PATHWAY: rn01110 Help Entry rn01110           Global    Pathway                                 Name Biosynthesis of secondary metabolites Pathway map rn01110   Biosynthesis of secondary metabolites Module M00012   Glyoxylate cycle [PATH:rn01110] M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rn01110] M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rn01110] M00021   Cysteine biosynthesis, serine => cysteine [PATH:rn01110] M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rn01110] M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rn01110] M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rn01110] M00026   Histidine biosynthesis, PRPP => histidine [PATH:rn01110] M00039   Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:rn01110] M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:rn01110] M00095   C5 isoprenoid biosynthesis, mevalonate pathway [PATH:rn01110] M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:rn01110] M00097   beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:rn01110] M00102   Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol [PATH:rn01110] M00112   Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:rn01110] M00113   Jasmonic acid biosynthesis [PATH:rn01110] M00114   Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:rn01110] M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:rn01110] M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:rn01110] M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rn01110] M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rn01110] M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:rn01110] M00137   Flavanone biosynthesis, phenylalanine => naringenin [PATH:rn01110] M00138   Flavonoid biosynthesis, naringenin => pelargonidin [PATH:rn01110] M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:rn01110] M00365   C10-C20 isoprenoid biosynthesis, archaea [PATH:rn01110] M00366   C10-C20 isoprenoid biosynthesis, plants [PATH:rn01110] M00367   C10-C20 isoprenoid biosynthesis, non-plant eukaryotes [PATH:rn01110] M00368   Ethylene biosynthesis, methionine => ethylene [PATH:rn01110] M00369   Cyanogenic glycoside biosynthesis, tyrosine => dhurrin [PATH:rn01110] M00370   Glucosinolate biosynthesis, tryptophan => glucobrassicin [PATH:rn01110] M00371   Castasterone biosynthesis, campesterol => castasterone [PATH:rn01110] M00372   Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:rn01110] M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rn01110] M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:rn01110] M00532   Photorespiration [PATH:rn01110] M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:rn01110] M00661   Paspaline biosynthesis, geranylgeranyl-PP + indoleglycerol phosphate => paspaline [PATH:rn01110] M00672   Penicillin biosynthesis, aminoadipate + cycteine + valine => penicillin [PATH:rn01110] M00673   Cephamycin C biosynthesis, aminoadipate + cycteine + valine => cephamycin C [PATH:rn01110] M00674   Clavaminate biosynthesis, arginine + glyceraldehyde-3P => clavaminate [PATH:rn01110] M00675   Carbapenem-3-carboxylate biosynthesis, pyrroline-5-carboxylate + malonyl-CoA => carbapenem-3-carboxylate [PATH:rn01110] M00736   Nocardicin A biosynthesis, L-pHPG + arginine + serine => nocardicin A [PATH:rn01110] M00773   Tylosin biosynthesis, methylmalonyl-CoA + malonyl-CoA => tylactone => tylosin [PATH:rn01110] M00774   Erythromycin biosynthesis, propanoyl-CoA + methylmalonyl-CoA => deoxyerythronolide B => erythromycin A/B [PATH:rn01110] M00775   Oleandomycin biosynthesis, malonyl-CoA + methylmalonyl-CoA => 8,8a-deoxyoleandolide => oleandomycin [PATH:rn01110] M00776   Pikromycin/methymycin biosynthesis, methylmalonyl-CoA + malonyl-CoA => narbonolide/10-deoxymethynolide => pikromycin/methymycin [PATH:rn01110] M00777   Avermectin biosynthesis, 2-methylbutanoyl-CoA/isobutyryl-CoA => 6,8a-Seco-6,8a-deoxy-5-oxoavermectin 1a/1b aglycone => avermectin A1a/B1a/A1b/B1b [PATH:rn01110] M00778   Type II polyketide backbone biosynthesis, acyl-CoA + malonyl-CoA => polyketide [PATH:rn01110] M00779   Dihydrokalafungin biosynthesis, octaketide => dihydrokalafungin [PATH:rn01110] M00780   Tetracycline/oxytetracycline biosynthesis, pretetramide => tetracycline/oxytetracycline [PATH:rn01110] M00781   Nogalavinone/aklavinone biosynthesis, deoxynogalonate/deoxyaklanonate => nogalavinone/aklavinone [PATH:rn01110] M00782   Mithramycin biosynthesis, 4-demethylpremithramycinone => mithramycin [PATH:rn01110] M00783   Tetracenomycin C/8-demethyltetracenomycin C biosynthesis, tetracenomycin F2 => tetracenomycin C/8-demethyltetracenomycin C [PATH:rn01110] M00784   Elloramycin biosynthesis, 8-demethyltetracenomycin C => elloramycin A [PATH:rn01110] M00785   Cycloserine biosynthesis, arginine/serine => cycloserine [PATH:rn01110] M00786   Fumitremorgin alkaloid biosynthesis, tryptophan + proline => fumitremorgin C/A [PATH:rn01110] M00787   Bacilysin biosynthesis, prephenate => bacilysin [PATH:rn01110] M00788   Terpentecin biosynthesis, GGAP => terpentecin [PATH:rn01110] M00789   Rebeccamycin biosynthesis, tryptophan => rebeccamycin [PATH:rn01110] M00790   Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin [PATH:rn01110] M00793   dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha [PATH:rn01110] M00794   dTDP-6-deoxy-D-allose biosynthesis [PATH:rn01110] M00795   dTDP-beta-L-noviose biosynthesis [PATH:rn01110] M00796   dTDP-D-mycaminose biosynthesis [PATH:rn01110] M00797   dTDP-D-desosamine biosynthesis [PATH:rn01110] M00798   dTDP-L-mycarose biosynthesis [PATH:rn01110] M00799   dTDP-L-oleandrose biosynthesis [PATH:rn01110] M00800   dTDP-L-megosamine biosynthesis [PATH:rn01110] M00801   dTDP-L-olivose biosynthesis [PATH:rn01110] M00802   dTDP-D-forosamine biosynthesis [PATH:rn01110] M00803   dTDP-D-angolosamine biosynthesis [PATH:rn01110] M00805   Staurosporine biosynthesis, tryptophan => staurosporine [PATH:rn01110] M00808   Violacein biosynthesis, tryptophan => violacein [PATH:rn01110] M00814   Acarbose biosynthesis, sedoheptulopyranose-7P => acarbose [PATH:rn01110] M00815   Validamycin A biosynthesis, sedoheptulopyranose-7P => validamycin A [PATH:rn01110] M00819   Pentalenolactone biosynthesis, farnesyl-PP => pentalenolactone [PATH:rn01110] M00823   Chlortetracycline biosynthesis, pretetramide => chlortetracycline [PATH:rn01110] M00824   9-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 9-membered enediyne core [PATH:rn01110] M00825   10-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 10-membered enediyne core [PATH:rn01110] M00826   C-1027 benzoxazolinate moiety biosynthesis, chorismate => benzoxazolinyl-CoA [PATH:rn01110] M00827   C-1027 beta-amino acid moiety biosynthesis, tyrosine => 3-chloro-4,5-dihydroxy-beta-phenylalanyl-PCP [PATH:rn01110] M00828   Maduropeptin beta-hydroxy acid moiety biosynthesis, tyrosine => 3-(4-hydroxyphenyl)-3-oxopropanoyl-PCP [PATH:rn01110] M00829   3,6-Dimethylsalicylyl-CoA biosynthesis, malonyl-CoA => 6-methylsalicylate => 3,6-dimethylsalicylyl-CoA [PATH:rn01110] M00830   Neocarzinostatin naphthoate moiety biosynthesis, malonyl-CoA => 2-hydroxy-5-methyl-1-naphthoate => 2-hydroxy-7-methoxy-5-methyl-1-naphthoyl-CoA [PATH:rn01110] M00831   Kedarcidin 2-hydroxynaphthoate moiety biosynthesis, malonyl-CoA => 3,6,8-trihydroxy-2-naphthoate => 3-hydroxy-7,8-dimethoxy-6-isopropoxy-2-naphthoyl-CoA [PATH:rn01110] M00832   Kedarcidin 2-aza-3-chloro-beta-tyrosine moiety biosynthesis, azatyrosine => 2-aza-3-chloro-beta-tyrosyl-PCP [PATH:rn01110] M00833   Calicheamicin biosynthesis, calicheamicinone => calicheamicin [PATH:rn01110] M00834   Calicheamicin orsellinate moiety biosynthesis, malonyl-CoA => orsellinate-ACP => 5-iodo-2,3-dimethoxyorsellinate-ACP [PATH:rn01110] M00835   Pyocyanine biosynthesis, chorismate => pyocyanine [PATH:rn01110] M00837   Prodigiosin biosynthesis, L-proline => prodigiosin [PATH:rn01110] M00838   Undecylprodigiosin biosynthesis, L-proline => undecylprodigiosin [PATH:rn01110] M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:rn01110] M00847   Heme biosynthesis, archaea, siroheme => heme [PATH:rn01110] M00848   Aurachin biosynthesis, anthranilate => aurachin A [PATH:rn01110] M00849   C5 isoprenoid biosynthesis, mevalonate pathway, archaea [PATH:rn01110] M00868   Heme biosynthesis, animals and fungi, glycine => heme [PATH:rn01110] M00875   Staphyloferrin B biosynthesis, L-serine => staphyloferrin B [PATH:rn01110] M00876   Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A [PATH:rn01110] M00877   Kanosamine biosynthesis, glucose 6-phosphate => kanosamine [PATH:rn01110] M00889   Puromycin biosynthesis, ATP => puromycin [PATH:rn01110] M00890   Roseoflavin biosynthesis, FMN => roseoflavin [PATH:rn01110] M00891   Ditryptophenaline biosynthesis, tryptophan + phenylalanine => ditryptophenaline [PATH:rn01110] M00893   Lovastatin biosynthesis, malonyl-CoA => lovastatin acid [PATH:rn01110] M00894   Cannabidiol biosynthesis, malonyl-CoA => cannabidiol/dronabinol [PATH:rn01110] M00900   Crocin biosynthesis, crocetin => crocin [PATH:rn01110] M00901   Fumiquinazoline biosynthesis, tryptophan + alanine + anthranilate => fumiquinazoline [PATH:rn01110] M00902   Podophyllotoxin biosynthesis, coniferyl alcohol => podophyllotoxin [PATH:rn01110] M00903   Fosfomycin biosynthesis, phosphoenolpyruvate => fosfomycin [PATH:rn01110] M00904   Dapdiamides biosynthesis, L-2,3-diaminopropanoate => dapdiamide A/B/C [PATH:rn01110] M00905   Grixazone biosynthesis, aspartate 4-semialdehyde => grixazone B [PATH:rn01110] M00906   Ethynylserine biosynthesis, lysine => ethynylserine [PATH:rn01110] M00910   Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:rn01110] M00917   Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:rn01110] M00918   Aerobactin biosynthesis, lysine => aerobactin [PATH:rn01110] M00921   Cyclooctatin biosynthesis, dimethylallyl-PP + isopentenyl-PP => cyclooctatin [PATH:rn01110] M00927   Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:rn01110] M00928   Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:rn01110] M00929   Gibberellin A1 biosynthesis, GGPP => GA1 [PATH:rn01110] M00932   Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:rn01110] M00933   Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:rn01110] M00934   Mycinamicin biosynthesis, malonyl-CoA + methylmalonyl-CoA => protomycinolide IV => mycinamicin II [PATH:rn01110] M00936   Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:rn01110] M00937   Aflatoxin biosynthesis, malonyl-CoA => aflatoxin B1 [PATH:rn01110] M00940   Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:rn01110] M00941   Isoflavone biosynthesis, liquiritigenin/naringenin => daidzein/genistein [PATH:rn01110] M00942   Pterocarpan biosynthesis, daidzein => medicarpin [PATH:rn01110] M00943   Reticuline biosynthesis, dopamine + 4HPAA => (S)-reticuline [PATH:rn01110] M00944   Morphine biosynthesis, (S)-reticuline => morphine [PATH:rn01110] M00945   Sanguinarine biosynthesis, (S)-reticuline => sanguinarine [PATH:rn01110] M00946   Noscapine biosynthesis, (S)-reticuline => noscapine [PATH:rn01110] M00951   Cremeomycin biosynthesis, aspartate/3,4-AHBA => cremeomycin [PATH:rn01110] M00952   Benzoxazinoid biosynthesis, indoleglycerol phosphate => DIMBOA-glucoside [PATH:rn01110] M00953   Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid [PATH:rn01110] M00961   Betacyanin biosynthesis, L-tyrosine => amaranthin [PATH:rn01110] M00962   Psilocybin biosynthesis, tryptophan => psilocybin [PATH:rn01110] M00963   Chanoclavine aldehyde biosynthesis, tryptophan => chanoclavine-I aldehyde [PATH:rn01110] M00964   Fumigaclavine biosynthesis, chanoclavine-I aldehyde => fumigaclavine C [PATH:rn01110] M00965   Vinblastine biosynthesis, geissoschizine => vinblastine [PATH:rn01110] M00969   Fumagillin biosynthesis, farnesyl-PP => fumagillin [PATH:rn01110] M00971   QS-7 biosynthesis, 2,3-epoxysqualene => QS-7 [PATH:rn01110] M00978   Ornithine-ammonia cycle [PATH:rn01110] M00979   Ajmaline biosynthesis, geissoschizine => ajmaline [PATH:rn01110] M00980   Strychnine biosynthesis, geissoschizine => strychnine [PATH:rn01110] M00981   Geissoschizine biosynthesis, tryptophan => geissoschizine [PATH:rn01110] M00989   Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:rn01110] Related pathway rn00010   Glycolysis / Gluconeogenesis rn00020   Citrate cycle (TCA cycle) rn00030   Pentose phosphate pathway rn00053   Ascorbate and aldarate metabolism rn00073   Cutin, suberine and wax biosynthesis rn00074   Mycolic acid biosynthesis rn00100   Steroid biosynthesis rn00130   Ubiquinone and other terpenoid-quinone biosynthesis rn00220   Arginine biosynthesis rn00230   Purine metabolism rn00232   Caffeine metabolism rn00250   Alanine, aspartate and glutamate metabolism rn00253   Tetracycline biosynthesis rn00254   Aflatoxin biosynthesis rn00260   Glycine, serine and threonine metabolism rn00261   Monobactam biosynthesis rn00270   Cysteine and methionine metabolism rn00280   Valine, leucine and isoleucine degradation rn00290   Valine, leucine and isoleucine biosynthesis rn00300   Lysine biosynthesis rn00311   Penicillin and cephalosporin biosynthesis rn00331   Clavulanic acid biosynthesis rn00332   Carbapenem biosynthesis rn00333   Prodigiosin biosynthesis rn00340   Histidine metabolism rn00380   Tryptophan metabolism rn00400   Phenylalanine, tyrosine and tryptophan biosynthesis rn00401   Novobiocin biosynthesis rn00402   Benzoxazinoid biosynthesis rn00403   Indole diterpene alkaloid biosynthesis rn00404   Staurosporine biosynthesis rn00405   Phenazine biosynthesis rn00440   Phosphonate and phosphinate metabolism rn00460   Cyanoamino acid metabolism rn00500   Starch and sucrose metabolism rn00521   Streptomycin biosynthesis rn00522   Biosynthesis of 12-, 14- and 16-membered macrolides rn00523   Polyketide sugar unit biosynthesis rn00524   Neomycin, kanamycin and gentamicin biosynthesis rn00525   Acarbose and validamycin biosynthesis rn00564   Glycerophospholipid metabolism rn00592   alpha-Linolenic acid metabolism rn00630   Glyoxylate and dicarboxylate metabolism rn00650   Butanoate metabolism rn00740   Riboflavin metabolism rn00770   Pantothenate and CoA biosynthesis rn00860   Porphyrin metabolism rn00900   Terpenoid backbone biosynthesis rn00901   Indole alkaloid biosynthesis rn00902   Monoterpenoid biosynthesis rn00904   Diterpenoid biosynthesis rn00905   Brassinosteroid biosynthesis rn00906   Carotenoid biosynthesis rn00908   Zeatin biosynthesis rn00909   Sesquiterpenoid and triterpenoid biosynthesis rn00940   Phenylpropanoid biosynthesis rn00941   Flavonoid biosynthesis rn00942   Anthocyanin biosynthesis rn00943   Isoflavonoid biosynthesis rn00944   Flavone and flavonol biosynthesis rn00945   Stilbenoid, diarylheptanoid and gingerol biosynthesis rn00950   Isoquinoline alkaloid biosynthesis rn00960   Tropane, piperidine and pyridine alkaloid biosynthesis rn00965   Betalain biosynthesis rn00966   Glucosinolate biosynthesis rn00996   Biosynthesis of various alkaloids rn00997   Biosynthesis of various other secondary metabolites rn00998   Biosynthesis of various antibiotics rn00999   Biosynthesis of various plant secondary metabolites rn01051   Biosynthesis of ansamycins rn01053   Biosynthesis of siderophore group nonribosomal peptides rn01055   Biosynthesis of vancomycin group antibiotics rn01056   Biosynthesis of type II polyketide backbone rn01057   Biosynthesis of type II polyketide products rn01059   Biosynthesis of enediyne antibiotics KO pathway ko01110

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