Entry
Name
Endocytosis - Lemur catta (Ring-tailed lemur)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Lemur catta (Ring-tailed lemur) [GN:
lcat ]
Gene
123648366 ZFYVE16; zinc finger FYVE domain-containing protein 16 [KO:K04679 ]
123635652 ZFYVE9; zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
123631693 SMAD3; mothers against decapentaplegic homolog 3 isoform X1 [KO:K23605 ]
123643971 BIN1; myc box-dependent-interacting protein 1 isoform X1 [KO:K12562 ]
123638020 EPS15L1; epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
123635660 EPS15; epidermal growth factor receptor substrate 15 isoform X1 [KO:K12472 ]
123634390 LDLRAP1; low density lipoprotein receptor adapter protein 1 isoform X1 [KO:K12474 ]
123623074 ARPC4; actin-related protein 2/3 complex subunit 4 isoform X1 [KO:K05755 ]
123646053 ARPC5L; actin-related protein 2/3 complex subunit 5-like protein isoform X1 [KO:K05754 ]
123643412 WIPF1; LOW QUALITY PROTEIN: WAS/WASL-interacting protein family member 1 [KO:K19475 ]
123620864 WIPF2; WAS/WASL-interacting protein family member 2 isoform X1 [KO:K19475 ]
123647169 LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein-like [KO:K03283 ]
123635556 DNAJC6; putative tyrosine-protein phosphatase auxilin isoform X1 [KO:K09526 ]
123635905 CAPZB; F-actin-capping protein subunit beta isoform X1 [KO:K10365 ]
123626061 VPS29; vacuolar protein sorting-associated protein 29 isoform X1 [KO:K18467 ]
123641135 VPS26B; vacuolar protein sorting-associated protein 26B [KO:K18466 ]
123650429 VPS26A; vacuolar protein sorting-associated protein 26A [KO:K18466 ]
123625137 VPS35; vacuolar protein sorting-associated protein 35 [KO:K18468 ]
123625652 RAB7A; LOW QUALITY PROTEIN: ras-related protein Rab-7a [KO:K07897 ]
123650696 HGS; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182 ]
123625692 STAM; signal transducing adapter molecule 1 isoform X1 [KO:K04705 ]
123643613 LOW QUALITY PROTEIN: signal transducing adapter molecule 2-like [KO:K04705 ]
123643663 STAM2; signal transducing adapter molecule 2 isoform X1 [KO:K04705 ]
123642509 TSG101; tumor susceptibility gene 101 protein isoform X1 [KO:K12183 ]
123644855 VPS28; vacuolar protein sorting-associated protein 28 homolog [KO:K12184 ]
123632619 VPS37D; vacuolar protein sorting-associated protein 37D isoform X1 [KO:K12185 ]
123626106 VPS37B; vacuolar protein sorting-associated protein 37B [KO:K12185 ]
123626500 VPS37A; vacuolar protein sorting-associated protein 37A isoform X1 [KO:K12185 ]
123642777 VPS37C; vacuolar protein sorting-associated protein 37C isoform X1 [KO:K12185 ]
123649285 VPS36; vacuolar protein-sorting-associated protein 36 [KO:K12190 ]
123620975 VPS25; vacuolar protein-sorting-associated protein 25 [KO:K12189 ]
123650838 CHMP4A; charged multivesicular body protein 4a isoform X1 [KO:K12194 ]
123645176 CHMP4C; charged multivesicular body protein 4c isoform X1 [KO:K24782 ]
123624760 CHMP2A; charged multivesicular body protein 2a isoform X1 [KO:K12191 ]
123626493 CHMP7; charged multivesicular body protein 7 isoform X1 [KO:K15053 ]
123621873 VPS4B; vacuolar protein sorting-associated protein 4B [KO:K12196 ]
123625158 VPS4A; vacuolar protein sorting-associated protein 4A isoform X1 [KO:K12196 ]
123633324 VTA1; vacuolar protein sorting-associated protein VTA1 homolog [KO:K12199 ]
123627571 programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
123633432 IGF2R; cation-independent mannose-6-phosphate receptor [KO:K06564 ]
123623027 IL2RA; interleukin-2 receptor subunit alpha isoform X1 [KO:K05068 ]
123631673 class I histocompatibility antigen, Gogo-B*0102 alpha chain-like isoform X1 [KO:K06751 ]
123631675 patr class I histocompatibility antigen, B-2 alpha chain-like isoform X1 [KO:K06751 ]
123631677 patr class I histocompatibility antigen, A-2 alpha chain-like [KO:K06751 ]
123631716 HLA class I histocompatibility antigen, alpha chain G-like isoform X1 [KO:K06751 ]
123650826 RABEP1; rab GTPase-binding effector protein 1 isoform X1 [KO:K12480 ]
123621812 RUFY1; RUN and FYVE domain-containing protein 1 isoform X1 [KO:K12482 ]
123650248 RUFY2; RUN and FYVE domain-containing protein 2 isoform X1 [KO:K12482 ]
123633919 VPS45; vacuolar protein sorting-associated protein 45 [KO:K12479 ]
123637043 RAB11FIP5; rab11 family-interacting protein 5 isoform X1 [KO:K12484 ]
123649778 RAB11FIP2; rab11 family-interacting protein 2 isoform X1 [KO:K12484 ]
123626689 RAB11FIP1; rab11 family-interacting protein 1 isoform X1 [KO:K12484 ]
123620305 RAB11FIP4; rab11 family-interacting protein 4 isoform X1 [KO:K12485 ]
123625220 PARD6A; partitioning defective 6 homolog alpha isoform X1 [KO:K06093 ]
123632988 SMAP1; stromal membrane-associated protein 1 isoform X1 [KO:K12486 ]
123635696 SMAP2; stromal membrane-associated protein 2 isoform X1 [KO:K12486 ]
123645037 ASAP1; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12488 ]
123634428 ASAP3; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12488 ]
123636579 ASAP2; arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
123630414 ACAP2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 [KO:K12489 ]
123650866 ACAP1; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12489 ]
123636025 ACAP3; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12489 ]
123641071 ARAP1; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
123637355 ARAP2; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K18440 ]
123637906 ARAP3; arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
123644160 AGAP1; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12491 ]
123647510 AGAP3; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
123639591 AGAP2; arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
123622770 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1 [KO:K12492 ]
123640270 ARFGAP3; ADP-ribosylation factor GTPase-activating protein 3 [KO:K12493 ]
123642662 ARFGAP2; ADP-ribosylation factor GTPase-activating protein 2 isoform X1 [KO:K12493 ]
123637162 PSD4; PH and SEC7 domain-containing protein 4 isoform X1 [KO:K12494 ]
123626344 PSD3; PH and SEC7 domain-containing protein 3 isoform X1 [KO:K12494 ]
123638124 IQSEC1; IQ motif and SEC7 domain-containing protein 1 isoform X1 [KO:K12495 ]
123640212 IQSEC3; IQ motif and SEC7 domain-containing protein 3 isoform X1 [KO:K12495 ]
123628038 IQSEC2; IQ motif and SEC7 domain-containing protein 2 isoform X1 [KO:K12495 ]
123644466 ARFGEF1; brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
123622697 ARFGEF2; brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1 [KO:K18442 ]
123650088 GBF1; Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [KO:K18443 ]
123620563 ARL17A; LOW QUALITY PROTEIN: ADP-ribosylation factor-like 17-like [KO:K07937 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
lcat04060 Cytokine-cytokine receptor interaction
lcat04070 Phosphatidylinositol signaling system
lcat04130 SNARE interactions in vesicular transport
KO pathway
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