-related protein 2/3 complex subunit 4 isoform X1 [KO:K05755 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
mlf04060 Cytokine-cytokine receptor interaction
mlf04070 Phosphatidylinositol signaling system
mlf04130 SNARE interactions in vesicular transport
KO pathway