KEGG   PATHWAY: oha04820
Entry
oha04820                    Pathway                                
Name
Cytoskeleton in muscle cells - Opisthocomus hoazin (hoatzin)
Class
Cellular Processes; Cell motility
Pathway map
oha04820  Cytoskeleton in muscle cells
oha04820

Organism
Opisthocomus hoazin (hoatzin) [GN:oha]
Gene
104330886  COL1A2; collagen alpha-2(I) chain [KO:K06236]
104328415  COL3A1; collagen alpha-1(III) chain [KO:K19720]
104328414  COL5A2; collagen alpha-2(V) chain [KO:K19721]
104329694  COL11A1; collagen alpha-1(XI) chain [KO:K19721]
104330221  COL27A1; LOW QUALITY PROTEIN: collagen alpha-1(XXVII) chain [KO:K19721]
104338878  COL24A1; LOW QUALITY PROTEIN: collagen alpha-1(XXIV) chain [KO:K19721]
104336601  COL5A1; collagen alpha-1(V) chain [KO:K19721]
104328890  COL9A3; collagen alpha-3(IX) chain [KO:K08131]
104334791  COL9A1; collagen alpha-1(IX) chain [KO:K08131]
104334470  DCN; decorin [KO:K04660]
104327804  COL6A3; collagen alpha-3(VI) chain [KO:K06238]
104332670  COL6A6; LOW QUALITY PROTEIN: collagen alpha-6(VI) chain [KO:K06238]
104338820  COL6A2; collagen alpha-2(VI) chain [KO:K06238]
104338829  COL6A1; LOW QUALITY PROTEIN: collagen alpha-1(VI) chain [KO:K06238]
104326976  THBS1; thrombospondin-1 [KO:K16857]
104331052  THBS4; thrombospondin-4 [KO:K04659]
104327353  COMP; cartilage oligomeric matrix protein [KO:K04659]
104335566  THBS2; thrombospondin-2 [KO:K04659]
104334594  FBN1; fibrillin-1 [KO:K06825]
104330848  FBN3; LOW QUALITY PROTEIN: fibrillin-3 [KO:K23342]
104329999  FBN2; fibrillin-2 isoform X1 [KO:K23342]
104328470  COL4A1; collagen alpha-1(IV) chain [KO:K06237]
104328471  COL4A2; LOW QUALITY PROTEIN: collagen alpha-2(IV) chain [KO:K06237]
104337995  COL4A3; collagen alpha-3(IV) chain [KO:K06237]
104337996  COL4A4; LOW QUALITY PROTEIN: collagen alpha-4(IV) chain [KO:K06237]
104339081  COL4A5; collagen alpha-5(IV) chain [KO:K06237]
104339106  COL4A6; collagen alpha-6(IV) chain [KO:K06237]
104328711  FBLN1; fibulin-1 isoform X1 [KO:K17307]
104335228  FBLN2; fibulin-2 [KO:K17307]
104328304  NID1; LOW QUALITY PROTEIN: nidogen-1 [KO:K06826]
104327807  FN1; fibronectin [KO:K05717]
104333820  SDC1; syndecan-1 [KO:K06257]
104337593  SDC2; syndecan-2 [KO:K16336]
104335922  SDC3; syndecan-3 [KO:K16337]
104331322  SDC4; syndecan-4 [KO:K16338]
104336065  AGRN; agrin [KO:K06254]
104329171  DSG2; desmoglein-2 [KO:K07597]
104336043  PKP2; plakophilin-2 [KO:K12642]
104326652  DSP; desmoplakin [KO:K10381]
104332528  VIM; vimentin [KO:K07606]
104327094  LAMA2; LOW QUALITY PROTEIN: laminin subunit alpha-2 [KO:K05637]
104326629  LAMA1; laminin subunit alpha-1 [KO:K05637]
104337778  ITGA1; integrin alpha-1 [KO:K06480]
104337779  ITGA2; integrin alpha-2 [KO:K06481]
104331934  ITGA4; LOW QUALITY PROTEIN: integrin alpha-4 [KO:K06483]
104328971  ITGA6; integrin alpha-6 [KO:K06485]
104332532  ITGA8; integrin alpha-8 [KO:K06584]
104337176  ITGA9; integrin alpha-9 [KO:K06585]
104333276  ITGA11; LOW QUALITY PROTEIN: integrin alpha-11 [KO:K06587]
104328416  ITGAV; integrin alpha-V [KO:K06487]
104339016  ITGB1; integrin beta-1 [KO:K05719]
104338680  ITGB3; LOW QUALITY PROTEIN: integrin beta-3 [KO:K06493]
104337266  ITGB4; integrin beta-4 [KO:K06525]
104336304  ITGB5; integrin beta-5 [KO:K06588]
104329055  ITGB6; integrin beta-6 [KO:K06589]
104326563  ITGB8; integrin beta-8 [KO:K06591]
104337398  TLN2; talin-2 [KO:K06271]
104337734  TLN1; LOW QUALITY PROTEIN: talin-1 [KO:K06271]
104335802  VCL; vinculin [KO:K05700]
104328293  ACTN2; alpha-actinin-2 isoform X1 [KO:K21073]
104330516  ACTB; actin, cytoplasmic 1 isoform X1 [KO:K05692]
104330628  actin, cytoplasmic type 5 isoform X1 [KO:K05692]
104334680  actin, cytoplasmic 2-like [KO:K05692]
104331283  actin, gamma-enteric smooth muscle-like [KO:K12315]
104339554  DAG1; LOW QUALITY PROTEIN: dystroglycan [KO:K06265]
104330883  SGCE; epsilon-sarcoglycan [KO:K27061]
104334914  SGCB; beta-sarcoglycan [KO:K12566]
104336746  SGCD; delta-sarcoglycan [KO:K12563]
104337299  SGCG; gamma-sarcoglycan [KO:K12564]
104334902  SGCZ; zeta-sarcoglycan [KO:K27062]
104335262  SSPN; LOW QUALITY PROTEIN: sarcospan [KO:K22194]
104338658  DMD; dystrophin [KO:K10366]
104336859  SNTB1; beta-1-syntrophin [KO:K24064]
104329149  DTNA; LOW QUALITY PROTEIN: dystrobrevin alpha [KO:K26998]
104335838  ATP1A1; sodium/potassium-transporting ATPase subunit alpha-1 [KO:K01539] [EC:7.2.2.13]
104327190  ATP1B3; sodium/potassium-transporting ATPase subunit beta-3 [KO:K01540]
104329551  ATP1B4; protein ATP1B4 [KO:K01540]
104333922  ATP1B1; sodium/potassium-transporting ATPase subunit beta-1 [KO:K01540]
104329932  ANK3; ankyrin-3 [KO:K09259]
104329396  SPTAN1; spectrin alpha chain, non-erythrocytic 1 isoform X1 [KO:K06114]
104326529  SPTBN1; spectrin beta chain, non-erythrocytic 1 isoform X1 [KO:K06115]
104328114  SPTBN5; LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 5 [KO:K06115]
104338445  SPTBN4; LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4 [KO:K06115]
104330748  CSRP3; cysteine and glycine-rich protein 3 [KO:K09377]
104326789  CSRP2; cysteine and glycine-rich protein 2 [KO:K09377]
104337050  CSRP1; cysteine and glycine-rich protein 1 isoform X1 [KO:K09377]
104330261  myosin-3 isoform X1 [KO:K24220]
104330319  LOW QUALITY PROTEIN: myosin-1-like [KO:K24220]
104330330  LOW QUALITY PROTEIN: myosin heavy chain, skeletal muscle, adult-like [KO:K24220]
104330341  LOW QUALITY PROTEIN: myosin-13-like [KO:K24220]
104332599  LOW QUALITY PROTEIN: myosin-1-like [KO:K24220]
104338366  MYH7B; LOW QUALITY PROTEIN: myosin-7B [KO:K24220]
104333862  MYH15; myosin-15 isoform X1 [KO:K24220]
104332151  myosin-7-like [KO:K17751]
104331014  MYH11; myosin-11 isoform X1 [KO:K10352]
104338023  MYH9; myosin-9 isoform X1 [KO:K10352]
104338573  MYL1; myosin light chain 1/3, skeletal muscle isoform isoform X1 [KO:K05738]
104332875  MYL3; myosin light chain 3 [KO:K12749]
104338689  MYL4; myosin light chain 4 [KO:K12750]
104335849  MYL2; myosin regulatory light chain 2, ventricular/cardiac muscle isoform [KO:K10351]
104333122  myosin regulatory light polypeptide 9 isoform X1 [KO:K12755]
104338299  MYBPC1; myosin-binding protein C, slow-type [KO:K12557]
104328143  MYBPC3; LOW QUALITY PROTEIN: myosin-binding protein C, cardiac-type [KO:K12568]
104337070  MYBPH; LOW QUALITY PROTEIN: myosin-binding protein H [KO:K24494]
104332605  ACTA1; LOW QUALITY PROTEIN: actin, alpha skeletal muscle [KO:K10354]
104338997  ACTC1; actin, alpha cardiac muscle 1 [KO:K12314]
104336625  TNNC1; troponin C, slow skeletal and cardiac muscles [KO:K05865]
104337051  TNNI1; troponin I, slow skeletal muscle [KO:K10371]
104330124  TNNI2; troponin I, fast skeletal muscle [KO:K12043]
104330122  TNNT3; troponin T, fast skeletal muscle isoform X1 [KO:K12046]
104337052  TNNT2; troponin T, cardiac muscle [KO:K12045]
104337400  TPM1; tropomyosin alpha-1 chain isoform X1 [KO:K10373]
104337661  TPM2; tropomyosin beta chain [KO:K10374]
104332893  tropomyosin alpha-3 chain isoform X1 [KO:K09290]
104327978  TPM4; tropomyosin alpha-4 chain [KO:K10375]
104329015  TTN; LOW QUALITY PROTEIN: titin [KO:K12567] [EC:2.7.11.1]
104326877  MYOT; myotilin isoform X1 [KO:K19875]
104331195  SYNPO2; synaptopodin-2 [KO:K24066]
104331745  NEB; LOW QUALITY PROTEIN: nebulin [KO:K18267]
104332493  NEBL; nebulette [KO:K25865]
104331206  MYOZ2; myozenin-2 isoform X1 [KO:K26050]
104326929  MYOZ3; LOW QUALITY PROTEIN: myozenin-3 [KO:K26050]
104335784  MYOZ1; myozenin-1 isoform X1 [KO:K26050]
104327510  PDLIM4; PDZ and LIM domain protein 4 [KO:K23353]
104334548  PDLIM3; PDZ and LIM domain protein 3 [KO:K23353]
104335790  PDLIM1; PDZ and LIM domain protein 1 [KO:K23353]
104337130  CAPZA3; LOW QUALITY PROTEIN: F-actin-capping protein subunit alpha-3 [KO:K10364]
104337501  CAPZA2; F-actin-capping protein subunit alpha-2 [KO:K10364]
104338727  CAPZA1; F-actin-capping protein subunit alpha-1 [KO:K10364]
104335959  CAPZB; F-actin-capping protein subunit beta [KO:K10365]
104337184  XIRP1; xin actin-binding repeat-containing protein 1 [KO:K27381]
104329490  NRAP; nebulin-related-anchoring protein isoform X1 [KO:K24421]
104338387  MYPN; myopalladin [KO:K22028]
104329942  LDB3; LIM domain-binding protein 3 isoform X1 [KO:K19867]
104331639  PDLIM5; LOW QUALITY PROTEIN: PDZ and LIM domain protein 5 [KO:K19867]
104338453  TMOD1; tropomodulin-1 [KO:K10370]
104334580  TMOD3; tropomodulin-3 [KO:K10370]
104334581  TMOD2; tropomodulin-2 isoform X1 [KO:K10370]
104327127  ZYX; zyxin [KO:K06273]
104335692  FHL1; four and a half LIM domains protein 1 isoform X1 [KO:K14365]
104335281  FHL2; four and a half LIM domains protein 2 [KO:K14380]
104334653  FHL3; four and a half LIM domains protein 3 [KO:K24414]
104331346  LMOD3; LOW QUALITY PROTEIN: leiomodin-3 [KO:K22030]
104330031  LMOD2; LOW QUALITY PROTEIN: leiomodin-2 [KO:K22030]
104337074  LMOD1; LOW QUALITY PROTEIN: leiomodin-1 [KO:K22030]
104330469  ANKRD1; ankyrin repeat domain-containing protein 1 [KO:K21433]
104331756  FMNL2; formin-like protein 2 [KO:K23957]
104335296  inverted formin-2-like [KO:K23958]
104326670  DAAM2; disheveled-associated activator of morphogenesis 2 isoform X1 [KO:K04512]
104331835  DIAPH2; protein diaphanous homolog 2 [KO:K05741]
104328629  DIAPH3; protein diaphanous homolog 3 [KO:K05745]
104328309  FMN2; LOW QUALITY PROTEIN: formin-2 [KO:K02184]
104326646  MYOM1; LOW QUALITY PROTEIN: myomesin-1 [KO:K24495]
104326301  MYOM3; myomesin-3 [KO:K24495]
104338248  MYOM2; myomesin-2 [KO:K24495]
104327134  ENO2; gamma-enolase isoform X1 [KO:K01689] [EC:4.2.1.11]
104336058  ENO1; alpha-enolase isoform X1 [KO:K01689] [EC:4.2.1.11]
104336725  ANK2; ankyrin-2 [KO:K09255]
104334828  TRIM55; tripartite motif-containing protein 55 isoform X1 [KO:K10654]
104326497  AMPD3; LOW QUALITY PROTEIN: AMP deaminase 3 [KO:K01490] [EC:3.5.4.6]
104333532  AMPD1; AMP deaminase 1 [KO:K01490] [EC:3.5.4.6]
104336379  AMPD2; AMP deaminase 2 [KO:K01490] [EC:3.5.4.6]
104326255  OBSCN; obscurin [KO:K17531] [EC:2.7.11.1]
104328119  CAPN3; calpain-3 isoform X1 [KO:K08573] [EC:3.4.22.54]
104331556  SYNE3; LOW QUALITY PROTEIN: nesprin-3 [KO:K21761]
104328700  SYNE1; LOW QUALITY PROTEIN: nesprin-1 [KO:K19326]
104330067  nesprin-2-like [KO:K19346]
104329858  SUN2; SUN domain-containing protein 2 [KO:K19347]
104329992  TMEM43; transmembrane protein 43 [KO:K27488]
104331966  LBR; lamin-B receptor [KO:K19532] [EC:1.3.1.70]
104338404  LMNA; lamin [KO:K12641]
104330002  LMNB1; lamin-B1 [KO:K07611]
104330523  LMNB2; lamin-B2 [KO:K07611]
104334647  lamin-L(III)-like [KO:K07611]
Reference
  Authors
Clark KA, McElhinny AS, Beckerle MC, Gregorio CC
  Title
Striated muscle cytoarchitecture: an intricate web of form and function.
  Journal
Annu Rev Cell Dev Biol 18:637-706 (2002)
DOI:10.1146/annurev.cellbio.18.012502.105840
Reference
  Authors
Mukund K, Subramaniam S
  Title
Skeletal muscle: A review of molecular structure and function, in health and disease.
  Journal
Wiley Interdiscip Rev Syst Biol Med 12:e1462 (2020)
DOI:10.1002/wsbm.1462
Reference
  Authors
Stroud MJ, Banerjee I, Veevers J, Chen J
  Title
Linker of nucleoskeleton and cytoskeleton complex proteins in cardiac structure, function, and disease.
  Journal
Circ Res 114:538-48 (2014)
DOI:10.1161/CIRCRESAHA.114.301236
Reference
  Authors
Henderson CA, Gomez CG, Novak SM, Mi-Mi L, Gregorio CC
  Title
Overview of the Muscle Cytoskeleton.
  Journal
Compr Physiol 7:891-944 (2017)
DOI:10.1002/cphy.c160033
Reference
  Authors
Csapo R, Gumpenberger M, Wessner B
  Title
Skeletal Muscle Extracellular Matrix - What Do We Know About Its Composition, Regulation, and Physiological Roles? A Narrative Review.
  Journal
Front Physiol 11:253 (2020)
DOI:10.3389/fphys.2020.00253
Reference
  Authors
Pinch M, Guth R, Samanta MP, Chaidez A, Unguez GA
  Title
The myogenic electric organ of Sternopygus macrurus: a non-contractile tissue with a skeletal muscle transcriptome.
  Journal
PeerJ 4:e1828 (2016)
DOI:10.7717/peerj.1828
Reference
  Authors
Sequeira V, Nijenkamp LL, Regan JA, van der Velden J
  Title
The physiological role of cardiac cytoskeleton and its alterations in heart failure.
  Journal
Biochim Biophys Acta 1838:700-22 (2014)
DOI:10.1016/j.bbamem.2013.07.011
Reference
  Authors
Zhang B, Powers JD, McCulloch AD, Chi NC
  Title
Nuclear mechanosignaling in striated muscle diseases.
  Journal
Front Physiol 14:1126111 (2023)
DOI:10.3389/fphys.2023.1126111
Reference
  Authors
Al-Amoudi A, Castano-Diez D, Devos DP, Russell RB, Johnson GT, Frangakis AS
  Title
The three-dimensional molecular structure of the desmosomal plaque.
  Journal
Proc Natl Acad Sci U S A 108:6480-5 (2011)
DOI:10.1073/pnas.1019469108
Reference
  Authors
Sikora M, Ermel UH, Seybold A, Kunz M, Calloni G, Reitz J, Vabulas RM, Hummer G, Frangakis AS
  Title
Desmosome architecture derived from molecular dynamics simulations and cryo-electron tomography.
  Journal
Proc Natl Acad Sci U S A 117:27132-27140 (2020)
DOI:10.1073/pnas.2004563117
Reference
  Authors
Xu XP, Kim E, Swift M, Smith JW, Volkmann N, Hanein D
  Title
Three-Dimensional Structures of Full-Length, Membrane-Embedded Human alpha(IIb)beta(3) Integrin Complexes.
  Journal
Biophys J 110:798-809 (2016)
DOI:10.1016/j.bpj.2016.01.016
Reference
  Authors
Wang W, Shi Z, Jiao S, Chen C, Wang H, Liu G, Wang Q, Zhao Y, Greene MI, Zhou Z
  Title
Structural insights into SUN-KASH complexes across the nuclear envelope.
  Journal
Cell Res 22:1440-52 (2012)
DOI:10.1038/cr.2012.126
Reference
  Authors
Sosa BA, Kutay U, Schwartz TU
  Title
Structural insights into LINC complexes.
  Journal
Curr Opin Struct Biol 23:285-91 (2013)
DOI:10.1016/j.sbi.2013.03.005
Reference
  Authors
Cruz VE, Esra Demircioglu F, Schwartz TU
  Title
Structural Analysis of Different LINC Complexes Reveals Distinct Binding Modes.
  Journal
J Mol Biol 432:6028-6041 (2020)
DOI:10.1016/j.jmb.2020.09.019
Reference
  Authors
Schuler SC, Liu Y, Dumontier S, Grandbois M, Le Moal E, Cornelison D, Bentzinger CF
  Title
Extracellular matrix: Brick and mortar in the skeletal muscle stem cell niche.
  Journal
Front Cell Dev Biol 10:1056523 (2022)
DOI:10.3389/fcell.2022.1056523
Reference
  Authors
Brull A, Morales Rodriguez B, Bonne G, Muchir A, Bertrand AT
  Title
The Pathogenesis and Therapies of Striated Muscle Laminopathies.
  Journal
Front Physiol 9:1533 (2018)
DOI:10.3389/fphys.2018.01533
Reference
  Authors
Storey EC, Fuller HR
  Title
Genotype-Phenotype Correlations in Human Diseases Caused by Mutations of LINC Complex-Associated Genes: A Systematic Review and Meta-Summary.
  Journal
Cells 11:cells11244065 (2022)
DOI:10.3390/cells11244065
Related
pathway
oha04512  ECM-receptor interaction
oha04814  Motor proteins
KO pathway
ko04820   
LinkDB

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