KEGG   PATHWAY: osa00240
Entry
osa00240                    Pathway                                
Name
Pyrimidine metabolism - Oryza sativa japonica (Japanese rice)
Class
Metabolism; Nucleotide metabolism
Pathway map
osa00240  Pyrimidine metabolism
osa00240

Module
osa_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:osa00240]
osa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:osa00240]
osa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:osa00240]
osa_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:osa00240]
Other DBs
GO: 0006220 0006213
Organism
Oryza sativa japonica (Japanese rice) [GN:osa]
Gene
107275437  [KO:K01937] [EC:6.3.4.2]
4324172  [KO:K01937] [EC:6.3.4.2]
4324465  [KO:K09903] [EC:2.7.4.22]
4325542  DHOase; dihydroorotase, mitochondrial [KO:K01465] [EC:3.5.2.3]
4325739  OsJ_04774; uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
4325740  UMPS2; uridine 5'-monophosphate synthase [KO:K13421] [EC:2.4.2.10 4.1.1.23]
4325937  [KO:K01489] [EC:3.5.4.5]
4326346  CARB; carbamoyl phosphate synthase arginine-specific large chain, chloroplastic [KO:K01955] [EC:6.3.5.5]
4326555  [KO:K07023] [EC:3.1.3.89]
4326656  [KO:K01937] [EC:6.3.4.2]
4326895  [KO:K01493] [EC:3.5.4.12]
4327327  [KO:K01513] [EC:3.1.4.1 3.6.1.9]
4327558  [KO:K01464] [EC:3.5.2.2]
4327823  [KO:K03787] [EC:3.1.3.5 3.1.3.6]
4328498  [KO:K07023] [EC:3.1.3.89]
4328991  [KO:K00876] [EC:2.7.1.48]
4329363  [KO:K16904] [EC:3.6.1.12]
4330474  49D11.14; carbamoyl phosphate synthase small chain, chloroplastic isoform 1 [KO:K01956] [EC:6.3.5.5]
4330475  [KO:K00876] [EC:2.7.1.48]
4330657  [KO:K00207] [EC:1.3.1.2]
4330910  [KO:K13800] [EC:2.7.4.14]
4331059  [KO:K10807] [EC:1.17.4.1]
4331376  TK; thymidine kinase isoform 1 [KO:K00857] [EC:2.7.1.21]
4332721  ADPase; probable apyrase 1 [KO:K14641] [EC:3.6.1.5]
4332967  [KO:K01510] [EC:3.6.1.5]
4333153  [KO:K01240] [EC:3.2.2.3]
4333582  [KO:K24242]
4333679  [KO:K01520] [EC:3.6.1.23]
4334909  [KO:K13800] [EC:2.7.4.14]
4335533  [KO:K16904] [EC:3.6.1.12]
4336398  [KO:K16904] [EC:3.6.1.12]
4337396  OsJ_16613; dihydroorotate dehydrogenase (quinone), mitochondrial [KO:K00254] [EC:1.3.5.2]
4338981  [KO:K00761] [EC:2.4.2.9]
4339675  [KO:K01937] [EC:6.3.4.2]
4339815  [KO:K00940] [EC:2.7.4.6]
4339882  OsJ_19856; uMP-CMP kinase 1 isoform X2 [KO:K13800] [EC:2.7.4.14]
4339981  [KO:K10808] [EC:1.17.4.1]
4340258  [KO:K10807] [EC:1.17.4.1]
4342678  [KO:K03787] [EC:3.1.3.5 3.1.3.6]
4343249  [KO:K01431] [EC:3.5.1.6]
4343275  NDKR; nucleoside diphosphate kinase 1 [KO:K00940] [EC:2.7.4.6]
4343960  ura6; uMP-CMP kinase 3 [KO:K13800] [EC:2.7.4.14]
4344056  [KO:K00943] [EC:2.7.4.9]
4344315  ADPase; probable apyrase 2 [KO:K14641] [EC:3.6.1.5]
4345071  ATCase; aspartate carbamoyltransferase, chloroplastic [KO:K00609] [EC:2.1.3.2]
4345665  [KO:K01510] [EC:3.6.1.5]
4345970  [KO:K16329] [EC:4.2.1.70]
4346121  [KO:K00876] [EC:2.7.1.48]
4346302  OsJ_28263; probable uridine nucleosidase 1 [KO:K01240] [EC:3.2.2.3]
4347509  [KO:K00876] [EC:2.7.1.48]
4347891  OsJ_30393; probable uridine nucleosidase 2 [KO:K01240] [EC:3.2.2.3]
4349403  [KO:K00940] [EC:2.7.4.6]
4349643  [KO:K14641] [EC:3.6.1.5]
4349645  [KO:K14641] [EC:3.6.1.5]
4349647  [KO:K14641] [EC:3.6.1.5]
4350243  [KO:K00876] [EC:2.7.1.48]
4350420  [KO:K14641] [EC:3.6.1.5]
4350421  [KO:K14641] [EC:3.6.1.5]
4350527  [KO:K13998] [EC:1.5.1.3 2.1.1.45]
4351367  ADPase; probable apyrase 3 precursor 1 precursor [KO:K14641] [EC:3.6.1.5]
4352460  [KO:K00940] [EC:2.7.4.6]
4352499  [KO:K01937] [EC:6.3.4.2]
9266846  [KO:K10808] [EC:1.17.4.1]
9267059  [KO:K13800] [EC:2.7.4.14]
9271078  [KO:K13998] [EC:1.5.1.3 2.1.1.45]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
osa00030  Pentose phosphate pathway
osa00220  Arginine biosynthesis
osa00250  Alanine, aspartate and glutamate metabolism
osa00280  Valine, leucine and isoleucine degradation
osa00410  beta-Alanine metabolism
KO pathway
ko00240   

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