KEGG   PATHWAY: mni04622
Entry
mni04622                    Pathway                                
Name
RIG-I-like receptor signaling pathway - Macaca nemestrina (pig-tailed macaque)
Description
Specific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular viral replication is recognized by a family of cytosolic RNA helicases termed RIG-I-like receptors (RLRs). The RLR proteins include RIG-I, MDA5, and LGP2 and are expressed in both immune and nonimmune cells. Upon recognition of viral nucleic acids, RLRs recruit specific intracellular adaptor proteins to initiate signaling pathways that lead to the synthesis of type I interferon and other inflammatory cytokines, which are important for eliminating viruses.
Class
Organismal Systems; Immune system
Pathway map
mni04622  RIG-I-like receptor signaling pathway
mni04622

Organism
Macaca nemestrina (pig-tailed macaque) [GN:mni]
Gene
105485638  DDX58; probable ATP-dependent RNA helicase DDX58 isoform X1 [KO:K12646] [EC:5.6.2.6]
105483341  IFIH1; interferon-induced helicase C domain-containing protein 1 [KO:K12647] [EC:5.6.2.6]
105470736  ZNFX1; LOW QUALITY PROTEIN: NFX1-type zinc finger-containing protein 1 [KO:K27391]
105481575  MAVS; mitochondrial antiviral-signaling protein isoform X1 [KO:K12648]
105472131  DHX58; probable ATP-dependent RNA helicase DHX58 [KO:K12649] [EC:5.6.2.6]
105467377  TRAF3; TNF receptor-associated factor 3 isoform X1 [KO:K03174]
105483349  TANK; TRAF family member-associated NF-kappa-B activator [KO:K12650]
105488961  AZI2; 5-azacytidine-induced protein 2 [KO:K12651]
105472290  TBKBP1; TANK-binding kinase 1-binding protein 1 isoform X1 [KO:K12652]
105471007  LOW QUALITY PROTEIN: NF-kappa-B essential modulator-like [KO:K07210]
105473459  TBK1; serine/threonine-protein kinase TBK1 [KO:K05410] [EC:2.7.11.10]
105484842  IKBKE; inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1 [KO:K07211] [EC:2.7.11.10]
105497189  IRF3; interferon regulatory factor 3 isoform X1 [KO:K05411]
105494145  IRF7; interferon regulatory factor 7 isoform X1 [KO:K09447]
105465888  IFNA21; LOW QUALITY PROTEIN: interferon alpha-21 [KO:K05414]
105498418  interferon alpha-1/13-like [KO:K05414]
105498422  IFNA8; interferon alpha-8 [KO:K05414]
105498424  interferon alpha-6 [KO:K05414]
105498425  interferon alpha-1/13 [KO:K05414]
105498426  interferon alpha-2 [KO:K05414]
105498430  interferon alpha-4 [KO:K05414]
105465886  IFNB1; interferon beta [KO:K05415]
105465887  IFNW1; interferon omega-1 [KO:K05440]
105498427  interferon alpha-1-like [KO:K05440]
105498421  IFNE; interferon epsilon isoform X1 [KO:K05442]
105493866  IFNK; interferon kappa [KO:K05441]
105491441  TRADD; tumor necrosis factor receptor type 1-associated DEATH domain protein isoform X2 [KO:K03171]
105469733  FADD; FAS-associated death domain protein [KO:K02373]
105487318  RIPK1; receptor-interacting serine/threonine-protein kinase 1 isoform X1 [KO:K02861] [EC:2.7.11.1]
105468105  CASP8; caspase-8 isoform X1 [KO:K04398] [EC:3.4.22.61]
105468106  CASP10; caspase-10 isoform X1 [KO:K04400] [EC:3.4.22.63]
105478402  CHUK; inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1 [KO:K04467] [EC:2.7.11.10]
105476527  IKBKB; inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1 [KO:K07209] [EC:2.7.11.10]
105495392  NFKBIB; NF-kappa-B inhibitor beta isoform X1 [KO:K02581]
105477978  NFKBIA; NF-kappa-B inhibitor alpha [KO:K04734]
105486337  NFKB1; nuclear factor NF-kappa-B p105 subunit isoform X3 [KO:K02580]
105469585  RELA; transcription factor p65 isoform X1 [KO:K04735]
105471953  TRAF2; TNF receptor-associated factor 2 isoform X1 [KO:K03173] [EC:2.3.2.27]
105496641  MAP3K7; mitogen-activated protein kinase kinase kinase 7 isoform X1 [KO:K04427] [EC:2.7.11.25]
105471571  TRAF6; TNF receptor-associated factor 6 [KO:K03175] [EC:2.3.2.27]
105499405  MAP3K1; mitogen-activated protein kinase kinase kinase 1 isoform X1 [KO:K04416] [EC:2.7.11.25]
105486663  MAPK8; mitogen-activated protein kinase 8 isoform X1 [KO:K04440] [EC:2.7.11.24]
105479668  MAPK10; mitogen-activated protein kinase 10 isoform X1 [KO:K04440] [EC:2.7.11.24]
105484084  MAPK9; mitogen-activated protein kinase 9 [KO:K04440] [EC:2.7.11.24]
105474512  MAPK14; mitogen-activated protein kinase 14 isoform X1 [KO:K04441] [EC:2.7.11.24]
105474514  MAPK13; mitogen-activated protein kinase 13 isoform X1 [KO:K04441] [EC:2.7.11.24]
105489757  MAPK11; mitogen-activated protein kinase 11 [KO:K04441] [EC:2.7.11.24]
105489758  MAPK12; mitogen-activated protein kinase 12 isoform X1 [KO:K04441] [EC:2.7.11.24]
105477300  CXCL8; interleukin-8 precursor [KO:K10030]
105497642  TNF; tumor necrosis factor isoform X2 [KO:K03156]
105488536  IL12A; interleukin-12 subunit alpha [KO:K05406]
105482347  IL12B; interleukin-12 subunit beta [KO:K05425]
105477263  CXCL10; C-X-C motif chemokine 10 precursor [KO:K12671]
105497976  ADAR; double-stranded RNA-specific adenosine deaminase isoform X1 [KO:K12968] [EC:3.5.4.37]
105476789  TRIM25; E3 ubiquitin/ISG15 ligase TRIM25 [KO:K10652] [EC:2.3.2.27]
105492255  CYLD; ubiquitin carboxyl-terminal hydrolase CYLD isoform X1 [KO:K08601] [EC:3.4.19.12]
105498269  RNF125; E3 ubiquitin-protein ligase RNF125 [KO:K12170] [EC:2.3.2.27]
105498297  ISG15; ubiquitin-like protein ISG15 [KO:K12159]
105478775  ATG5; autophagy protein 5 isoform X1 [KO:K08339]
105500001  ATG12; ubiquitin-like protein ATG12 isoform X1 [KO:K08336]
105476376  NLRX1; NLR family member X1 isoform X1 [KO:K12653]
105467057  TMEM173; stimulator of interferon genes protein [KO:K12654]
105493915  OTUD5; LOW QUALITY PROTEIN: OTU domain-containing protein 5 [KO:K12655] [EC:3.4.19.12]
105479145  SIKE1; suppressor of IKBKE 1 isoform X1 [KO:K12656]
105463148  DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 [KO:K11594] [EC:5.6.2.7]
105478463  PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
105469398  TKFC; triokinase/FMN cyclase [KO:K00863] [EC:2.7.1.28 2.7.1.29 4.6.1.15]
Compound
C00046  RNA
Reference
  Authors
Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, Miyagishi M, Taira K, Akira S, Fujita T
  Title
The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
  Journal
Nat Immunol 5:730-7 (2004)
DOI:10.1038/ni1087
Reference
  Authors
Takeuchi O, Akira S
  Title
MDA5/RIG-I and virus recognition.
  Journal
Curr Opin Immunol 20:17-22 (2008)
DOI:10.1016/j.coi.2008.01.002
Reference
  Authors
Yoneyama M, Fujita T
  Title
RNA recognition and signal transduction by RIG-I-like receptors.
  Journal
Immunol Rev 227:54-65 (2009)
DOI:10.1111/j.1600-065X.2008.00727.x
Reference
  Authors
Nakhaei P, Genin P, Civas A, Hiscott J
  Title
RIG-I-like receptors: sensing and responding to RNA virus infection.
  Journal
Semin Immunol 21:215-22 (2009)
DOI:10.1016/j.smim.2009.05.001
Reference
  Authors
Moore CB, Ting JP
  Title
Regulation of mitochondrial antiviral signaling pathways.
  Journal
Immunity 28:735-9 (2008)
DOI:10.1016/j.immuni.2008.05.005
Reference
  Authors
Barral PM, Sarkar D, Su ZZ, Barber GN, DeSalle R, Racaniello VR, Fisher PB
  Title
Functions of the cytoplasmic RNA sensors RIG-I and MDA-5: key regulators of innate immunity.
  Journal
Pharmacol Ther 124:219-34 (2009)
DOI:10.1016/j.pharmthera.2009.06.012
Reference
  Authors
Schlee M, Hartmann E, Coch C, Wimmenauer V, Janke M, Barchet W, Hartmann G
  Title
Approaching the RNA ligand for RIG-I?
  Journal
Immunol Rev 227:66-74 (2009)
DOI:10.1111/j.1600-065X.2008.00724.x
Reference
  Authors
Saito T, Gale M Jr
  Title
Differential recognition of double-stranded RNA by RIG-I-like receptors in antiviral immunity.
  Journal
J Exp Med 205:1523-7 (2008)
DOI:10.1084/jem.20081210
Reference
  Authors
Kawai T, Akira S
  Title
Toll-like receptor and RIG-I-like receptor signaling.
  Journal
Ann N Y Acad Sci 1143:1-20 (2008)
DOI:10.1196/annals.1443.020
Reference
  Authors
Michallet MC, Meylan E, Ermolaeva MA, Vazquez J, Rebsamen M, Curran J, Poeck H, Bscheider M, Hartmann G, Konig M, Kalinke U, Pasparakis M, Tschopp J
  Title
TRADD protein is an essential component of the RIG-like helicase antiviral pathway.
  Journal
Immunity 28:651-61 (2008)
DOI:10.1016/j.immuni.2008.03.013
Reference
  Authors
Yoshida R, Takaesu G, Yoshida H, Okamoto F, Yoshioka T, Choi Y, Akira S, Kawai T, Yoshimura A, Kobayashi T
  Title
TRAF6 and MEKK1 play a pivotal role in the RIG-I-like helicase antiviral pathway.
  Journal
J Biol Chem 283:36211-20 (2008)
DOI:10.1074/jbc.M806576200
Reference
  Authors
Mikkelsen SS, Jensen SB, Chiliveru S, Melchjorsen J, Julkunen I, Gaestel M, Arthur JS, Flavell RA, Ghosh S, Paludan SR
  Title
RIG-I-mediated activation of p38 MAPK is essential for viral induction of interferon and activation of dendritic cells: dependence on TRAF2 and TAK1.
  Journal
J Biol Chem 284:10774-82 (2009)
DOI:10.1074/jbc.M807272200
Reference
  Authors
Liu G, Gack MU
  Title
Distinct and Orchestrated Functions of RNA Sensors in Innate Immunity.
  Journal
Immunity 53:26-42 (2020)
DOI:10.1016/j.immuni.2020.03.017
Related
pathway
mni04010  MAPK signaling pathway
mni04120  Ubiquitin mediated proteolysis
mni04210  Apoptosis
mni04630  JAK-STAT signaling pathway
KO pathway
ko04622   
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